RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 PMEPA1Q969W9 287 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 MOCOSQ96EN8 888 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 SLC39A13Q96H72 371 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 FEM1CQ96JP0 617 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 CALR3Q96L12 384 aaKnown RBP7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 IPO9Q96P70 1041 aaKnown RBP7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 TAAR9Q96RI9 348 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 C1QTNF2Q9BXJ5 285 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 PANK2Q9BZ23 570 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 SLC13A1Q9BZW2 595 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 SEMA6CQ9H3T2 930 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 LRRC4Q9HBW1 653 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 DMAC2Q9NW81 257 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 SIRPGQ9P1W8 387 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 TFIP11Q9UBB9 837 aaKnown RBP7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 BOLA1Q9Y3E2 137 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 DNHD1Q96M86 4753 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 CSMD2Q7Z408 3487 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 PDZD2O15018 2839 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 HIVEP1P15822 2718 aa7.49□□□□□ -1.21
SPTLC1-205ENST00000477888 MTORP42345 2549 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 FBN3Q75N90 2809 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 TTLL8A6PVC2 850 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 EFCAB7A8K855 629 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 XPO1O14980 1071 aaKnown RBP7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 MT-CO1P00395 513 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 FYNP06241 537 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 PRKAR1AP10644 381 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 PNLIPP16233 465 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 OAS2P29728 719 aaKnown RBP7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 RAD23BP54727 409 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 SLC8A3P57103 927 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 DAOAP59103 153 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 CDC20Q12834 499 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 PTK2BQ14289 1009 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 EIF2S3LQ2VIR3 472 aaKnown RBP7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 DEFB109BQ30KR1 87 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 CRTC2Q53ET0 693 aaPredicted RBP7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 EFHC2Q5JST6 749 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 FAXCQ5TGI0 409 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 CXorf57Q6NSI4 855 aaKnown RBP7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 KIAA1161Q6NSJ0 714 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 CCDC73Q6ZRK6 1079 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 ASB18Q6ZVZ8 466 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 ZC3H18Q86VM9 953 aaKnown RBP7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 CACNA2D3Q8IZS8 1091 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 LGI2Q8N0V4 545 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 SLC34A3Q8N130 599 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 FSTL5Q8N475 847 aaPredicted RBP7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 SH2D3CQ8N5H7 860 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 Q8N9G6 341 aaPredicted RBP7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 GPR156Q8NFN8 814 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 PCDH19Q8TAB3 1148 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 TMEM174Q8WUU8 243 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 SCG3Q8WXD2 468 aaKnown RBP7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 ASB12Q8WXK4 309 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 CENPTQ96BT3 561 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 TCTN2Q96GX1 697 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 CLIC6Q96NY7 704 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 FEM1AQ9BSK4 669 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 BACH2Q9BYV9 841 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 SPRY4Q9C004 299 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 PRM3Q9NNZ6 103 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 CASS4Q9NQ75 786 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 CNGB3Q9NQW8 809 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 CGNQ9P2M7 1197 aaKnown RBP7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 DKK3Q9UBP4 350 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 ERRFI1Q9UJM3 462 aaPredicted RBP7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 FBXO2Q9UK22 296 aaPredicted RBP7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 MAP4K5Q9Y4K4 846 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 OR51B4Q9Y5P0 310 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 FADS3Q9Y5Q0 445 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 KCNMB2Q9Y691 235 aa7.48□□□□□ -1.21
SPTLC1-205ENST00000477888 APCP25054 2843 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 DOCK9Q9BZ29 2069 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 IGLON5A6NGN9 336 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 TCP11X1B4DZS4 312 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 HGSO14964 777 aaPredicted RBP7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 BNIP3LO60238 219 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 RAD1O60671 282 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 PRNPP04156 253 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 GLB1P16278 677 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 TACR2P21452 398 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 STAT6P42226 847 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 PPARDQ03181 441 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 SGCGQ13326 291 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 NNTQ13423 1086 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 SEPT6Q14141 434 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 ELOCQ15369 112 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 KNOP1Q1ED39 458 aaKnown RBP7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 ARSIQ5FYB1 569 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 FAM26FQ5R3K3 315 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 CERCAMQ5T4B2 595 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 PHF19Q5T6S3 580 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 RAP1GAP2Q684P5 730 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 OGFOD3Q6PK18 319 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 SPRED1Q7Z699 444 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 CCDC13Q8IYE1 715 aa7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 CCAR2Q8N163 923 aaKnown RBP7.47□□□□□ -1.21
SPTLC1-205ENST00000477888 SIX6OS1Q8N1H7 587 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms