RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 FOXQ1Q9C009 403 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 HAUS2Q9NVX0 235 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 CACNA2D2Q9NY47 1150 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 LHX3Q9UBR4 397 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 AMACRQ9UHK6 382 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 FEZ2Q9UHY8 353 aaPredicted RBP16.45■□□□□ 0.22
VHL-203ENST00000477538 TRHDEQ9UKU6 1024 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 ATP8A1Q9Y2Q0 1164 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 MTF2Q9Y483 593 aaPredicted RBP16.45■□□□□ 0.22
VHL-203ENST00000477538 TTLL3Q9Y4R7 772 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 MYLKQ15746 1914 aa16.45■□□□□ 0.22
VHL-203ENST00000477538 C5orf60A6NFR6 353 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 FAM170BA6NMN3 283 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 STK25O00506 426 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 MUSKO15146 869 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 ECEL1O95672 775 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 GAS8O95995 478 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 HLA-EP13747 358 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 ACTN2P35609 894 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 HSPA9P38646 679 aaKnown RBP16.44■□□□□ 0.22
VHL-203ENST00000477538 ITKQ08881 620 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 ENPP2Q13822 863 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 P3H1Q32P28 736 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 ANKRD20A2Q5SQ80 823 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 ANKRD20A1Q5TYW2 823 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 ANKRD20A3Q5VUR7 823 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 Q6ZVU0 165 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 PID1Q7Z2X4 250 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 TRMT11Q7Z4G4 463 aaKnown RBP16.44■□□□□ 0.22
VHL-203ENST00000477538 PGBD5Q8N414 524 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 CNTD1Q8N815 330 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 ZNF366Q8N895 744 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 CCDC110Q8TBZ0 833 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 FRS2Q8WU20 508 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 SLCO2A1Q92959 643 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 EXOC2Q96KP1 924 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 TEKT5Q96M29 485 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 SPATA13Q96N96 652 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 MGME1Q9BQP7 344 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 TM6SF2Q9BZW4 377 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 TNKS2Q9H2K2 1166 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 TMEM245Q9H330 911 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 RRAGDQ9NQL2 400 aaPredicted RBP16.44■□□□□ 0.22
VHL-203ENST00000477538 STON1Q9Y6Q2 735 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 TTC28Q96AY4 2481 aa16.44■□□□□ 0.22
VHL-203ENST00000477538 EDDM13A0A1B0GTR0 161 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 WASH3PC4AMC7 463 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 ZBTB24O43167 697 aaPredicted RBP16.43■□□□□ 0.22
VHL-203ENST00000477538 OPHN1O60890 802 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 ZNF821O75541 412 aaPredicted RBP16.43■□□□□ 0.22
VHL-203ENST00000477538 GCATO75600 419 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 KLF8O95600 359 aaPredicted RBP16.43■□□□□ 0.22
VHL-203ENST00000477538 IGSF6O95976 241 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 GSRP00390 522 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 ETS1P14921 441 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 PRKCHP24723 683 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 NTSR1P30989 418 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 WASP42768 502 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 RGRP47804 291 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 MAXP61244 160 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 DR1Q01658 176 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 DHX34Q14147 1143 aaKnown RBP16.43■□□□□ 0.22
VHL-203ENST00000477538 HNRNPA1L2Q32P51 320 aaKnown RBP16.43■□□□□ 0.22
VHL-203ENST00000477538 ATXN7L2Q5T6C5 722 aaPredicted RBP16.43■□□□□ 0.22
VHL-203ENST00000477538 ITPRIPL1Q6GPH6 555 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 SDE2Q6IQ49 451 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 ARHGEF18Q6ZSZ5 1173 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 PRUNE1Q86TP1 453 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 SYNPOQ8N3V7 929 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 IL17RCQ8NAC3 791 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 GLIS1Q8NBF1 620 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 PJA1Q8NG27 643 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 OR2AP1Q8NGE2 309 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 RPLP0P6Q8NHW5 317 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 GDAP1L1Q96MZ0 367 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 POLR1EQ9GZS1 481 aaKnown RBP16.43■□□□□ 0.22
VHL-203ENST00000477538 MTG2Q9H4K7 406 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 LMAN1LQ9HAT1 526 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 PCDH9Q9HC56 1237 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 RSPH14Q9UHP6 348 aa16.43■□□□□ 0.22
VHL-203ENST00000477538 BNIP3LO60238 219 aa16.42■□□□□ 0.22
VHL-203ENST00000477538 KRT14P02533 472 aa16.42■□□□□ 0.22
VHL-203ENST00000477538 EPHX1P07099 455 aa16.42■□□□□ 0.22
VHL-203ENST00000477538 ZSCAN5DPP0CG00 497 aa16.42■□□□□ 0.22
VHL-203ENST00000477538 ALADP13716 330 aa16.42■□□□□ 0.22
VHL-203ENST00000477538 NFKB1P19838 968 aa16.42■□□□□ 0.22
VHL-203ENST00000477538 CD68P34810 354 aaPredicted RBP16.42■□□□□ 0.22
VHL-203ENST00000477538 PTGIRP43119 386 aa16.42■□□□□ 0.22
VHL-203ENST00000477538 RECQLP46063 649 aaPredicted RBP16.42■□□□□ 0.22
VHL-203ENST00000477538 SNRPD1P62314 119 aaKnown RBP16.42■□□□□ 0.22
VHL-203ENST00000477538 NSUN2Q08J23 767 aaKnown RBP eCLIP16.42■□□□□ 0.22
VHL-203ENST00000477538 PPP1R7Q15435 360 aa16.42■□□□□ 0.22
VHL-203ENST00000477538 TRIP13Q15645 432 aaPredicted RBP16.42■□□□□ 0.22
VHL-203ENST00000477538 KCTD19Q17RG1 926 aaPredicted RBP16.42■□□□□ 0.22
VHL-203ENST00000477538 HSF5Q4G112 596 aaPredicted RBP16.42■□□□□ 0.22
VHL-203ENST00000477538 CARD16Q5EG05 197 aa16.42■□□□□ 0.22
VHL-203ENST00000477538 ALG1LQ6GMV1 187 aa16.42■□□□□ 0.22
VHL-203ENST00000477538 TRIM67Q6ZTA4 783 aa16.42■□□□□ 0.22
VHL-203ENST00000477538 MMGT1Q8N4V1 131 aa16.42■□□□□ 0.22
VHL-203ENST00000477538 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms