RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 ACSL4O60488 711 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 TLR5O60602 858 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 PQBP1O60828 265 aaKnown RBP9.95□□□□□ -0.82
USP39-214ENST00000474572 SERPINE1P05121 402 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 NEFHP12036 1026 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 ALOX15P16050 662 aaPredicted RBP9.95□□□□□ -0.82
USP39-214ENST00000474572 TPH1P17752 444 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 PAMP19021 973 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 TACR2P21452 398 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 GRK2P25098 689 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 TUFMP49411 452 aaKnown RBP9.95□□□□□ -0.82
USP39-214ENST00000474572 HARS2P49590 506 aaKnown RBP9.95□□□□□ -0.82
USP39-214ENST00000474572 ARPP19P56211 112 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 WNT3AP56704 352 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 PDE1BQ01064 536 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 SLC10A7Q0GE19 358 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 STX3Q13277 289 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 SERINC3Q13530 473 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 BTG3Q14201 252 aaPredicted RBP9.95□□□□□ -0.82
USP39-214ENST00000474572 IHHQ14623 411 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 GRM3Q14832 879 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 KRT72Q14CN4 511 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 UGP2Q16851 508 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 USP41Q3LFD5 358 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 TAF1BQ53T94 588 aaPredicted RBP9.95□□□□□ -0.82
USP39-214ENST00000474572 C10orf120Q5SQS8 335 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 MARC1Q5VT66 337 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 CNKSR3Q6P9H4 555 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 CMC1Q7Z7K0 106 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 GALNT7Q86SF2 657 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 CRLF3Q8IUI8 442 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 PARP9Q8IXQ6 854 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 PLD6Q8N2A8 252 aaKnown RBP9.95□□□□□ -0.82
USP39-214ENST00000474572 C2CD4AQ8NCU7 369 aaPredicted RBP9.95□□□□□ -0.82
USP39-214ENST00000474572 ARRDC2Q8TBH0 407 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 MAGEC3Q8TD91 643 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 GPR152Q8TDT2 470 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 ZNF689Q96CS4 500 aaPredicted RBP9.95□□□□□ -0.82
USP39-214ENST00000474572 MYEOVQ96EZ4 313 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 TRMT2BQ96GJ1 504 aaKnown RBP9.95□□□□□ -0.82
USP39-214ENST00000474572 IGSF21Q96ID5 467 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 MYRFLQ96LU7 910 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 DEFB118Q96PH6 123 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 TUBB6Q9BUF5 446 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 HERC2P3Q9BVR0 1158 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 C1QTNF1Q9BXJ1 281 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 C20orf27Q9GZN8 174 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 CRISPLD2Q9H0B8 497 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 CCSER2Q9H7U1 834 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 SP110Q9HB58 689 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 RC3H2Q9HBD1 1191 aaKnown RBP9.95□□□□□ -0.82
USP39-214ENST00000474572 IARS2Q9NSE4 1012 aaKnown RBP9.95□□□□□ -0.82
USP39-214ENST00000474572 ZFP69BQ9UJL9 534 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 MID2Q9UJV3 735 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 DCTN4Q9UJW0 460 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 TBX21Q9UL17 535 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 PTPRSQ13332 1948 aa9.95□□□□□ -0.82
USP39-214ENST00000474572 A0A096LPK6 155 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 A0A0G2JND7 137 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 LOC285095A0A1B0GVY8 99 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 HEATR9A2RTY3 570 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 G3V2L1 256 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 PRAMEF11O60813 436 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 RAMP2O60895 175 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 HAUS5O94927 633 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 ABLIM3O94929 683 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 SOD2P04179 222 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 C2P06681 752 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 KRT16P08779 473 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 MYL2P10916 166 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 COL6A2P12110 1019 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 CCL5P13501 91 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 HMGA1P17096 107 aaKnown RBP9.94□□□□□ -0.82
USP39-214ENST00000474572 GABRB3P28472 473 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 RFC2P35250 354 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 PBX3P40426 434 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 CCL23P55773 120 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 ACVR1Q04771 509 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 PPM1JQ5JR12 505 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 TPGS2Q68CL5 300 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 ESRP1Q6NXG1 681 aaKnown RBP9.94□□□□□ -0.82
USP39-214ENST00000474572 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.94□□□□□ -0.82
USP39-214ENST00000474572 KIAA0408Q6ZU52 694 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 CCDC91Q7Z6B0 441 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 TFAP2DQ7Z6R9 452 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 TBC1D1Q86TI0 1168 aaPredicted RBP9.94□□□□□ -0.82
USP39-214ENST00000474572 MIB1Q86YT6 1006 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 PGBD5Q8N414 524 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 RDH11Q8TC12 318 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 GIPC2Q8TF65 315 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 STON2Q8WXE9 905 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 PEX13Q92968 403 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 PSMG2Q969U7 264 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 UTP4Q969X6 686 aaKnown RBP9.94□□□□□ -0.82
USP39-214ENST00000474572 PLD4Q96BZ4 506 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 PTCD3Q96EY7 689 aaKnown RBP9.94□□□□□ -0.82
USP39-214ENST00000474572 SORT1Q99523 831 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 CLSTN3Q9BQT9 956 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 FAM167BQ9BTA0 163 aa9.94□□□□□ -0.82
USP39-214ENST00000474572 FSD1LQ9BXM9 530 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms