RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 SORBS2O94875 1100 aaKnown RBP24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 NUDT2P50583 147 aa24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 RAB10P61026 200 aa24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 NSUN2Q08J23 767 aaKnown RBP eCLIP24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 LPCAT4Q643R3 524 aa24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 CWF19L1Q69YN2 538 aaKnown RBP24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 DSELQ8IZU8 1212 aa24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 PGAM4Q8N0Y7 254 aa24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 PQLC1Q8N2U9 271 aa24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 PPHLN1Q8NEY8 458 aaKnown RBP24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 TMEM30AQ9NV96 361 aa24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 ZMPSTE24O75844 475 aa24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 AHSGP02765 367 aa24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 THP07101 528 aa24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 ZCCHC18P0CG32 403 aa24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 ITGA7Q13683 1181 aa24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 TAF2Q6P1X5 1199 aa24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 TAC4Q86UU9 113 aa24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 CENPLQ8N0S6 344 aaPredicted RBP24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 FSTL5Q8N475 847 aaPredicted RBP24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 ICA1LQ8NDH6 482 aa24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 CATSPER1Q8NEC5 780 aa24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 IL12RB2Q99665 862 aa24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 WDR55Q9H6Y2 383 aaPredicted RBP24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 Q9Y3F1 56 aa24.97■■□□□ 1.59
SYNGAP1-206ENST00000479510 A0A087X1B8 175 aa24.96■■□□□ 1.59
SYNGAP1-206ENST00000479510 FGF10O15520 208 aaPredicted RBP24.96■■□□□ 1.59
SYNGAP1-206ENST00000479510 HOXC13P31276 330 aa24.96■■□□□ 1.59
SYNGAP1-206ENST00000479510 NAGLUP54802 743 aa24.96■■□□□ 1.59
SYNGAP1-206ENST00000479510 GEMP55040 296 aa24.96■■□□□ 1.59
SYNGAP1-206ENST00000479510 DNAJB13P59910 316 aa24.96■■□□□ 1.59
SYNGAP1-206ENST00000479510 PEX6Q13608 980 aa24.96■■□□□ 1.59
SYNGAP1-206ENST00000479510 KCTD4Q8WVF5 259 aa24.96■■□□□ 1.59
SYNGAP1-206ENST00000479510 HAPLN3Q96S86 360 aa24.96■■□□□ 1.59
SYNGAP1-206ENST00000479510 GLOD4Q9HC38 313 aa24.96■■□□□ 1.59
SYNGAP1-206ENST00000479510 ENTPD7Q9NQZ7 604 aa24.96■■□□□ 1.59
SYNGAP1-206ENST00000479510 ARHGEF38Q9NXL2 777 aa24.96■■□□□ 1.59
SYNGAP1-206ENST00000479510 TRPC5OSA6NMA1 111 aa24.95■■□□□ 1.59
SYNGAP1-206ENST00000479510 AIM2O14862 343 aa24.95■■□□□ 1.59
SYNGAP1-206ENST00000479510 PHGDHO43175 533 aaKnown RBP24.95■■□□□ 1.59
SYNGAP1-206ENST00000479510 IGLV3-25P01717 112 aa24.95■■□□□ 1.59
SYNGAP1-206ENST00000479510 STMN1P16949 149 aa24.95■■□□□ 1.59
SYNGAP1-206ENST00000479510 PAMP19021 973 aa24.95■■□□□ 1.59
SYNGAP1-206ENST00000479510 GABRB3P28472 473 aa24.95■■□□□ 1.59
SYNGAP1-206ENST00000479510 AQP4P55087 323 aa24.95■■□□□ 1.59
SYNGAP1-206ENST00000479510 SATB1Q01826 763 aa24.95■■□□□ 1.59
SYNGAP1-206ENST00000479510 PIGGQ5H8A4 983 aa24.95■■□□□ 1.59
SYNGAP1-206ENST00000479510 BRMS1LQ5PSV4 323 aa24.95■■□□□ 1.59
SYNGAP1-206ENST00000479510 OTOP3Q7RTS5 596 aa24.95■■□□□ 1.59
SYNGAP1-206ENST00000479510 LSMEM2Q8N112 164 aa24.95■■□□□ 1.59
SYNGAP1-206ENST00000479510 ATPAF2Q8N5M1 289 aa24.95■■□□□ 1.59
SYNGAP1-206ENST00000479510 PPP1R13LQ8WUF5 828 aa24.95■■□□□ 1.59
SYNGAP1-206ENST00000479510 EDEM1Q92611 657 aa24.95■■□□□ 1.59
SYNGAP1-206ENST00000479510 DLG3Q92796 817 aa24.95■■□□□ 1.59
SYNGAP1-206ENST00000479510 GPR78Q96P69 363 aa24.95■■□□□ 1.59
SYNGAP1-206ENST00000479510 ZBTB26Q9HCK0 441 aa24.95■■□□□ 1.59
SYNGAP1-206ENST00000479510 UBP1Q9NZI7 540 aa24.95■■□□□ 1.59
SYNGAP1-206ENST00000479510 ARCN1P48444 511 aaKnown RBP24.95■■□□□ 1.58
SYNGAP1-206ENST00000479510 MMEL1Q495T6 779 aa24.95■■□□□ 1.58
SYNGAP1-206ENST00000479510 THEMIS2Q5TEJ8 643 aa24.95■■□□□ 1.58
SYNGAP1-206ENST00000479510 OLFML2BQ68BL8 750 aa24.95■■□□□ 1.58
SYNGAP1-206ENST00000479510 PIWIL4Q7Z3Z4 852 aaKnown RBP24.95■■□□□ 1.58
SYNGAP1-206ENST00000479510 MRPL57Q9BQC6 102 aaKnown RBP24.95■■□□□ 1.58
SYNGAP1-206ENST00000479510 MRPL46Q9H2W6 279 aaKnown RBP24.95■■□□□ 1.58
SYNGAP1-206ENST00000479510 EFCAB1Q9HAE3 211 aa24.95■■□□□ 1.58
SYNGAP1-206ENST00000479510 ZDHHC2Q9UIJ5 367 aa24.95■■□□□ 1.58
SYNGAP1-206ENST00000479510 TCAF1Q9Y4C2 921 aa24.95■■□□□ 1.58
SYNGAP1-206ENST00000479510 SNX10Q9Y5X0 201 aa24.95■■□□□ 1.58
SYNGAP1-206ENST00000479510 DLX3O60479 287 aa24.94■■□□□ 1.58
SYNGAP1-206ENST00000479510 EPHA3P29320 983 aa24.94■■□□□ 1.58
SYNGAP1-206ENST00000479510 ALDH1A3P47895 512 aa24.94■■□□□ 1.58
SYNGAP1-206ENST00000479510 EIF4EBP2Q13542 120 aaPredicted RBP24.94■■□□□ 1.58
SYNGAP1-206ENST00000479510 ZNF423Q2M1K9 1284 aa24.94■■□□□ 1.58
SYNGAP1-206ENST00000479510 LIN52Q52LA3 116 aa24.94■■□□□ 1.58
SYNGAP1-206ENST00000479510 SLC41A1Q8IVJ1 513 aa24.94■■□□□ 1.58
SYNGAP1-206ENST00000479510 DQX1Q8TE96 717 aaKnown RBP24.94■■□□□ 1.58
SYNGAP1-206ENST00000479510 RNF34Q969K3 372 aa24.94■■□□□ 1.58
SYNGAP1-206ENST00000479510 CELF6Q96J87 481 aaKnown RBP24.94■■□□□ 1.58
SYNGAP1-206ENST00000479510 DDX50Q9BQ39 737 aaKnown RBP24.94■■□□□ 1.58
SYNGAP1-206ENST00000479510 PRKD2Q9BZL6 878 aa24.94■■□□□ 1.58
SYNGAP1-206ENST00000479510 Q9H521 79 aa24.94■■□□□ 1.58
SYNGAP1-206ENST00000479510 PIDD1Q9HB75 910 aa24.94■■□□□ 1.58
SYNGAP1-206ENST00000479510 CHST12Q9NRB3 414 aa24.94■■□□□ 1.58
SYNGAP1-206ENST00000479510 NEU3Q9UQ49 428 aa24.94■■□□□ 1.58
SYNGAP1-206ENST00000479510 DTNAQ9Y4J8 743 aa24.94■■□□□ 1.58
SYNGAP1-206ENST00000479510 FAM95CA0A1B0GW59 222 aa24.93■■□□□ 1.58
SYNGAP1-206ENST00000479510 MATN3O15232 486 aa24.93■■□□□ 1.58
SYNGAP1-206ENST00000479510 DENRO43583 198 aaKnown RBP24.93■■□□□ 1.58
SYNGAP1-206ENST00000479510 MYL3P08590 195 aa24.93■■□□□ 1.58
SYNGAP1-206ENST00000479510 F7P08709 466 aaPredicted RBP24.93■■□□□ 1.58
SYNGAP1-206ENST00000479510 ZNF865P0CJ78 1059 aaPredicted RBP24.93■■□□□ 1.58
SYNGAP1-206ENST00000479510 DENND5AQ6IQ26 1287 aa24.93■■□□□ 1.58
SYNGAP1-206ENST00000479510 KIAA0408Q6ZU52 694 aa24.93■■□□□ 1.58
SYNGAP1-206ENST00000479510 LRRC49Q8IUZ0 686 aa24.93■■□□□ 1.58
SYNGAP1-206ENST00000479510 AGR3Q8TD06 166 aa24.93■■□□□ 1.58
SYNGAP1-206ENST00000479510 NCSTNQ92542 709 aa24.93■■□□□ 1.58
SYNGAP1-206ENST00000479510 MAELQ96JY0 434 aaKnown RBP24.93■■□□□ 1.58
SYNGAP1-206ENST00000479510 FAR2Q96K12 515 aa24.93■■□□□ 1.58
SYNGAP1-206ENST00000479510 NUF2Q9BZD4 464 aa24.93■■□□□ 1.58
SYNGAP1-206ENST00000479510 CATSPERBQ9H7T0 1116 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms