RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 ZMYM2Q9UBW7 1377 aa4.09□□□□□ -1.75
CBX3-207ENST00000481300 KIF27Q86VH2 1401 aa4.09□□□□□ -1.75
CBX3-207ENST00000481300 FGD5Q6ZNL6 1462 aa4.09□□□□□ -1.75
CBX3-207ENST00000481300 SYNJ1O43426 1573 aa4.09□□□□□ -1.75
CBX3-207ENST00000481300 C17orf113A0A1B0GUU1 675 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 CUX2O14529 1486 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 RNMTO43148 476 aaKnown RBP4.08□□□□□ -1.76
CBX3-207ENST00000481300 ZC3H11AO75152 810 aaKnown RBP eCLIP4.08□□□□□ -1.76
CBX3-207ENST00000481300 FGBP02675 491 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 POLA1P09884 1462 aaPredicted RBP4.08□□□□□ -1.76
CBX3-207ENST00000481300 PLCD1P51178 756 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 CASP6P55212 293 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 EFNB1P98172 346 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 MPP1Q00013 466 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 MST1RQ04912 1400 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 MTX1Q13505 466 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 FBXO43Q4G163 708 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 PIK3CD-AS1Q5SR53 167 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 C10orf25Q5T742 122 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 PXDC1Q5TGL8 231 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 C11orf87Q6NUJ2 197 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 KDELC2Q7Z4H8 507 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 CHD1LQ86WJ1 897 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 RUSC2Q8N2Y8 1516 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 NANOGP1Q8N7R0 232 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 LRRC57Q8N9N7 239 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 DENND1AQ8TEH3 1009 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 WIPF2Q8TF74 440 aaPredicted RBP4.08□□□□□ -1.76
CBX3-207ENST00000481300 MPHOSPH8Q99549 860 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 CLSTN3Q9BQT9 956 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 TRMOQ9BU70 441 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 AGXT2Q9BYV1 514 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 CXorf56Q9H5V9 222 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 TASP1Q9H6P5 420 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 SPAG4Q9NPE6 437 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 ATP8A2Q9NTI2 1148 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 ZDHHC7Q9NXF8 308 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 MSRB1Q9NZV6 116 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 NLKQ9UBE8 527 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 PEMTQ9UBM1 199 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 SLC25A10Q9UBX3 287 aaPredicted RBP4.08□□□□□ -1.76
CBX3-207ENST00000481300 RAD54L2Q9Y4B4 1467 aa4.08□□□□□ -1.76
CBX3-207ENST00000481300 TOP2BQ02880 1626 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 TTBK1Q5TCY1 1321 aaPredicted RBP4.07□□□□□ -1.76
CBX3-207ENST00000481300 A0A0A0MQY5 61 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 TRBV5-7A0A0A0MS05 114 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 ARHGAP10A1A4S6 786 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 C17orf102A2RUQ5 167 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 PROB1E7EW31 1015 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 SPTLC2O15270 562 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 TLX3O43711 291 aaPredicted RBP4.07□□□□□ -1.76
CBX3-207ENST00000481300 CNOT3O75175 753 aaKnown RBP4.07□□□□□ -1.76
CBX3-207ENST00000481300 RTN3O95197 1032 aaPredicted RBP4.07□□□□□ -1.76
CBX3-207ENST00000481300 URODP06132 367 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 TNFAIP3P21580 790 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 RFC1P35251 1148 aaPredicted RBP4.07□□□□□ -1.76
CBX3-207ENST00000481300 ARL1P40616 181 aaPredicted RBP4.07□□□□□ -1.76
CBX3-207ENST00000481300 DPP6P42658 865 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 CCT4P50991 539 aaKnown RBP4.07□□□□□ -1.76
CBX3-207ENST00000481300 BLKP51451 505 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 ARSFP54793 590 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 YWHAZP63104 245 aaKnown RBP4.07□□□□□ -1.76
CBX3-207ENST00000481300 KLF9Q13886 244 aaPredicted RBP4.07□□□□□ -1.76
CBX3-207ENST00000481300 RALBP1Q15311 655 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 RBMS2Q15434 407 aaKnown RBP4.07□□□□□ -1.76
CBX3-207ENST00000481300 INPP5JQ15735 1006 aaPredicted RBP4.07□□□□□ -1.76
CBX3-207ENST00000481300 RPE65Q16518 533 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 SYTL3Q4VX76 610 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 UBAP2Q5T6F2 1119 aaKnown RBP4.07□□□□□ -1.76
CBX3-207ENST00000481300 PRSS45Q7RTY3 260 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 FAM217AQ8IXS0 508 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 C16orf52Q8NHV5 167 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 NFKBIDQ8NI38 313 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 GDPD5Q8WTR4 605 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 RFFLQ8WZ73 363 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 HDAC2Q92769 488 aaKnown RBP4.07□□□□□ -1.76
CBX3-207ENST00000481300 RPL36ALQ969Q0 106 aaKnown RBP4.07□□□□□ -1.76
CBX3-207ENST00000481300 SKA1Q96BD8 255 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 COQ8BQ96D53 544 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 MAF1Q9H063 256 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 DECR2Q9NUI1 292 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 BABAM1Q9NWV8 329 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 COG5Q9UP83 839 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 CAMK2AQ9UQM7 478 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.07□□□□□ -1.76
CBX3-207ENST00000481300 CLDN16Q9Y5I7 305 aa4.07□□□□□ -1.76
CBX3-207ENST00000481300 DNMBPQ6XZF7 1577 aa4.06□□□□□ -1.76
CBX3-207ENST00000481300 CARMIL1Q5VZK9 1371 aa4.06□□□□□ -1.76
CBX3-207ENST00000481300 A0A096LPK6 155 aa4.06□□□□□ -1.76
CBX3-207ENST00000481300 TEX13CA0A0J9YWL9 993 aa4.06□□□□□ -1.76
CBX3-207ENST00000481300 A6NNC1 897 aa4.06□□□□□ -1.76
CBX3-207ENST00000481300 B4E171 279 aa4.06□□□□□ -1.76
CBX3-207ENST00000481300 F9P00740 461 aa4.06□□□□□ -1.76
CBX3-207ENST00000481300 CD4P01730 458 aa4.06□□□□□ -1.76
CBX3-207ENST00000481300 CHRNB1P11230 501 aa4.06□□□□□ -1.76
CBX3-207ENST00000481300 UNGP13051 313 aaPredicted RBP4.06□□□□□ -1.76
CBX3-207ENST00000481300 COX7A2P14406 83 aa4.06□□□□□ -1.76
CBX3-207ENST00000481300 POU1F1P28069 291 aa4.06□□□□□ -1.76
CBX3-207ENST00000481300 TSPAN7P41732 249 aa4.06□□□□□ -1.76
CBX3-207ENST00000481300 ALDH7A1P49419 539 aaKnown RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms