RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 IRAK4Q9NWZ3 460 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 IL1RAPL1Q9NZN1 696 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 KCND2Q9NZV8 630 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 CDH22Q9UJ99 828 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 BTBD3Q9Y2F9 522 aa6.09□□□□□ -1.43
SF3B1-210ENST00000482158 ZMYM2Q9UBW7 1377 aa6.08□□□□□ -1.44
SF3B1-210ENST00000482158 CBY3A6NI87 242 aa6.08□□□□□ -1.44
SF3B1-210ENST00000482158 IFNL4K9M1U5 179 aa6.08□□□□□ -1.44
SF3B1-210ENST00000482158 TGFB1I1O43294 461 aa6.08□□□□□ -1.44
SF3B1-210ENST00000482158 IL1AP01583 271 aa6.08□□□□□ -1.44
SF3B1-210ENST00000482158 CHRNB1P11230 501 aa6.08□□□□□ -1.44
SF3B1-210ENST00000482158 COX7A2P14406 83 aa6.08□□□□□ -1.44
SF3B1-210ENST00000482158 RGS2P41220 211 aa6.08□□□□□ -1.44
SF3B1-210ENST00000482158 BLKP51451 505 aa6.08□□□□□ -1.44
SF3B1-210ENST00000482158 CCR9P51686 369 aa6.08□□□□□ -1.44
SF3B1-210ENST00000482158 CLCNKBP51801 687 aa6.08□□□□□ -1.44
SF3B1-210ENST00000482158 C21orf58P58505 322 aa6.08□□□□□ -1.44
SF3B1-210ENST00000482158 CYP4A11Q02928 519 aa6.08□□□□□ -1.44
SF3B1-210ENST00000482158 TRIP6Q15654 476 aaKnown RBP6.08□□□□□ -1.44
SF3B1-210ENST00000482158 MTX3Q5HYI7 312 aa6.08□□□□□ -1.44
SF3B1-210ENST00000482158 C6orf10Q5SRN2 563 aa6.08□□□□□ -1.44
SF3B1-210ENST00000482158 IL20RBQ6UXL0 311 aa6.08□□□□□ -1.44
SF3B1-210ENST00000482158 ANKRD13BQ86YJ7 626 aa6.08□□□□□ -1.44
SF3B1-210ENST00000482158 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.08□□□□□ -1.44
SF3B1-210ENST00000482158 KCNG4Q8TDN1 519 aa6.08□□□□□ -1.44
SF3B1-210ENST00000482158 MAP6D1Q9H9H5 199 aa6.08□□□□□ -1.44
SF3B1-210ENST00000482158 VEZTQ9HBM0 779 aa6.08□□□□□ -1.44
SF3B1-210ENST00000482158 ENTPD7Q9NQZ7 604 aa6.08□□□□□ -1.44
SF3B1-210ENST00000482158 RNF146Q9NTX7 359 aa6.08□□□□□ -1.44
SF3B1-210ENST00000482158 A0A087X0M5 115 aa6.07□□□□□ -1.44
SF3B1-210ENST00000482158 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.07□□□□□ -1.44
SF3B1-210ENST00000482158 A0A1B0GX30 115 aa6.07□□□□□ -1.44
SF3B1-210ENST00000482158 TACC1O75410 805 aa6.07□□□□□ -1.44
SF3B1-210ENST00000482158 BAIAP3O94812 1187 aa6.07□□□□□ -1.44
SF3B1-210ENST00000482158 FGF2P09038 288 aa6.07□□□□□ -1.44
SF3B1-210ENST00000482158 UBL4AP11441 157 aa6.07□□□□□ -1.44
SF3B1-210ENST00000482158 TNFSF8P32971 234 aa6.07□□□□□ -1.44
SF3B1-210ENST00000482158 MAN1A1P33908 653 aa6.07□□□□□ -1.44
SF3B1-210ENST00000482158 HARS2P49590 506 aaKnown RBP6.07□□□□□ -1.44
SF3B1-210ENST00000482158 SRSF1Q07955 248 aaKnown RBP eCLIP6.07□□□□□ -1.44
SF3B1-210ENST00000482158 MORN5Q5VZ52 161 aa6.07□□□□□ -1.44
SF3B1-210ENST00000482158 FAM160B2Q86V87 743 aa6.07□□□□□ -1.44
SF3B1-210ENST00000482158 GDPD5Q8WTR4 605 aa6.07□□□□□ -1.44
SF3B1-210ENST00000482158 TMEM170AQ8WVE7 144 aa6.07□□□□□ -1.44
SF3B1-210ENST00000482158 UCMAQ8WVF2 138 aa6.07□□□□□ -1.44
SF3B1-210ENST00000482158 KIF1BPQ96EK5 621 aa6.07□□□□□ -1.44
SF3B1-210ENST00000482158 ZFYVE19Q96K21 471 aa6.07□□□□□ -1.44
SF3B1-210ENST00000482158 KLHL15Q96M94 604 aa6.07□□□□□ -1.44
SF3B1-210ENST00000482158 GLIS2Q9BZE0 524 aaPredicted RBP6.07□□□□□ -1.44
SF3B1-210ENST00000482158 WDR6Q9NNW5 1121 aaKnown RBP6.07□□□□□ -1.44
SF3B1-210ENST00000482158 PCDHB16Q9NRJ7 776 aa6.07□□□□□ -1.44
SF3B1-210ENST00000482158 SNTG1Q9NSN8 517 aa6.07□□□□□ -1.44
SF3B1-210ENST00000482158 OLA1Q9NTK5 396 aaKnown RBP6.07□□□□□ -1.44
SF3B1-210ENST00000482158 KIAA1456Q9P272 454 aa6.07□□□□□ -1.44
SF3B1-210ENST00000482158 HEY2Q9UBP5 337 aa6.07□□□□□ -1.44
SF3B1-210ENST00000482158 PCDHA12Q9UN75 941 aa6.07□□□□□ -1.44
SF3B1-210ENST00000482158 ZNF804BA4D1E1 1349 aa6.06□□□□□ -1.44
SF3B1-210ENST00000482158 ITIH6Q6UXX5 1313 aa6.06□□□□□ -1.44
SF3B1-210ENST00000482158 ARHGAP10A1A4S6 786 aa6.06□□□□□ -1.44
SF3B1-210ENST00000482158 NPIPB15A6NHN6 443 aaPredicted RBP6.06□□□□□ -1.44
SF3B1-210ENST00000482158 F5H0A9 414 aaPredicted RBP6.06□□□□□ -1.44
SF3B1-210ENST00000482158 RNMTO43148 476 aaKnown RBP6.06□□□□□ -1.44
SF3B1-210ENST00000482158 USO1O60763 962 aaKnown RBP6.06□□□□□ -1.44
SF3B1-210ENST00000482158 GALTP07902 379 aa6.06□□□□□ -1.44
SF3B1-210ENST00000482158 EDN2P20800 178 aa6.06□□□□□ -1.44
SF3B1-210ENST00000482158 DCAF7P61962 342 aa6.06□□□□□ -1.44
SF3B1-210ENST00000482158 LMOD3Q0VAK6 560 aa6.06□□□□□ -1.44
SF3B1-210ENST00000482158 EZH2Q15910 746 aaKnown RBP6.06□□□□□ -1.44
SF3B1-210ENST00000482158 SRSF7Q16629 238 aaKnown RBP eCLIP6.06□□□□□ -1.44
SF3B1-210ENST00000482158 TMEM71Q6P5X7 295 aa6.06□□□□□ -1.44
SF3B1-210ENST00000482158 TADA2BQ86TJ2 420 aa6.06□□□□□ -1.44
SF3B1-210ENST00000482158 SERPINA11Q86U17 422 aa6.06□□□□□ -1.44
SF3B1-210ENST00000482158 LRRC57Q8N9N7 239 aa6.06□□□□□ -1.44
SF3B1-210ENST00000482158 PRSS3P2Q8NHM4 247 aa6.06□□□□□ -1.44
SF3B1-210ENST00000482158 C16orf52Q8NHV5 167 aa6.06□□□□□ -1.44
SF3B1-210ENST00000482158 METTL6Q8TCB7 284 aa6.06□□□□□ -1.44
SF3B1-210ENST00000482158 CENPIQ92674 756 aaPredicted RBP6.06□□□□□ -1.44
SF3B1-210ENST00000482158 NRIP3Q9NQ35 241 aa6.06□□□□□ -1.44
SF3B1-210ENST00000482158 C20orf141Q9NUB4 165 aa6.06□□□□□ -1.44
SF3B1-210ENST00000482158 TAS2R10Q9NYW0 307 aa6.06□□□□□ -1.44
SF3B1-210ENST00000482158 TBC1D14Q9P2M4 693 aa6.06□□□□□ -1.44
SF3B1-210ENST00000482158 ORC3Q9UBD5 711 aaPredicted RBP6.06□□□□□ -1.44
SF3B1-210ENST00000482158 COG5Q9UP83 839 aa6.06□□□□□ -1.44
SF3B1-210ENST00000482158 COL3A1P02461 1466 aaPredicted RBP6.06□□□□□ -1.44
SF3B1-210ENST00000482158 TEX13CA0A0J9YWL9 993 aa6.05□□□□□ -1.44
SF3B1-210ENST00000482158 HSPB6O14558 160 aa6.05□□□□□ -1.44
SF3B1-210ENST00000482158 YWHAQP27348 245 aa6.05□□□□□ -1.44
SF3B1-210ENST00000482158 ICAM3P32942 547 aa6.05□□□□□ -1.44
SF3B1-210ENST00000482158 ABCD1P33897 745 aa6.05□□□□□ -1.44
SF3B1-210ENST00000482158 CENPAP49450 140 aa6.05□□□□□ -1.44
SF3B1-210ENST00000482158 KRT32Q14532 448 aa6.05□□□□□ -1.44
SF3B1-210ENST00000482158 INPP5JQ15735 1006 aaPredicted RBP6.05□□□□□ -1.44
SF3B1-210ENST00000482158 TBCEQ15813 527 aaPredicted RBP6.05□□□□□ -1.44
SF3B1-210ENST00000482158 EDRF1Q3B7T1 1238 aa6.05□□□□□ -1.44
SF3B1-210ENST00000482158 HYIQ5T013 277 aa6.05□□□□□ -1.44
SF3B1-210ENST00000482158 FAM83HQ6ZRV2 1179 aaPredicted RBP6.05□□□□□ -1.44
SF3B1-210ENST00000482158 TMTC3Q6ZXV5 915 aa6.05□□□□□ -1.44
SF3B1-210ENST00000482158 DIS3L2Q8IYB7 885 aaKnown RBP6.05□□□□□ -1.44
SF3B1-210ENST00000482158 ZDHHC23Q8IYP9 409 aa6.05□□□□□ -1.44
SF3B1-210ENST00000482158 CADM3Q8N126 398 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms