RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 I6L893 689 aaPredicted RBP14.27□□□□□ -0.12
RPGR-206ENST00000474584 CRTAMO95727 393 aa14.27□□□□□ -0.12
RPGR-206ENST00000474584 CLPTM1O96005 669 aa14.27□□□□□ -0.12
RPGR-206ENST00000474584 JCHAINP01591 159 aa14.27□□□□□ -0.12
RPGR-206ENST00000474584 SMIM18P0DKX4 95 aa14.27□□□□□ -0.12
RPGR-206ENST00000474584 RGS2P41220 211 aa14.27□□□□□ -0.12
RPGR-206ENST00000474584 RPL5P46777 297 aaKnown RBP14.27□□□□□ -0.12
RPGR-206ENST00000474584 CLCN2P51788 898 aa14.27□□□□□ -0.12
RPGR-206ENST00000474584 NSUN2Q08J23 767 aaKnown RBP eCLIP14.27□□□□□ -0.12
RPGR-206ENST00000474584 CEACAM7Q14002 265 aa14.27□□□□□ -0.12
RPGR-206ENST00000474584 DUSP28Q4G0W2 176 aa14.27□□□□□ -0.12
RPGR-206ENST00000474584 TMEM198Q66K66 360 aa14.27□□□□□ -0.12
RPGR-206ENST00000474584 SLC41A1Q8IVJ1 513 aa14.27□□□□□ -0.12
RPGR-206ENST00000474584 CENPLQ8N0S6 344 aaPredicted RBP14.27□□□□□ -0.12
RPGR-206ENST00000474584 GTF3C2Q8WUA4 911 aaPredicted RBP14.27□□□□□ -0.12
RPGR-206ENST00000474584 PDCD6IPQ8WUM4 868 aaKnown RBP14.27□□□□□ -0.12
RPGR-206ENST00000474584 USP13Q92995 863 aaPredicted RBP14.27□□□□□ -0.12
RPGR-206ENST00000474584 ZFRQ96KR1 1074 aaKnown RBP14.27□□□□□ -0.12
RPGR-206ENST00000474584 NDNQ99608 321 aa14.27□□□□□ -0.12
RPGR-206ENST00000474584 COPS7BQ9H9Q2 264 aaPredicted RBP14.27□□□□□ -0.12
RPGR-206ENST00000474584 RRN3Q9NYV6 651 aa14.27□□□□□ -0.12
RPGR-206ENST00000474584 EPS15L1Q9UBC2 864 aa14.27□□□□□ -0.12
RPGR-206ENST00000474584 OR12D3Q9UGF7 316 aa14.27□□□□□ -0.12
RPGR-206ENST00000474584 AP4B1Q9Y6B7 739 aa14.27□□□□□ -0.12
RPGR-206ENST00000474584 SMIM35A0A1B0GVV1 85 aa14.27□□□□□ -0.13
RPGR-206ENST00000474584 UNCXA6NJT0 531 aa14.27□□□□□ -0.13
RPGR-206ENST00000474584 TRPC5OSA6NMA1 111 aa14.27□□□□□ -0.13
RPGR-206ENST00000474584 BCAS2O75934 225 aaPredicted RBP14.27□□□□□ -0.13
RPGR-206ENST00000474584 TNFAIP8O95379 198 aa14.27□□□□□ -0.13
RPGR-206ENST00000474584 F9P00740 461 aa14.27□□□□□ -0.13
RPGR-206ENST00000474584 STMN1P16949 149 aa14.27□□□□□ -0.13
RPGR-206ENST00000474584 SMPD1P17405 629 aa14.27□□□□□ -0.13
RPGR-206ENST00000474584 POLD2P49005 469 aa14.27□□□□□ -0.13
RPGR-206ENST00000474584 RPS6KA3P51812 740 aa14.27□□□□□ -0.13
RPGR-206ENST00000474584 RAB10P61026 200 aa14.27□□□□□ -0.13
RPGR-206ENST00000474584 R3HDM1Q15032 1099 aaKnown RBP14.27□□□□□ -0.13
RPGR-206ENST00000474584 WSCD1Q658N2 575 aa14.27□□□□□ -0.13
RPGR-206ENST00000474584 ZNF467Q7Z7K2 595 aaPredicted RBP14.27□□□□□ -0.13
RPGR-206ENST00000474584 DGCR14Q96DF8 476 aaKnown RBP14.27□□□□□ -0.13
RPGR-206ENST00000474584 COLEC11Q9BWP8 271 aa14.27□□□□□ -0.13
RPGR-206ENST00000474584 RNF39Q9H2S5 420 aa14.27□□□□□ -0.13
RPGR-206ENST00000474584 NCKIPSDQ9NZQ3 722 aa14.27□□□□□ -0.13
RPGR-206ENST00000474584 AAR2Q9Y312 384 aaKnown RBP14.27□□□□□ -0.13
RPGR-206ENST00000474584 MYLKQ15746 1914 aa14.27□□□□□ -0.13
RPGR-206ENST00000474584 DLX3O60479 287 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 SNAI1O95863 264 aaPredicted RBP14.26□□□□□ -0.13
RPGR-206ENST00000474584 AHSGP02765 367 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 YBX3P16989 372 aaKnown RBP eCLIP14.26□□□□□ -0.13
RPGR-206ENST00000474584 MSX2P35548 267 aaPredicted RBP14.26□□□□□ -0.13
RPGR-206ENST00000474584 KPNA2P52292 529 aaKnown RBP14.26□□□□□ -0.13
RPGR-206ENST00000474584 COG7P83436 770 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 PCID2Q5JVF3 399 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 LSMEM2Q8N112 164 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 AHI1Q8N157 1196 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 RNF148Q8N7C7 305 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 CCNYL1Q8N7R7 359 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 TMA16Q96EY4 203 aaKnown RBP14.26□□□□□ -0.13
RPGR-206ENST00000474584 MARK4Q96L34 752 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 CNBD2Q96M20 576 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 PRICKLE1Q96MT3 831 aaPredicted RBP14.26□□□□□ -0.13
RPGR-206ENST00000474584 MRPS26Q9BYN8 205 aaKnown RBP14.26□□□□□ -0.13
RPGR-206ENST00000474584 WDCPQ9H6R7 721 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 MRGBPQ9NV56 204 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 PLK2Q9NYY3 685 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 COPG1Q9Y678 874 aaKnown RBP14.26□□□□□ -0.13
RPGR-206ENST00000474584 TARM1B6A8C7 271 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 NPHS1O60500 1241 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 VAPBO95292 243 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 JUNP05412 331 aaKnown RBP14.26□□□□□ -0.13
RPGR-206ENST00000474584 USP17L7P0C7H9 530 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 SMIM10L2AP0DMW4 78 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 SMIM10L2BP0DMW5 78 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 LAMB3Q13751 1172 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 PTK2BQ14289 1009 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.26□□□□□ -0.13
RPGR-206ENST00000474584 PKN3Q6P5Z2 889 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 TICAM1Q8IUC6 712 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 CNTN4Q8IWV2 1026 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.26□□□□□ -0.13
RPGR-206ENST00000474584 TKTL2Q9H0I9 626 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 MRPL46Q9H2W6 279 aaKnown RBP14.26□□□□□ -0.13
RPGR-206ENST00000474584 UBAP1Q9NZ09 502 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 CLIC5Q9NZA1 410 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 LZTS1Q9Y250 596 aa14.26□□□□□ -0.13
RPGR-206ENST00000474584 PRSS51A0A1B0GVH4 220 aa14.25□□□□□ -0.13
RPGR-206ENST00000474584 FAM95CA0A1B0GW59 222 aa14.25□□□□□ -0.13
RPGR-206ENST00000474584 GABRDO14764 452 aa14.25□□□□□ -0.13
RPGR-206ENST00000474584 LRIG2O94898 1065 aa14.25□□□□□ -0.13
RPGR-206ENST00000474584 FAM163BP0C2L3 166 aa14.25□□□□□ -0.13
RPGR-206ENST00000474584 DPP6P42658 865 aa14.25□□□□□ -0.13
RPGR-206ENST00000474584 PGGT1BP53609 377 aa14.25□□□□□ -0.13
RPGR-206ENST00000474584 MS4A2Q01362 244 aa14.25□□□□□ -0.13
RPGR-206ENST00000474584 ZNF33AQ06730 810 aa14.25□□□□□ -0.13
RPGR-206ENST00000474584 SNX17Q15036 470 aa14.25□□□□□ -0.13
RPGR-206ENST00000474584 SH2D4BQ5SQS7 431 aa14.25□□□□□ -0.13
RPGR-206ENST00000474584 PIWIL4Q7Z3Z4 852 aaKnown RBP14.25□□□□□ -0.13
RPGR-206ENST00000474584 FAM35AQ86V20 835 aa14.25□□□□□ -0.13
RPGR-206ENST00000474584 PPHLN1Q8NEY8 458 aaKnown RBP14.25□□□□□ -0.13
RPGR-206ENST00000474584 NMD3Q96D46 503 aaKnown RBP14.25□□□□□ -0.13
RPGR-206ENST00000474584 CELF6Q96J87 481 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms