RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 APC2O95996 2303 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 ATRXP46100 2492 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 LY6G6EA0A0G2JKS1 128 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 POM121BA6NF01 834 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 LRRC10BA6NIK2 292 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 PES1O00541 588 aaKnown RBP7.16□□□□□ -1.26
HDAC3-207ENST00000475549 YKT6O15498 198 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 SPINT1O43278 529 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 RFPL3O75679 317 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 PAK4O96013 591 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-207ENST00000475549 PLEKP08567 350 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-207ENST00000475549 C1SP09871 688 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 THEGLP0DJG4 465 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 ADRB3P13945 408 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 JUPP14923 745 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 CKMT2P17540 419 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 DGKAP23743 735 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 SOX5P35711 763 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 NUDT1P36639 197 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 CCNHP51946 323 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-207ENST00000475549 NRG1Q02297 640 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-207ENST00000475549 SLC20A2Q08357 652 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 ZNF211Q13398 564 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-207ENST00000475549 COL9A2Q14055 689 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-207ENST00000475549 SETMARQ53H47 684 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-207ENST00000475549 SLC45A4Q5BKX6 768 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 ZNF542PQ5EBM4 170 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 CARD16Q5EG05 197 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 RETSATQ6NUM9 610 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 LEKR1Q6ZMV7 388 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 Q6ZSR6 202 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 APTXQ7Z2E3 356 aaKnown RBP7.16□□□□□ -1.26
HDAC3-207ENST00000475549 ABI3BPQ7Z7G0 1075 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 PDZD3Q86UT5 571 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 DRC7Q8IY82 874 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 PYROXD2Q8N2H3 581 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 OR6K2Q8NGY2 324 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 BAP1Q92560 729 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 ARHGEF2Q92974 986 aaKnown RBP7.16□□□□□ -1.26
HDAC3-207ENST00000475549 HEPHQ9BQS7 1158 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 C11orf70Q9BRQ4 267 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 C1QTNF2Q9BXJ5 285 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 CEP44Q9C0F1 390 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 KLC2Q9H0B6 622 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 OSBPL2Q9H1P3 480 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 ATP13A1Q9HD20 1204 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 NLRC4Q9NPP4 1024 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 GPR27Q9NS67 375 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 KLHL11Q9NVR0 708 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 DNAI1Q9UI46 699 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 GGT7Q9UJ14 662 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 PNMA8BQ9ULN7 279 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-207ENST00000475549 FADS3Q9Y5Q0 445 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 U3KQA8 63 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 PLXNB3Q9ULL4 1909 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 BPTFQ12830 3046 aa7.16□□□□□ -1.26
HDAC3-207ENST00000475549 A0A087WV48 116 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 IGLON5A6NGN9 336 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 C16orf96A6NNT2 1141 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 CASC3O15234 703 aaKnown RBP7.15□□□□□ -1.26
HDAC3-207ENST00000475549 TLX3O43711 291 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-207ENST00000475549 LRIG2O94898 1065 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 PCDH8O95206 1070 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 PRNPP04156 253 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 KRT3P12035 628 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 RHOQP17081 205 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 ITIH2P19823 946 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 ACP1P24666 158 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 ITGB7P26010 798 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 ITPKBP27987 946 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 ABL2P42684 1182 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 PTPN9P43378 593 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 DNA2P51530 1060 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 RPL7AP62424 266 aaKnown RBP7.15□□□□□ -1.26
HDAC3-207ENST00000475549 INSM1Q01101 510 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-207ENST00000475549 FZD2Q14332 565 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 NCAPHQ15003 741 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 CDO1Q16878 200 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 INAVAQ3KP66 663 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 ACBD5Q5T8D3 534 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-207ENST00000475549 HES3Q5TGS1 186 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 RWDD4Q6NW29 188 aaKnown RBP7.15□□□□□ -1.26
HDAC3-207ENST00000475549 WDR59Q6PJI9 974 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 PARS2Q7L3T8 475 aaKnown RBP7.15□□□□□ -1.26
HDAC3-207ENST00000475549 ZNF677Q86XU0 584 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 PHF13Q86YI8 300 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-207ENST00000475549 PLPP6Q8IY26 295 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 ARFGAP1Q8N6T3 406 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 PCDH20Q8N6Y1 951 aaKnown RBP7.15□□□□□ -1.26
HDAC3-207ENST00000475549 RFFLQ8WZ73 363 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 LRIG1Q96JA1 1093 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 DCBLD2Q96PD2 775 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 SLC17A9Q9BYT1 436 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 TM6SF2Q9BZW4 377 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 SCUBE2Q9NQ36 999 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 TMEM248Q9NWD8 314 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 HECAQ9UBI9 543 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-207ENST00000475549 DACH1Q9UI36 760 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 ITM2BQ9Y287 266 aa7.15□□□□□ -1.26
HDAC3-207ENST00000475549 PAXBP1Q9Y5B6 917 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms