RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 C1QTNF3-AMACRE9PGA6 284 aa19.11■□□□□ 0.65
SREBF1-212ENST00000478616 CYP1A2P05177 515 aa19.11■□□□□ 0.65
SREBF1-212ENST00000478616 RACK1P63244 317 aaKnown RBP19.11■□□□□ 0.65
SREBF1-212ENST00000478616 TDRD12Q587J7 1177 aaKnown RBP19.11■□□□□ 0.65
SREBF1-212ENST00000478616 ERMARDQ5T6L9 678 aa19.11■□□□□ 0.65
SREBF1-212ENST00000478616 FAM46CQ5VWP2 391 aa19.11■□□□□ 0.65
SREBF1-212ENST00000478616 DSG4Q86SJ6 1040 aa19.11■□□□□ 0.65
SREBF1-212ENST00000478616 TRIM69Q86WT6 500 aa19.11■□□□□ 0.65
SREBF1-212ENST00000478616 BAHD1Q8TBE0 780 aaPredicted RBP19.11■□□□□ 0.65
SREBF1-212ENST00000478616 ISG20Q96AZ6 181 aaKnown RBP19.11■□□□□ 0.65
SREBF1-212ENST00000478616 NSMCE3Q96MG7 304 aa19.11■□□□□ 0.65
SREBF1-212ENST00000478616 TSPY26PQ9H489 355 aa19.11■□□□□ 0.65
SREBF1-212ENST00000478616 DHX35Q9H5Z1 703 aaKnown RBP19.11■□□□□ 0.65
SREBF1-212ENST00000478616 IL36AQ9UHA7 158 aa19.11■□□□□ 0.65
SREBF1-212ENST00000478616 CA5BQ9Y2D0 317 aa19.11■□□□□ 0.65
SREBF1-212ENST00000478616 LUC7L2Q9Y383 392 aaKnown RBP19.11■□□□□ 0.65
SREBF1-212ENST00000478616 PTPRBP23467 1997 aa19.11■□□□□ 0.65
SREBF1-212ENST00000478616 PLXNB3Q9ULL4 1909 aa19.11■□□□□ 0.65
SREBF1-212ENST00000478616 SHROOM3Q8TF72 1996 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 TBC1D3DA0A087WVF3 549 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 TBC1D3IA0A087WXS9 549 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 TBC1D3EA0A087X179 549 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 TBC1D3KA0A087X1G2 549 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 ANKRD62A6NC57 917 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 TBC1D3FA6NER0 549 aaPredicted RBP19.1■□□□□ 0.65
SREBF1-212ENST00000478616 TBC1D3LB9A6J9 549 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 H0Y8X5 98 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 KPNA3O00505 521 aaPredicted RBP19.1■□□□□ 0.65
SREBF1-212ENST00000478616 VILLO15195 856 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 TBC1D3HP0C7X1 549 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 ZNF883P0CG24 379 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 MYBL1P10243 752 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 MAT2AP31153 395 aaKnown RBP19.1■□□□□ 0.65
SREBF1-212ENST00000478616 ATXN3P54252 364 aaPredicted RBP19.1■□□□□ 0.65
SREBF1-212ENST00000478616 SERINC3Q13530 473 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 FGL2Q14314 439 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 CYTH1Q15438 398 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 ZNF423Q2M1K9 1284 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 PRAMEF14Q5SWL7 426 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 ATXN7L2Q5T6C5 722 aaPredicted RBP19.1■□□□□ 0.65
SREBF1-212ENST00000478616 TBC1D3GQ6DHY5 549 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 TBC1D3CQ6IPX1 549 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 PARS2Q7L3T8 475 aaKnown RBP19.1■□□□□ 0.65
SREBF1-212ENST00000478616 VSTM4Q8IW00 320 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 PLPP6Q8IY26 295 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 TBC1D3Q8IZP1 549 aaPredicted RBP19.1■□□□□ 0.65
SREBF1-212ENST00000478616 CELF6Q96J87 481 aaKnown RBP19.1■□□□□ 0.65
SREBF1-212ENST00000478616 DNAJC7Q99615 494 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 EPAS1Q99814 870 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 PACSIN1Q9BY11 444 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 HDAC8Q9BY41 377 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 SLC39A8Q9C0K1 460 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 KDM4CQ9H3R0 1056 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 CWC15Q9P013 229 aaKnown RBP19.1■□□□□ 0.65
SREBF1-212ENST00000478616 LHX3Q9UBR4 397 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 BTBD3Q9Y2F9 522 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 BZW2Q9Y6E2 419 aaKnown RBP19.1■□□□□ 0.65
SREBF1-212ENST00000478616 ASPMQ8IZT6 3477 aa19.1■□□□□ 0.65
SREBF1-212ENST00000478616 TDRD6O60522 2096 aaKnown RBP19.1■□□□□ 0.65
SREBF1-212ENST00000478616 J3KR12 359 aa19.09■□□□□ 0.65
SREBF1-212ENST00000478616 INSIG1O15503 277 aa19.09■□□□□ 0.65
SREBF1-212ENST00000478616 TMCC1O94876 653 aa19.09■□□□□ 0.65
SREBF1-212ENST00000478616 PRNPP04156 253 aa19.09■□□□□ 0.65
SREBF1-212ENST00000478616 EIF4A3P38919 411 aaKnown RBP19.09■□□□□ 0.65
SREBF1-212ENST00000478616 ABL2P42684 1182 aa19.09■□□□□ 0.65
SREBF1-212ENST00000478616 YBEYP58557 167 aaPredicted RBP19.09■□□□□ 0.65
SREBF1-212ENST00000478616 SLC25A11Q02978 314 aaKnown RBP19.09■□□□□ 0.65
SREBF1-212ENST00000478616 SFSWAPQ12872 951 aaKnown RBP19.09■□□□□ 0.65
SREBF1-212ENST00000478616 SLC14A1Q13336 389 aa19.09■□□□□ 0.65
SREBF1-212ENST00000478616 DPYSQ14117 519 aa19.09■□□□□ 0.65
SREBF1-212ENST00000478616 ARHGAP36Q6ZRI8 547 aa19.09■□□□□ 0.65
SREBF1-212ENST00000478616 ERN2Q76MJ5 926 aaKnown RBP19.09■□□□□ 0.65
SREBF1-212ENST00000478616 SPATS2Q86XZ4 545 aaKnown RBP19.09■□□□□ 0.65
SREBF1-212ENST00000478616 IQCDQ96DY2 449 aa19.09■□□□□ 0.65
SREBF1-212ENST00000478616 HEPHQ9BQS7 1158 aa19.09■□□□□ 0.65
SREBF1-212ENST00000478616 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.09■□□□□ 0.65
SREBF1-212ENST00000478616 ETNK2Q9NVF9 386 aa19.09■□□□□ 0.65
SREBF1-212ENST00000478616 HECAQ9UBI9 543 aaPredicted RBP19.09■□□□□ 0.65
SREBF1-212ENST00000478616 GGT7Q9UJ14 662 aa19.09■□□□□ 0.65
SREBF1-212ENST00000478616 SCINQ9Y6U3 715 aa19.09■□□□□ 0.65
SREBF1-212ENST00000478616 RNGTTO60942 597 aaKnown RBP19.08■□□□□ 0.64
SREBF1-212ENST00000478616 GSRP00390 522 aa19.08■□□□□ 0.64
SREBF1-212ENST00000478616 ERCC2P18074 760 aa19.08■□□□□ 0.64
SREBF1-212ENST00000478616 PCK1P35558 622 aa19.08■□□□□ 0.64
SREBF1-212ENST00000478616 ETFBP38117 255 aa19.08■□□□□ 0.64
SREBF1-212ENST00000478616 TPI1P60174 286 aa19.08■□□□□ 0.64
SREBF1-212ENST00000478616 ZNF284Q2VY69 593 aa19.08■□□□□ 0.64
SREBF1-212ENST00000478616 TMEM259Q4ZIN3 620 aa19.08■□□□□ 0.64
SREBF1-212ENST00000478616 SEL1L3Q68CR1 1132 aa19.08■□□□□ 0.64
SREBF1-212ENST00000478616 ALKBH5Q6P6C2 394 aaKnown RBP19.08■□□□□ 0.64
SREBF1-212ENST00000478616 RFX8Q6ZV50 586 aa19.08■□□□□ 0.64
SREBF1-212ENST00000478616 NIPA2Q8N8Q9 360 aa19.08■□□□□ 0.64
SREBF1-212ENST00000478616 TMEM145Q8NBT3 493 aa19.08■□□□□ 0.64
SREBF1-212ENST00000478616 OR2AP1Q8NGE2 309 aa19.08■□□□□ 0.64
SREBF1-212ENST00000478616 KLK6Q92876 244 aa19.08■□□□□ 0.64
SREBF1-212ENST00000478616 CHP1Q99653 195 aa19.08■□□□□ 0.64
SREBF1-212ENST00000478616 TM7SF3Q9NS93 570 aa19.08■□□□□ 0.64
SREBF1-212ENST00000478616 EPG5Q9HCE0 2579 aa19.07■□□□□ 0.64
SREBF1-212ENST00000478616 COL5A1P20908 1838 aaPredicted RBP19.07■□□□□ 0.64
SREBF1-212ENST00000478616 A0A1W2PQU0 124 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms