RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 IFNAR2P48551 515 aa18.39■□□□□ 0.53
ATG4B-217ENST00000475693 CRADDP78560 199 aa18.39■□□□□ 0.53
ATG4B-217ENST00000475693 MORF4L2Q15014 288 aa18.39■□□□□ 0.53
ATG4B-217ENST00000475693 UAP1Q16222 522 aaPredicted RBP18.39■□□□□ 0.53
ATG4B-217ENST00000475693 PARP6Q2NL67 630 aa18.39■□□□□ 0.53
ATG4B-217ENST00000475693 TMEM215Q68D42 235 aa18.39■□□□□ 0.53
ATG4B-217ENST00000475693 DENND2CQ68D51 928 aa18.39■□□□□ 0.53
ATG4B-217ENST00000475693 ZNF534Q76KX8 674 aa18.39■□□□□ 0.53
ATG4B-217ENST00000475693 EIF1ADQ8N9N8 165 aaKnown RBP18.39■□□□□ 0.53
ATG4B-217ENST00000475693 LMLNQ96KR4 655 aa18.39■□□□□ 0.53
ATG4B-217ENST00000475693 C9orf72Q96LT7 481 aa18.39■□□□□ 0.53
ATG4B-217ENST00000475693 FERMT1Q9BQL6 677 aa18.39■□□□□ 0.53
ATG4B-217ENST00000475693 FAM83CQ9BQN1 747 aa18.39■□□□□ 0.53
ATG4B-217ENST00000475693 WDR83Q9BRX9 315 aaKnown RBP18.39■□□□□ 0.53
ATG4B-217ENST00000475693 GBA3Q9H227 469 aa18.39■□□□□ 0.53
ATG4B-217ENST00000475693 GLOD4Q9HC38 313 aa18.39■□□□□ 0.53
ATG4B-217ENST00000475693 CD207Q9UJ71 328 aa18.39■□□□□ 0.53
ATG4B-217ENST00000475693 ZMYM5Q9UJ78 669 aa18.39■□□□□ 0.53
ATG4B-217ENST00000475693 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.38■□□□□ 0.53
ATG4B-217ENST00000475693 TCF3P15923 654 aa18.38■□□□□ 0.53
ATG4B-217ENST00000475693 HNRNPDQ14103 355 aaKnown RBP18.38■□□□□ 0.53
ATG4B-217ENST00000475693 CYTH1Q15438 398 aa18.38■□□□□ 0.53
ATG4B-217ENST00000475693 FUT11Q495W5 492 aa18.38■□□□□ 0.53
ATG4B-217ENST00000475693 MPP7Q5T2T1 576 aa18.38■□□□□ 0.53
ATG4B-217ENST00000475693 PACS2Q86VP3 889 aa18.38■□□□□ 0.53
ATG4B-217ENST00000475693 CAND1Q86VP6 1230 aaKnown RBP18.38■□□□□ 0.53
ATG4B-217ENST00000475693 IGDCC3Q8IVU1 814 aa18.38■□□□□ 0.53
ATG4B-217ENST00000475693 KIF9Q9HAQ2 790 aa18.38■□□□□ 0.53
ATG4B-217ENST00000475693 PMPCBO75439 489 aa18.38■□□□□ 0.53
ATG4B-217ENST00000475693 RENBPP51606 427 aa18.38■□□□□ 0.53
ATG4B-217ENST00000475693 SEMA5AQ13591 1074 aa18.38■□□□□ 0.53
ATG4B-217ENST00000475693 PCSK7Q16549 785 aa18.38■□□□□ 0.53
ATG4B-217ENST00000475693 GEN1Q17RS7 908 aa18.38■□□□□ 0.53
ATG4B-217ENST00000475693 PLEKHG6Q3KR16 790 aa18.38■□□□□ 0.53
ATG4B-217ENST00000475693 ICE2Q659A1 982 aa18.38■□□□□ 0.53
ATG4B-217ENST00000475693 MPP5Q8N3R9 675 aa18.38■□□□□ 0.53
ATG4B-217ENST00000475693 ZCCHC9Q8N567 271 aaKnown RBP18.38■□□□□ 0.53
ATG4B-217ENST00000475693 DEFB123Q8N688 67 aa18.38■□□□□ 0.53
ATG4B-217ENST00000475693 TRPV4Q9HBA0 871 aa18.38■□□□□ 0.53
ATG4B-217ENST00000475693 SAYSD1Q9NPB0 183 aa18.38■□□□□ 0.53
ATG4B-217ENST00000475693 IGSF9Q9P2J2 1179 aa18.38■□□□□ 0.53
ATG4B-217ENST00000475693 UBA2Q9UBT2 640 aaPredicted RBP18.38■□□□□ 0.53
ATG4B-217ENST00000475693 MTRF1LQ9UGC7 380 aaKnown RBP18.38■□□□□ 0.53
ATG4B-217ENST00000475693 NUMBLQ9Y6R0 609 aa18.38■□□□□ 0.53
ATG4B-217ENST00000475693 SRRM3A6NNA2 597 aaPredicted RBP18.37■□□□□ 0.53
ATG4B-217ENST00000475693 MTSS1O43312 755 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 ADH5P11766 374 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 ZNF33AQ06730 810 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 PDIA2Q13087 525 aaKnown RBP18.37■□□□□ 0.53
ATG4B-217ENST00000475693 KYNUQ16719 465 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 BBS9Q3SYG4 887 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 PRPF39Q86UA1 669 aaKnown RBP18.37■□□□□ 0.53
ATG4B-217ENST00000475693 LRRC49Q8IUZ0 686 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 OR2W6PQ8NHA6 318 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 SERPINB12Q96P63 405 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 TXLNGYQ9BZA5 131 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 KIAA1522Q9P206 1035 aaPredicted RBP18.37■□□□□ 0.53
ATG4B-217ENST00000475693 TRHDEQ9UKU6 1024 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 CHADO15335 359 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 PIAS1O75925 651 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 AGTP01019 485 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 TPH1P17752 444 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 GDI1P31150 447 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 CD86P42081 329 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 MTHFRP42898 656 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 GAB4Q2WGN9 574 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 PITRM1Q5JRX3 1037 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 RNF43Q68DV7 783 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 MFSD6LQ8IWD5 586 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 SUGP1Q8IWZ8 645 aaKnown RBP18.37■□□□□ 0.53
ATG4B-217ENST00000475693 IQCKQ8N0W5 287 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 TEX26Q8N6G2 289 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 BBOF1Q8ND07 529 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 IPMKQ8NFU5 416 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 OR52K1Q8NGK4 314 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 OR6K2Q8NGY2 324 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 BCAS4Q8TDM0 211 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 UBLCP1Q8WVY7 318 aaPredicted RBP18.37■□□□□ 0.53
ATG4B-217ENST00000475693 SUSD6Q92537 303 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 EPB41L4BQ9H329 900 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 ECT2Q9H8V3 914 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 ZDHHC4Q9NPG8 344 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 SHOC2Q9UQ13 582 aa18.37■□□□□ 0.53
ATG4B-217ENST00000475693 SLC9A3R1O14745 358 aaPredicted RBP18.36■□□□□ 0.53
ATG4B-217ENST00000475693 MMP2P08253 660 aa18.36■□□□□ 0.53
ATG4B-217ENST00000475693 HSD17B3P37058 310 aa18.36■□□□□ 0.53
ATG4B-217ENST00000475693 SOX9P48436 509 aa18.36■□□□□ 0.53
ATG4B-217ENST00000475693 ATXN7L2Q5T6C5 722 aaPredicted RBP18.36■□□□□ 0.53
ATG4B-217ENST00000475693 TMCO4Q5TGY1 634 aa18.36■□□□□ 0.53
ATG4B-217ENST00000475693 PCGF5Q86SE9 256 aa18.36■□□□□ 0.53
ATG4B-217ENST00000475693 CCDC117Q8IWD4 279 aaPredicted RBP18.36■□□□□ 0.53
ATG4B-217ENST00000475693 ZBED8Q8IZ13 594 aa18.36■□□□□ 0.53
ATG4B-217ENST00000475693 CYB5D2Q8WUJ1 264 aa18.36■□□□□ 0.53
ATG4B-217ENST00000475693 ERLEC1Q96DZ1 483 aa18.36■□□□□ 0.53
ATG4B-217ENST00000475693 SEMA3CQ99985 751 aa18.36■□□□□ 0.53
ATG4B-217ENST00000475693 TM6SF2Q9BZW4 377 aa18.36■□□□□ 0.53
ATG4B-217ENST00000475693 UBE2ZQ9H832 354 aaPredicted RBP18.36■□□□□ 0.53
ATG4B-217ENST00000475693 SLCO3A1Q9UIG8 710 aa18.36■□□□□ 0.53
ATG4B-217ENST00000475693 GGA2Q9UJY4 613 aa18.36■□□□□ 0.53
ATG4B-217ENST00000475693 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms