RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 BNIP2Q12982 314 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 MARCH10Q8NA82 808 aaPredicted RBP9.65□□□□□ -0.86
VEGFA-212ENST00000480614 ZNF607Q96SK3 696 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 LEF1Q9UJU2 399 aaPredicted RBP9.65□□□□□ -0.86
VEGFA-212ENST00000480614 FBXO10Q9UK96 956 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 ZNF510Q9Y2H8 683 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 LTA4HP09960 611 aaKnown RBP9.65□□□□□ -0.86
VEGFA-212ENST00000480614 CAMK1Q14012 370 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 TCHHL1Q5QJ38 904 aaPredicted RBP9.65□□□□□ -0.86
VEGFA-212ENST00000480614 BICRALQ6AI39 1079 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 FBXO25Q8TCJ0 367 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 TRIM2Q9C040 744 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 C1orf232A0A0U1RR37 186 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 MANSC4A6NHS7 340 aaPredicted RBP9.65□□□□□ -0.86
VEGFA-212ENST00000480614 ZNF286BP0CG31 522 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 PRG2P13727 222 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 FAM92BQ6ZTR7 304 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 NET1Q7Z628 596 aaPredicted RBP9.65□□□□□ -0.86
VEGFA-212ENST00000480614 LMAN2LQ9H0V9 348 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 FRMPD4Q14CM0 1322 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 MSCO60682 206 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 ERVK-24P63145 666 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 RGS1Q08116 209 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 TMC3Q7Z5M5 1100 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 DDX43Q9NXZ2 648 aaKnown RBP9.65□□□□□ -0.86
VEGFA-212ENST00000480614 ERBB2P04626 1255 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 TNFRSF8P28908 595 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 RRP1BQ14684 758 aaKnown RBP9.65□□□□□ -0.86
VEGFA-212ENST00000480614 SLC27A1Q6PCB7 646 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 SPATC1LQ9H0A9 340 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 TSPAN16Q9UKR8 245 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 OR10H1Q9Y4A9 318 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 KIF1AQ12756 1690 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 RIPK2O43353 540 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 KRT33AO76009 404 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 HTR1BP28222 390 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 BCL2L1Q07817 233 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 GRB10Q13322 594 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 MAPK11Q15759 364 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 TRIM40Q6P9F5 258 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 BRSK2Q8IWQ3 736 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 CPB2Q96IY4 423 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 DSN1Q9H410 356 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 C3orf18Q9UK00 162 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 CASTOR2A6NHX0 329 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 RPA3P35244 121 aaPredicted RBP9.65□□□□□ -0.86
VEGFA-212ENST00000480614 PAN2Q504Q3 1202 aaKnown RBP9.65□□□□□ -0.86
VEGFA-212ENST00000480614 NEPROQ6NW34 567 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 CLEC10AQ8IUN9 316 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 APOL2Q9BQE5 337 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 GBA2Q9HCG7 927 aaPredicted RBP9.65□□□□□ -0.86
VEGFA-212ENST00000480614 ZNF304Q9HCX3 659 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 KCNQ5Q9NR82 932 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 EHD3Q9NZN3 535 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 ACTL7BQ9Y614 415 aa9.65□□□□□ -0.86
VEGFA-212ENST00000480614 B3GNT6Q6ZMB0 384 aa9.65□□□□□ -0.87
VEGFA-212ENST00000480614 LGI2Q8N0V4 545 aa9.65□□□□□ -0.87
VEGFA-212ENST00000480614 TEX47Q8TBZ9 253 aa9.65□□□□□ -0.87
VEGFA-212ENST00000480614 SLC9A7Q96T83 725 aa9.65□□□□□ -0.87
VEGFA-212ENST00000480614 H3BQF6 201 aa9.65□□□□□ -0.87
VEGFA-212ENST00000480614 ASGR1P07306 291 aa9.65□□□□□ -0.87
VEGFA-212ENST00000480614 CLCN5P51795 746 aa9.65□□□□□ -0.87
VEGFA-212ENST00000480614 SULT2A1Q06520 285 aa9.65□□□□□ -0.87
VEGFA-212ENST00000480614 TEFMQ96QE5 360 aaKnown RBP9.65□□□□□ -0.87
VEGFA-212ENST00000480614 EPB41L4AQ9HCS5 686 aaPredicted RBP9.65□□□□□ -0.87
VEGFA-212ENST00000480614 ARHGEF17Q96PE2 2063 aaPredicted RBP9.65□□□□□ -0.87
VEGFA-212ENST00000480614 CHRNGP07510 517 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 VIL1P09327 827 aaKnown RBP9.64□□□□□ -0.87
VEGFA-212ENST00000480614 SLC6A3Q01959 620 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 SYT12Q8IV01 421 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 REXO1L1PQ8IX06 675 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 ASAH2Q9NR71 780 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 SNCAIPQ9Y6H5 919 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 C1QTNF3-AMACRE9PGA6 284 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 OR10H2O60403 315 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 CBFA2T3O75081 653 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 IFNGP01579 166 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 CTSEP14091 401 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 ANTXR2P58335 489 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 GRM3Q14832 879 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 ADAMTSL2Q86TH1 951 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 SFRP1Q8N474 314 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 DKK3Q9UBP4 350 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 FAM50BQ9Y247 325 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 CXCL8P10145 99 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 ABRAXAS1Q6UWZ7 409 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 REPS2Q8NFH8 660 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 RIT1Q92963 219 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 PTCD3Q96EY7 689 aaKnown RBP9.64□□□□□ -0.87
VEGFA-212ENST00000480614 UROC1Q96N76 676 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 LRRC38Q5VT99 294 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 DNAJC14Q6Y2X3 702 aaPredicted RBP9.64□□□□□ -0.87
VEGFA-212ENST00000480614 TAAR1Q96RJ0 339 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 EXO5Q9H790 373 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 SMURF2Q9HAU4 748 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 A0A0A0MRY4 1105 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.64□□□□□ -0.87
VEGFA-212ENST00000480614 ACKR2O00590 384 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 NTSR2O95665 410 aa9.64□□□□□ -0.87
VEGFA-212ENST00000480614 VBP1P61758 197 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms