RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 SLC39A1Q9NY26 324 aa12.16□□□□□ -0.46
USP11-208ENST00000480104 TRPM6Q9BX84 2022 aa12.16□□□□□ -0.46
USP11-208ENST00000480104 TNRC6AQ8NDV7 1962 aaKnown RBP12.16□□□□□ -0.46
USP11-208ENST00000480104 M0QYT0 321 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 RNF103O00237 685 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 KRT86O43790 486 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 ACSL4O60488 711 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 PHACTR2O75167 634 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 CBX6O95503 412 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 FURINP09958 794 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 GLB1P16278 677 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 MAP4P27816 1152 aaKnown RBP12.15□□□□□ -0.46
USP11-208ENST00000480104 PGDP52209 483 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 THOP1P52888 689 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 RPS21P63220 83 aaKnown RBP12.15□□□□□ -0.46
USP11-208ENST00000480104 PSMD6Q15008 389 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 ELOCQ15369 112 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 SNRNP35Q16560 246 aaKnown RBP12.15□□□□□ -0.46
USP11-208ENST00000480104 ACCSLQ4AC99 568 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 LVRNQ6Q4G3 990 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 TMEM135Q86UB9 458 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 UNC93AQ86WB7 457 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 LARP4BQ92615 738 aaKnown RBP12.15□□□□□ -0.46
USP11-208ENST00000480104 C19orf60Q96EN9 201 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 CCDC74BQ96LY2 380 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 NUDT22Q9BRQ3 303 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 DUSP16Q9BY84 665 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 ASPSCR1Q9BZE9 553 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 DYRK4Q9NR20 520 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 POLHQ9Y253 713 aa12.15□□□□□ -0.46
USP11-208ENST00000480104 IGHV5-10-1A0A0J9YXX1 117 aa12.14□□□□□ -0.47
USP11-208ENST00000480104 ATP9BO43861 1147 aa12.14□□□□□ -0.47
USP11-208ENST00000480104 REC8O95072 547 aa12.14□□□□□ -0.47
USP11-208ENST00000480104 CD2BP2O95400 341 aaKnown RBP12.14□□□□□ -0.47
USP11-208ENST00000480104 CPNE6O95741 557 aa12.14□□□□□ -0.47
USP11-208ENST00000480104 IGLV3-27P01718 113 aa12.14□□□□□ -0.47
USP11-208ENST00000480104 ALPIP09923 528 aa12.14□□□□□ -0.47
USP11-208ENST00000480104 PPARDQ03181 441 aa12.14□□□□□ -0.47
USP11-208ENST00000480104 CYP24A1Q07973 514 aa12.14□□□□□ -0.47
USP11-208ENST00000480104 ABHD18Q0P651 414 aa12.14□□□□□ -0.47
USP11-208ENST00000480104 CCDC15Q0P6D6 951 aa12.14□□□□□ -0.47
USP11-208ENST00000480104 DLG2Q15700 870 aa12.14□□□□□ -0.47
USP11-208ENST00000480104 AMZ1Q400G9 498 aa12.14□□□□□ -0.47
USP11-208ENST00000480104 ANKS6Q68DC2 871 aa12.14□□□□□ -0.47
USP11-208ENST00000480104 KIAA1161Q6NSJ0 714 aa12.14□□□□□ -0.47
USP11-208ENST00000480104 ERN2Q76MJ5 926 aaKnown RBP12.14□□□□□ -0.47
USP11-208ENST00000480104 KDELC2Q7Z4H8 507 aa12.14□□□□□ -0.47
USP11-208ENST00000480104 PIM3Q86V86 326 aa12.14□□□□□ -0.47
USP11-208ENST00000480104 GPR156Q8NFN8 814 aa12.14□□□□□ -0.47
USP11-208ENST00000480104 RNF139Q8WU17 664 aa12.14□□□□□ -0.47
USP11-208ENST00000480104 TRIM55Q9BYV6 548 aa12.14□□□□□ -0.47
USP11-208ENST00000480104 NUCKS1Q9H1E3 243 aaKnown RBP12.14□□□□□ -0.47
USP11-208ENST00000480104 RCOR3Q9P2K3 495 aaPredicted RBP12.14□□□□□ -0.47
USP11-208ENST00000480104 ANKUB1A6NFN9 424 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 SLC26A4O43511 780 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 FAM155BO75949 473 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 ZBED1O96006 694 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 PRR29P0C7W0 189 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 PDGFRAP16234 1089 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 GAP43P17677 238 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 F8A1P23610 371 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 PTGER4P35408 488 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 UBA7P41226 1012 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 SRSF11Q05519 484 aaKnown RBP12.13□□□□□ -0.47
USP11-208ENST00000480104 BIRC3Q13489 604 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 NCOA4Q13772 614 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 ERV3-1Q14264 604 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 ZRSR2Q15696 482 aaKnown RBP12.13□□□□□ -0.47
USP11-208ENST00000480104 DCAF12Q5T6F0 453 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 MACC1Q6ZN28 852 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 SFTPA2Q8IWL1 248 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 NRSN1Q8IZ57 195 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 AGBL5Q8NDL9 886 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 FBXO18Q8NFZ0 1043 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 RASSF8Q8NHQ8 419 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 ERCC4Q92889 916 aaPredicted RBP12.13□□□□□ -0.47
USP11-208ENST00000480104 LENG8Q96PV6 779 aaPredicted RBP12.13□□□□□ -0.47
USP11-208ENST00000480104 ULBP1Q9BZM6 244 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 SPRY4Q9C004 299 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 KIAA1586Q9HCI6 787 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 SLAMF7Q9NQ25 335 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 LATS2Q9NRM7 1088 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 OLFML3Q9NRN5 406 aa12.13□□□□□ -0.47
USP11-208ENST00000480104 FN1P02751 2386 aaKnown RBP12.13□□□□□ -0.47
USP11-208ENST00000480104 PNLIPP16233 465 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 TRIM21P19474 475 aaKnown RBP12.12□□□□□ -0.47
USP11-208ENST00000480104 VARSP26640 1264 aaKnown RBP12.12□□□□□ -0.47
USP11-208ENST00000480104 STAT5AP42229 794 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 ASPAP45381 313 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 TKTL1P51854 596 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 RNASE9P60153 205 aaKnown RBP12.12□□□□□ -0.47
USP11-208ENST00000480104 SULT2A1Q06520 285 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 SGCGQ13326 291 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 ALCAMQ13740 583 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 ARHGEF7Q14155 803 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 SMTNL2Q2TAL5 461 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 MS4A13Q5J8X5 152 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 RAB41Q5JT25 222 aa12.12□□□□□ -0.47
USP11-208ENST00000480104 JMJD6Q6NYC1 403 aaPredicted RBP12.12□□□□□ -0.47
USP11-208ENST00000480104 LINGO4Q6UY18 593 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms