RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 THEGQ9P2T0 379 aa7.15□□□□□ -1.26
LRCH3-215ENST00000476664 RRP15Q9Y3B9 282 aaKnown RBP7.15□□□□□ -1.26
LRCH3-215ENST00000476664 PCDHA10Q9Y5I2 948 aa7.15□□□□□ -1.26
LRCH3-215ENST00000476664 RBM8AQ9Y5S9 174 aaKnown RBP7.15□□□□□ -1.26
LRCH3-215ENST00000476664 POMT1Q9Y6A1 747 aa7.15□□□□□ -1.26
LRCH3-215ENST00000476664 TRANK1O15050 2925 aa7.15□□□□□ -1.27
LRCH3-215ENST00000476664 LOC105369274A0A096LPK9 316 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 TRAV34A0A0B4J273 112 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 LOC102723532A0A0G2JNH3 316 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 TEX13CA0A0J9YWL9 993 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 A0A1W2PQM1 296 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 CDHR4A6H8M9 788 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 C2orf78A6NCI8 922 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 KCNJ18B7U540 433 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 ASAP2O43150 1006 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 CYP7B1O75881 506 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 SASH1O94885 1247 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 LMNAP02545 664 aaKnown RBP7.14□□□□□ -1.27
LRCH3-215ENST00000476664 RB1P06400 928 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 VSIG10L2P0DP72 767 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 PCP11498 1178 aaKnown RBP7.14□□□□□ -1.27
LRCH3-215ENST00000476664 ACP5P13686 325 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 SELLP14151 372 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 FGFR4P22455 802 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 TTKP33981 857 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 ETV4P43268 484 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 SLC15A1P46059 708 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 MTHFSP49914 203 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 STAT2P52630 851 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 ZNF132P52740 706 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 CLRN1P58418 232 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 PIGFQ07326 219 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 ACTN3Q08043 901 aaPredicted RBP7.14□□□□□ -1.27
LRCH3-215ENST00000476664 SLFN5Q08AF3 891 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 KCNJ12Q14500 433 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 ZIK1Q3SY52 487 aaPredicted RBP7.14□□□□□ -1.27
LRCH3-215ENST00000476664 CRY2Q49AN0 593 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 SLC9B1Q4ZJI4 515 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 RUNDC3AQ59EK9 446 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 CERCAMQ5T4B2 595 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 MAMDC4Q6UXC1 1216 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 MON1AQ86VX9 555 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 WFDC3Q8IUB2 231 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 LURAP1LQ8IV03 231 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 ARHGAP12Q8IWW6 846 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 SAMD14Q8IZD0 417 aaPredicted RBP7.14□□□□□ -1.27
LRCH3-215ENST00000476664 OR4N4Q8N0Y3 316 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 SHKBP1Q8TBC3 707 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 DENND1AQ8TEH3 1009 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 ARRDC3Q96B67 414 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 FAR2Q96K12 515 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 PHACTR3Q96KR7 559 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 FER1L6-AS2Q96M78 137 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 AK8Q96MA6 479 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 RUNDC3BQ96NL0 473 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 FIZ1Q96SL8 496 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 MAP7D2Q96T17 732 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 THAP9Q9H5L6 903 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 MID1IP1Q9NPA3 183 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 SNTG1Q9NSN8 517 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 FBXO28Q9NVF7 368 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 DNAJB9Q9UBS3 223 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 HOOK1Q9UJC3 728 aaKnown RBP7.14□□□□□ -1.27
LRCH3-215ENST00000476664 SYNRGQ9UMZ2 1314 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 MTMR6Q9Y217 621 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 RCE1Q9Y256 329 aa7.14□□□□□ -1.27
LRCH3-215ENST00000476664 UBE2J1Q9Y385 318 aaPredicted RBP7.14□□□□□ -1.27
LRCH3-215ENST00000476664 TBC1D3DA0A087WVF3 549 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 TBC1D3IA0A087WXS9 549 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 TBC1D3EA0A087X179 549 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 TBC1D3KA0A087X1G2 549 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 TBC1D3BA6NDS4 549 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 TBC1D3FA6NER0 549 aaPredicted RBP7.13□□□□□ -1.27
LRCH3-215ENST00000476664 CDRT15L2A8MXV6 281 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 A8MZ25 164 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 TBC1D3LB9A6J9 549 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 SMIM22K7EJ46 135 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 TXNL1O43396 289 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 STAM2O75886 525 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 FTCDO95954 541 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 TBC1D3HP0C7X1 549 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 HGFP14210 728 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 PTPN2P17706 415 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 CPOXP36551 454 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 GATMP50440 423 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 RCAN1P53805 252 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 POLR2FP61218 127 aaKnown RBP7.13□□□□□ -1.27
LRCH3-215ENST00000476664 RAP2BP61225 183 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 KIAA2012Q0VF49 1180 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 SLC39A6Q13433 755 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 BAATQ14032 418 aaPredicted RBP7.13□□□□□ -1.27
LRCH3-215ENST00000476664 CCNIQ14094 377 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 CLCA4Q14CN2 919 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 UBXN2BQ14CS0 331 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 C15orf59Q2T9L4 293 aaPredicted RBP7.13□□□□□ -1.27
LRCH3-215ENST00000476664 DPCR1Q3MIW9 517 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 PLEKHN1Q494U1 663 aaPredicted RBP7.13□□□□□ -1.27
LRCH3-215ENST00000476664 GAGE13Q4V321 117 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 TMEM196Q5HYL7 178 aa7.13□□□□□ -1.27
LRCH3-215ENST00000476664 ANKRD40Q6AI12 368 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms