RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 TUBB2BQ9BVA1 445 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 SPATS2LQ9NUQ6 558 aaKnown RBP3.46□□□□□ -1.86
SMC6-208ENST00000481708 ING3Q9NXR8 418 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 KCMF1Q9P0J7 381 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 FAM153AQ9UHL3 310 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 ANAPC5Q9UJX4 755 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 ANAPC2Q9UJX6 822 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 APPL1Q9UKG1 709 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 PIN4Q9Y237 131 aaKnown RBP3.46□□□□□ -1.86
SMC6-208ENST00000481708 MRPS17Q9Y2R5 130 aaKnown RBP3.46□□□□□ -1.86
SMC6-208ENST00000481708 MTCL1Q9Y4B5 1905 aaKnown RBP3.46□□□□□ -1.86
SMC6-208ENST00000481708 M0QYG6 137 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 CACNB4O00305 520 aaPredicted RBP3.46□□□□□ -1.86
SMC6-208ENST00000481708 ZBTB14O43829 449 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 HGFP14210 728 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 NFKBIAP25963 317 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 CHRNA5P30532 468 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 CSF2RBP32927 897 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 NRIP1P48552 1158 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 ZNF135P52742 658 aaPredicted RBP3.46□□□□□ -1.86
SMC6-208ENST00000481708 CDH8P55286 799 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 UFM1P61960 85 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 SLFN5Q08AF3 891 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 IKZF1Q13422 519 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 RPS6KA2Q15349 733 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 DEFB115Q30KQ5 88 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 CCDC178Q5BJE1 867 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 NHSL2Q5HYW2 709 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 HIST2H2BCQ6DN03 193 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 HIST2H2BDQ6DRA6 164 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 UNC45BQ8IWX7 931 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 DNAJC10Q8IXB1 793 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 SYCP3Q8IZU3 236 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 MIGA1Q8NAN2 632 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 KDM1BQ8NB78 822 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 MISP3Q96FF7 219 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 FAM227BQ96M60 508 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 SPATA13Q96N96 652 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 PAFAH2Q99487 392 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 SIDT1Q9NXL6 827 aaKnown RBP3.46□□□□□ -1.86
SMC6-208ENST00000481708 TAS2R3Q9NYW6 316 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 MRPL15Q9P015 296 aaKnown RBP3.46□□□□□ -1.86
SMC6-208ENST00000481708 VAV3Q9UKW4 847 aa3.46□□□□□ -1.86
SMC6-208ENST00000481708 A0A1W2PRV1 198 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 GLOD5A6NK44 160 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 ZNF785A8K8V0 405 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 CTDSP2O14595 271 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 ZFYP08048 801 aaPredicted RBP3.45□□□□□ -1.86
SMC6-208ENST00000481708 SPARCP09486 303 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 TRIM21P19474 475 aaKnown RBP3.45□□□□□ -1.86
SMC6-208ENST00000481708 SLC5A2P31639 672 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 SLC15A1P46059 708 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 ZNF134P52741 427 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 METAP1P53582 386 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 RTP1P59025 263 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 ABHD18Q0P651 414 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 GPS1Q13098 491 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 PRPF4BQ13523 1007 aaKnown RBP3.45□□□□□ -1.86
SMC6-208ENST00000481708 SNTB1Q13884 538 aaKnown RBP3.45□□□□□ -1.86
SMC6-208ENST00000481708 ARHGEF7Q14155 803 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 HABP2Q14520 560 aaPredicted RBP3.45□□□□□ -1.86
SMC6-208ENST00000481708 RRS1Q15050 365 aaKnown RBP3.45□□□□□ -1.86
SMC6-208ENST00000481708 STILQ15468 1287 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 LIPMQ5VYY2 423 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 KLHL35Q6PF15 583 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 RBPMS2Q6ZRY4 209 aaKnown RBP3.45□□□□□ -1.86
SMC6-208ENST00000481708 METTL23Q86XA0 190 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 ABRAQ8N0Z2 381 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 MB21D1Q8N884 522 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 FBXO15Q8NCQ5 510 aaPredicted RBP3.45□□□□□ -1.86
SMC6-208ENST00000481708 VPS50Q96JG6 964 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 ZPBPQ9BS86 351 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 MOV10L1Q9BXT6 1211 aaKnown RBP3.45□□□□□ -1.86
SMC6-208ENST00000481708 GPR35Q9HC97 309 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 C19orf73Q9NVV2 129 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 CYP39A1Q9NYL5 469 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 CDY1Q9Y6F8 540 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 PNMA6EA0A0J9YXQ4 647 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 A0A1W2PPM1 405 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 ZBTB43O43298 467 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 TMIGD3P0DMS9 266 aaPredicted RBP3.45□□□□□ -1.86
SMC6-208ENST00000481708 PAFAH1B1P43034 410 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 AMPHP49418 695 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 CASP9P55211 416 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 PRSS36Q5K4E3 855 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 HLA-DQA1Q5Y7H0 255 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 WDR93Q6P2C0 686 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 WDR5BQ86VZ2 330 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 ULK2Q8IYT8 1036 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 SYNE4Q8N205 404 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 FBXW8Q8N3Y1 598 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 CCDC150Q8NCX0 1101 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 DYDC2Q96IM9 177 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 HIST1H2AHQ96KK5 128 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 HIST1H2AJQ99878 128 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.45□□□□□ -1.86
SMC6-208ENST00000481708 KRT23Q9C075 422 aa3.45□□□□□ -1.86
SMC6-208ENST00000481708 C11orf54Q9H0W9 315 aaPredicted RBP3.45□□□□□ -1.86
SMC6-208ENST00000481708 INTS10Q9NVR2 710 aaKnown RBP3.45□□□□□ -1.86
SMC6-208ENST00000481708 BEX4Q9NWD9 120 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms