RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 SELENONQ9NZV5 590 aa14.33□□□□□ -0.11
CCDC78-210ENST00000478979 MYBPHLA2RUH7 354 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 HTR3EA5X5Y0 456 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 I6L893 689 aaPredicted RBP14.33□□□□□ -0.12
CCDC78-210ENST00000478979 FBP2O00757 339 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 PTPN1P18031 435 aaKnown RBP14.33□□□□□ -0.12
CCDC78-210ENST00000478979 TYK2P29597 1187 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 PDE1CQ14123 709 aaPredicted RBP14.33□□□□□ -0.12
CCDC78-210ENST00000478979 OTUD1Q5VV17 481 aaPredicted RBP14.33□□□□□ -0.12
CCDC78-210ENST00000478979 ARHGAP17Q68EM7 881 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 PLEKHH3Q7Z736 793 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 LZTR1Q8N653 840 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 VPS50Q96JG6 964 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 ZNF560Q96MR9 790 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 GAD1Q99259 594 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 PTPN18Q99952 460 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 PKP2Q99959 881 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 SIK2Q9H0K1 926 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 DDIT4Q9NX09 232 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 STK39Q9UEW8 545 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 NUDT5Q9UKK9 219 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 TRDMT1O14717 391 aaKnown RBP14.33□□□□□ -0.12
CCDC78-210ENST00000478979 FOXD2O60548 495 aaPredicted RBP14.33□□□□□ -0.12
CCDC78-210ENST00000478979 STAU1O95793 577 aaKnown RBP14.33□□□□□ -0.12
CCDC78-210ENST00000478979 FGF3P11487 239 aaPredicted RBP14.33□□□□□ -0.12
CCDC78-210ENST00000478979 ATXN3P54252 364 aaPredicted RBP14.33□□□□□ -0.12
CCDC78-210ENST00000478979 FLOT2Q14254 428 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 TGFBIQ15582 683 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 SLC25A52Q3SY17 297 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 CLEC20AQ6ZU45 233 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 C10orf107Q8IVU9 208 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 RNF34Q969K3 372 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 TNIP3Q96KP6 325 aa14.33□□□□□ -0.12
CCDC78-210ENST00000478979 GSRP00390 522 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 NPR3P17342 541 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 ERCC2P18074 760 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 ALDH3B2P48448 385 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 HSPA13P48723 471 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 SEMA5AQ13591 1074 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 CERCAMQ5T4B2 595 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 LDLRAD1Q5T700 205 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 PAQR9Q6ZVX9 377 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 USP50Q70EL3 339 aaPredicted RBP14.32□□□□□ -0.12
CCDC78-210ENST00000478979 MCUQ8NE86 351 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 CENPIQ92674 756 aaPredicted RBP14.32□□□□□ -0.12
CCDC78-210ENST00000478979 MFSD3Q96ES6 412 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 COX4I2Q96KJ9 171 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 C11orf84Q9BUA3 381 aaPredicted RBP14.32□□□□□ -0.12
CCDC78-210ENST00000478979 MAN1C1Q9NR34 630 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 RNF11Q9Y3C5 154 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 ZBTB14O43829 449 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 CD4P01730 458 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 ALDH2P05091 517 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 CD1EP15812 388 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 RXRGP48443 463 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 NUP107P57740 925 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 UBXN11Q5T124 520 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 ALKAL1Q6UXT8 129 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 ZDHHC17Q8IUH5 632 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 CRYBG2Q8N1P7 616 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 SMG8Q8ND04 991 aaKnown RBP14.32□□□□□ -0.12
CCDC78-210ENST00000478979 FCRL3Q96P31 734 aaPredicted RBP14.32□□□□□ -0.12
CCDC78-210ENST00000478979 RANBP9Q96S59 729 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 DCUN1D5Q9BTE7 237 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 TMEM216Q9P0N5 145 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 SPATA7Q9P0W8 599 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 USP3Q9Y6I4 520 aa14.32□□□□□ -0.12
CCDC78-210ENST00000478979 DICER1Q9UPY3 1922 aaKnown RBP14.32□□□□□ -0.12
CCDC78-210ENST00000478979 AIM2O14862 343 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 XRCC1P18887 633 aaPredicted RBP14.31□□□□□ -0.12
CCDC78-210ENST00000478979 TPSB2P20231 275 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 NR2C2P49116 596 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 CLCNKBP51801 687 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 THOP1P52888 689 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 TPSAB1Q15661 275 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 SV2CQ496J9 727 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 NPWQ8N729 165 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 ARNTL2Q8WYA1 636 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 CDKL2Q92772 493 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 DUSP16Q9BY84 665 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 CAAP1Q9H8G2 361 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 DNAJC28Q9NX36 388 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 COQ6Q9Y2Z9 468 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 NRCAMQ92823 1304 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 FUOMA2VDF0 154 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 RRN3P2A6NIE6 340 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 PTGESO14684 152 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 XPOTO43592 962 aaKnown RBP14.31□□□□□ -0.12
CCDC78-210ENST00000478979 DGKIO75912 1065 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 MAGEA3P43357 314 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 ACADVLP49748 655 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 NUDT2P50583 147 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 NDST2P52849 883 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 SLC5A3P53794 718 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 TPI1P60174 286 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 IRF9Q00978 393 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 NRF1Q16656 503 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 RWDD4Q6NW29 188 aaKnown RBP14.31□□□□□ -0.12
CCDC78-210ENST00000478979 TMEM126BQ8IUX1 230 aa14.31□□□□□ -0.12
CCDC78-210ENST00000478979 CHERPQ8IWX8 916 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms