RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 TPSAB1Q15661 275 aa17.86■□□□□ 0.45
UPF3A-206ENST00000480362 MAP9Q49MG5 647 aa17.86■□□□□ 0.45
UPF3A-206ENST00000480362 TMEM215Q68D42 235 aa17.86■□□□□ 0.45
UPF3A-206ENST00000480362 SPATA22Q8NHS9 363 aa17.86■□□□□ 0.45
UPF3A-206ENST00000480362 WFIKKN2Q8TEU8 576 aa17.86■□□□□ 0.45
UPF3A-206ENST00000480362 AENQ8WTP8 325 aaKnown RBP17.86■□□□□ 0.45
UPF3A-206ENST00000480362 NXPE3Q969Y0 559 aa17.86■□□□□ 0.45
UPF3A-206ENST00000480362 TTC17Q96AE7 1141 aa17.86■□□□□ 0.45
UPF3A-206ENST00000480362 OXNAD1Q96HP4 312 aaPredicted RBP17.86■□□□□ 0.45
UPF3A-206ENST00000480362 RPL10LQ96L21 214 aaKnown RBP17.86■□□□□ 0.45
UPF3A-206ENST00000480362 MLPHQ9BV36 600 aaPredicted RBP17.86■□□□□ 0.45
UPF3A-206ENST00000480362 POLR1EQ9GZS1 481 aaKnown RBP17.86■□□□□ 0.45
UPF3A-206ENST00000480362 KCNK12Q9HB15 430 aa17.86■□□□□ 0.45
UPF3A-206ENST00000480362 HAUS2Q9NVX0 235 aa17.86■□□□□ 0.45
UPF3A-206ENST00000480362 UBP1Q9NZI7 540 aa17.86■□□□□ 0.45
UPF3A-206ENST00000480362 TTC24A2A3L6 582 aaPredicted RBP17.85■□□□□ 0.45
UPF3A-206ENST00000480362 PSMD3O43242 534 aa17.85■□□□□ 0.45
UPF3A-206ENST00000480362 ANXA9O76027 345 aa17.85■□□□□ 0.45
UPF3A-206ENST00000480362 OPRD1P41143 372 aa17.85■□□□□ 0.45
UPF3A-206ENST00000480362 SERPINH1P50454 418 aaKnown RBP17.85■□□□□ 0.45
UPF3A-206ENST00000480362 ECT2LQ008S8 904 aa17.85■□□□□ 0.45
UPF3A-206ENST00000480362 DSC2Q02487 901 aa17.85■□□□□ 0.45
UPF3A-206ENST00000480362 KDSRQ06136 332 aa17.85■□□□□ 0.45
UPF3A-206ENST00000480362 PUS10Q3MIT2 529 aaKnown RBP17.85■□□□□ 0.45
UPF3A-206ENST00000480362 FBXO38Q6PIJ6 1188 aa17.85■□□□□ 0.45
UPF3A-206ENST00000480362 SLC44A3Q8N4M1 653 aa17.85■□□□□ 0.45
UPF3A-206ENST00000480362 ZCCHC9Q8N567 271 aaKnown RBP17.85■□□□□ 0.45
UPF3A-206ENST00000480362 ATP11CQ8NB49 1132 aa17.85■□□□□ 0.45
UPF3A-206ENST00000480362 ARRDC2Q8TBH0 407 aa17.85■□□□□ 0.45
UPF3A-206ENST00000480362 CSGALNACT1Q8TDX6 532 aa17.85■□□□□ 0.45
UPF3A-206ENST00000480362 HNRNPLLQ8WVV9 542 aaKnown RBP17.85■□□□□ 0.45
UPF3A-206ENST00000480362 ANKRD7Q92527 254 aa17.85■□□□□ 0.45
UPF3A-206ENST00000480362 IMP4Q96G21 291 aaKnown RBP17.85■□□□□ 0.45
UPF3A-206ENST00000480362 PWWP2AQ96N64 755 aa17.85■□□□□ 0.45
UPF3A-206ENST00000480362 PPP1R2P1Q96PQ5 205 aa17.85■□□□□ 0.45
UPF3A-206ENST00000480362 SEMA3CQ99985 751 aa17.85■□□□□ 0.45
UPF3A-206ENST00000480362 MGME1Q9BQP7 344 aa17.85■□□□□ 0.45
UPF3A-206ENST00000480362 FOXP3Q9BZS1 431 aa17.85■□□□□ 0.45
UPF3A-206ENST00000480362 EIF2B3Q9NR50 452 aaKnown RBP17.85■□□□□ 0.45
UPF3A-206ENST00000480362 BRWD1Q9NSI6 2320 aa17.85■□□□□ 0.45
UPF3A-206ENST00000480362 LHX3Q9UBR4 397 aa17.85■□□□□ 0.45
UPF3A-206ENST00000480362 SLC25A13Q9UJS0 675 aa17.85■□□□□ 0.45
UPF3A-206ENST00000480362 FAM50BQ9Y247 325 aa17.85■□□□□ 0.45
UPF3A-206ENST00000480362 AAR2Q9Y312 384 aaKnown RBP17.85■□□□□ 0.45
UPF3A-206ENST00000480362 FCF1Q9Y324 198 aaKnown RBP17.85■□□□□ 0.45
UPF3A-206ENST00000480362 GOLGA6CA6NDK9 693 aa17.84■□□□□ 0.45
UPF3A-206ENST00000480362 GOLGA6BA6NDN3 693 aa17.84■□□□□ 0.45
UPF3A-206ENST00000480362 SMAD6O43541 496 aaKnown RBP17.84■□□□□ 0.45
UPF3A-206ENST00000480362 AP2A1O95782 977 aa17.84■□□□□ 0.45
UPF3A-206ENST00000480362 MT-CYBP00156 380 aaPredicted RBP17.84■□□□□ 0.45
UPF3A-206ENST00000480362 GOLGA6DP0CG33 693 aa17.84■□□□□ 0.45
UPF3A-206ENST00000480362 SRCP12931 536 aa17.84■□□□□ 0.45
UPF3A-206ENST00000480362 HSPA9P38646 679 aaKnown RBP17.84■□□□□ 0.45
UPF3A-206ENST00000480362 RGRP47804 291 aa17.84■□□□□ 0.45
UPF3A-206ENST00000480362 STK19P49842 368 aaPredicted RBP17.84■□□□□ 0.45
UPF3A-206ENST00000480362 GEMP55040 296 aa17.84■□□□□ 0.45
UPF3A-206ENST00000480362 CDK16Q00536 496 aa17.84■□□□□ 0.45
UPF3A-206ENST00000480362 TFF2Q03403 129 aa17.84■□□□□ 0.45
UPF3A-206ENST00000480362 MESP2Q0VG99 397 aa17.84■□□□□ 0.45
UPF3A-206ENST00000480362 SPARCL1Q14515 664 aa17.84■□□□□ 0.45
UPF3A-206ENST00000480362 KCTD11Q693B1 232 aa17.84■□□□□ 0.45
UPF3A-206ENST00000480362 NAIF1Q69YI7 327 aaPredicted RBP17.84■□□□□ 0.45
UPF3A-206ENST00000480362 EMBQ6PCB8 327 aa17.84■□□□□ 0.45
UPF3A-206ENST00000480362 PRPF39Q86UA1 669 aaKnown RBP17.84■□□□□ 0.45
UPF3A-206ENST00000480362 KLHDC8BQ8IXV7 354 aa17.84■□□□□ 0.45
UPF3A-206ENST00000480362 MCUQ8NE86 351 aa17.84■□□□□ 0.45
UPF3A-206ENST00000480362 MAFAQ8NHW3 353 aaPredicted RBP17.84■□□□□ 0.45
UPF3A-206ENST00000480362 CHFRQ96EP1 664 aa17.84■□□□□ 0.45
UPF3A-206ENST00000480362 RBM15Q96T37 977 aaKnown RBP eCLIP17.84■□□□□ 0.45
UPF3A-206ENST00000480362 CIPCQ9C0C6 399 aa17.84■□□□□ 0.45
UPF3A-206ENST00000480362 PRDM6Q9NQX0 595 aa17.84■□□□□ 0.45
UPF3A-206ENST00000480362 GOLGA6AQ9NYA3 693 aa17.84■□□□□ 0.45
UPF3A-206ENST00000480362 ERVW-1Q9UQF0 538 aa17.84■□□□□ 0.45
UPF3A-206ENST00000480362 HS3ST2Q9Y278 367 aa17.84■□□□□ 0.45
UPF3A-206ENST00000480362 MYO18AQ92614 2054 aaKnown RBP17.84■□□□□ 0.45
UPF3A-206ENST00000480362 ERI2A8K979 691 aaKnown RBP17.83■□□□□ 0.44
UPF3A-206ENST00000480362 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.83■□□□□ 0.44
UPF3A-206ENST00000480362 ASLP04424 464 aa17.83■□□□□ 0.44
UPF3A-206ENST00000480362 MMP2P08253 660 aa17.83■□□□□ 0.44
UPF3A-206ENST00000480362 IL9P15248 144 aa17.83■□□□□ 0.44
UPF3A-206ENST00000480362 EIF2DP41214 584 aaKnown RBP17.83■□□□□ 0.44
UPF3A-206ENST00000480362 CD86P42081 329 aa17.83■□□□□ 0.44
UPF3A-206ENST00000480362 SOX9P48436 509 aa17.83■□□□□ 0.44
UPF3A-206ENST00000480362 SCNN1BP51168 640 aa17.83■□□□□ 0.44
UPF3A-206ENST00000480362 RHOAP61586 193 aa17.83■□□□□ 0.44
UPF3A-206ENST00000480362 SARNPP82979 210 aaKnown RBP17.83■□□□□ 0.44
UPF3A-206ENST00000480362 NSUN2Q08J23 767 aaKnown RBP eCLIP17.83■□□□□ 0.44
UPF3A-206ENST00000480362 BEND6Q5SZJ8 279 aaPredicted RBP17.83■□□□□ 0.44
UPF3A-206ENST00000480362 ALG1LQ6GMV1 187 aa17.83■□□□□ 0.44
UPF3A-206ENST00000480362 PPP1R21Q6ZMI0 780 aa17.83■□□□□ 0.44
UPF3A-206ENST00000480362 METTL3Q86U44 580 aaKnown RBP17.83■□□□□ 0.44
UPF3A-206ENST00000480362 CCDC25Q86WR0 208 aa17.83■□□□□ 0.44
UPF3A-206ENST00000480362 RNF135Q8IUD6 432 aa17.83■□□□□ 0.44
UPF3A-206ENST00000480362 PHTF2Q8N3S3 785 aa17.83■□□□□ 0.44
UPF3A-206ENST00000480362 SH2D3CQ8N5H7 860 aa17.83■□□□□ 0.44
UPF3A-206ENST00000480362 CYB5D2Q8WUJ1 264 aa17.83■□□□□ 0.44
UPF3A-206ENST00000480362 SORCS1Q8WY21 1168 aa17.83■□□□□ 0.44
UPF3A-206ENST00000480362 CAVIN3Q969G5 261 aa17.83■□□□□ 0.44
UPF3A-206ENST00000480362 EXOC2Q96KP1 924 aa17.83■□□□□ 0.44
UPF3A-206ENST00000480362 GDAP1L1Q96MZ0 367 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms