RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 SMUG1Q53HV7 270 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 BOLA3Q53S33 107 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 REP15Q6BDI9 236 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 CASC4Q6P4E1 433 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 AGMOQ6ZNB7 445 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 PLEKHG7Q6ZR37 379 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 VASH1Q7L8A9 365 aaPredicted RBP10.79□□□□□ -0.68
SIK3-210ENST00000480468 CMC1Q7Z7K0 106 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 SFRP1Q8N474 314 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 LILRB4Q8NHJ6 448 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 CANT1Q8WVQ1 401 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 ARNTL2Q8WYA1 636 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 TXNDC15Q96J42 360 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 APBA2Q99767 749 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 HERC2P3Q9BVR0 1158 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 COA1Q9GZY4 146 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 MRPL46Q9H2W6 279 aaKnown RBP10.79□□□□□ -0.68
SIK3-210ENST00000480468 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.79□□□□□ -0.682e-6■□□□□ 8.9
SIK3-210ENST00000480468 IFT80Q9P2H3 777 aaPredicted RBP10.79□□□□□ -0.68
SIK3-210ENST00000480468 TJP2Q9UDY2 1190 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 VPS51Q9UID3 782 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 POU2F3Q9UKI9 436 aa10.79□□□□□ -0.68
SIK3-210ENST00000480468 A0A096LPK6 155 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 DDTLA6NHG4 134 aaPredicted RBP10.78□□□□□ -0.68
SIK3-210ENST00000480468 CENPBD1B2RD01 187 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 H0YAE9 185 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 PRPSAP2O60256 369 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 DGAT1O75907 488 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 FCGR1AP12314 374 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 FASP25445 335 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 GRIA4P48058 902 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 CDC20Q12834 499 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 MTMR1Q13613 665 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 SQLEQ14534 574 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 INPP5AQ14642 412 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 CYBRD1Q53TN4 286 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 SPANXN3Q5MJ09 141 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 ZBTB41Q5SVQ8 909 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 BROXQ5VW32 411 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 SLX4IPQ5VYV7 408 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 CYP2R1Q6VVX0 501 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 GK5Q6ZS86 529 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 ERO1BQ86YB8 467 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 HACE1Q8IYU2 909 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 TTLL6Q8N841 843 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 LEMD2Q8NC56 503 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 PCDH19Q8TAB3 1148 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 CHURC1Q8WUH1 139 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 CYGBQ8WWM9 190 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 BTN2A3PQ96KV6 586 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 CPXM1Q96SM3 734 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 TBCBQ99426 244 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 ZNF670Q9BS34 389 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 IDI2Q9BXS1 227 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 FANCEQ9HB96 536 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 SMPD3Q9NY59 655 aaPredicted RBP10.78□□□□□ -0.68
SIK3-210ENST00000480468 ZDHHC2Q9UIJ5 367 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 TIMM22Q9Y584 194 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 RNF103-CHMP3A0A140T963 221 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 M0QX08 132 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 SDHDO14521 159 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 ACOX3O15254 700 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 PHGDHO43175 533 aaKnown RBP10.78□□□□□ -0.68
SIK3-210ENST00000480468 NUAK1O60285 661 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 DNAJB5O75953 348 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 SRP72O76094 671 aaKnown RBP10.78□□□□□ -0.68
SIK3-210ENST00000480468 FARP2O94887 1054 aaPredicted RBP10.78□□□□□ -0.68
SIK3-210ENST00000480468 GDF11O95390 407 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 GPD1P21695 349 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 IL10P22301 178 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 DNAJB1P25685 340 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 TPTEP56180 551 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 IFITM2Q01629 132 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 GHRHRQ02643 423 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 RALGDSQ12967 914 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 TRIM32Q13049 653 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 SPCS2Q15005 226 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 TBCELQ5QJ74 424 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 LRRC8EQ6NSJ5 796 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 IFNLR1Q8IU57 520 aaPredicted RBP10.78□□□□□ -0.68
SIK3-210ENST00000480468 WDR49Q8IV35 697 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 IL31RAQ8NI17 732 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 CERKQ8TCT0 537 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 CALML6Q8TD86 181 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 USP33Q8TEY7 942 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 CERS2Q96G23 380 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 FBXL20Q96IG2 436 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 QKIQ96PU8 341 aaKnown RBP eCLIP10.78□□□□□ -0.68
SIK3-210ENST00000480468 YME1L1Q96TA2 773 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 BCL7BQ9BQE9 202 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 BEGAINQ9BUH8 593 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 ACE2Q9BYF1 805 aaPredicted RBP10.78□□□□□ -0.68
SIK3-210ENST00000480468 HAPLN2Q9GZV7 340 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 HOXD1Q9GZZ0 328 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 CPNE5Q9HCH3 593 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 SCUBE2Q9NQ36 999 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 CARD8Q9Y2G2 431 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 ANKRD6Q9Y2G4 727 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 VWA7Q9Y334 891 aa10.78□□□□□ -0.68
SIK3-210ENST00000480468 XIRP1Q702N8 1843 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms