RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 FAM174AQ8TBP5 190 aa20.76■□□□□ 0.91
PDLIM4-206ENST00000474421 NAT10Q9H0A0 1025 aaKnown RBP20.76■□□□□ 0.91
PDLIM4-206ENST00000474421 MAGEH1Q9H213 219 aa20.76■□□□□ 0.91
PDLIM4-206ENST00000474421 TMEM248Q9NWD8 314 aa20.76■□□□□ 0.91
PDLIM4-206ENST00000474421 ACACAQ13085 2346 aa20.75■□□□□ 0.91
PDLIM4-206ENST00000474421 SIGLEC16A6NMB1 481 aa20.75■□□□□ 0.91
PDLIM4-206ENST00000474421 SLC31A1O15431 190 aa20.75■□□□□ 0.91
PDLIM4-206ENST00000474421 LRIG2O94898 1065 aa20.75■□□□□ 0.91
PDLIM4-206ENST00000474421 HNRNPA2B1P22626 353 aaKnown RBP20.75■□□□□ 0.91
PDLIM4-206ENST00000474421 RFC1P35251 1148 aaPredicted RBP20.75■□□□□ 0.91
PDLIM4-206ENST00000474421 CCNHP51946 323 aaPredicted RBP20.75■□□□□ 0.91
PDLIM4-206ENST00000474421 HDAC4P56524 1084 aa20.75■□□□□ 0.91
PDLIM4-206ENST00000474421 ZNF284Q2VY69 593 aa20.75■□□□□ 0.91
PDLIM4-206ENST00000474421 TMPRSS12Q86WS5 348 aa20.75■□□□□ 0.91
PDLIM4-206ENST00000474421 LRIG1Q96JA1 1093 aa20.75■□□□□ 0.91
PDLIM4-206ENST00000474421 AGPAT1Q99943 283 aa20.75■□□□□ 0.91
PDLIM4-206ENST00000474421 WASF2Q9Y6W5 498 aa20.75■□□□□ 0.91
PDLIM4-206ENST00000474421 ARID1BQ8NFD5 2236 aaPredicted RBP20.75■□□□□ 0.91
PDLIM4-206ENST00000474421 RAMP2O60895 175 aa20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 GJB6O95452 261 aa20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 FERP16591 822 aa20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 DESP17661 470 aa20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 L1CAMP32004 1257 aa20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 ACVRL1P37023 503 aa20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 BNIP3Q12983 259 aa20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 POLD3Q15054 466 aaPredicted RBP20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 RAB6CQ53S08 254 aa20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 SFMBT2Q5VUG0 894 aa20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 KIAA1161Q6NSJ0 714 aa20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 PPP1R2P3Q6NXS1 205 aa20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 DNAJC24Q6P3W2 148 aa20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 FBXL19Q6PCT2 694 aa20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 WDR59Q6PJI9 974 aa20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 DHRS13Q6UX07 377 aa20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 MON1BQ7L1V2 547 aa20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 SLFN11Q7Z7L1 901 aa20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 CCDC185Q8N715 623 aa20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 ARHGEF2Q92974 986 aaKnown RBP20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 FEM1CQ96JP0 617 aa20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 RAB6CQ9H0N0 254 aa20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 HECAQ9UBI9 543 aaPredicted RBP20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 DNAI1Q9UI46 699 aa20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 FCF1Q9Y324 198 aaKnown RBP20.74■□□□□ 0.91
PDLIM4-206ENST00000474421 ZSCAN5CA6NGD5 496 aaPredicted RBP20.73■□□□□ 0.91
PDLIM4-206ENST00000474421 AP1G1O43747 822 aa20.73■□□□□ 0.91
PDLIM4-206ENST00000474421 RFPL3O75679 317 aa20.73■□□□□ 0.91
PDLIM4-206ENST00000474421 THEGLP0DJG4 465 aa20.73■□□□□ 0.91
PDLIM4-206ENST00000474421 ADRB3P13945 408 aa20.73■□□□□ 0.91
PDLIM4-206ENST00000474421 PRLRP16471 622 aa20.73■□□□□ 0.91
PDLIM4-206ENST00000474421 ZNF143P52747 638 aaPredicted RBP20.73■□□□□ 0.91
PDLIM4-206ENST00000474421 AIF1P55008 147 aa20.73■□□□□ 0.91
PDLIM4-206ENST00000474421 RPS21P63220 83 aaKnown RBP20.73■□□□□ 0.91
PDLIM4-206ENST00000474421 NCAPHQ15003 741 aa20.73■□□□□ 0.91
PDLIM4-206ENST00000474421 EFHC2Q5JST6 749 aa20.73■□□□□ 0.91
PDLIM4-206ENST00000474421 KLK6Q92876 244 aa20.73■□□□□ 0.91
PDLIM4-206ENST00000474421 KLHL11Q9NVR0 708 aa20.73■□□□□ 0.91
PDLIM4-206ENST00000474421 DKK4Q9UBT3 224 aa20.73■□□□□ 0.91
PDLIM4-206ENST00000474421 FAM72CH0Y354 149 aa20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 TAF4O00268 1085 aa20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 GSRP00390 522 aa20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 HNF1BP35680 557 aa20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 SNRPD1P62314 119 aaKnown RBP20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 ILKQ13418 452 aa20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 TMEM259Q4ZIN3 620 aa20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 HS1BP3Q53T59 392 aa20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 FAM72AQ5TYM5 149 aa20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 FAM72DQ6L9T8 149 aa20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 APTXQ7Z2E3 356 aaKnown RBP20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 KANSL1Q7Z3B3 1105 aa20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 FAM72BQ86X60 149 aa20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 DCP2Q8IU60 420 aaKnown RBP20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 RYBPQ8N488 228 aaPredicted RBP20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 PDCD7Q8N8D1 485 aaKnown RBP20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 RAB7BQ96AH8 199 aa20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 OSBPL1AQ9BXW6 950 aa20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 TM6SF2Q9BZW4 377 aa20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 ZDHHC6Q9H6R6 413 aa20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 NDFIP2Q9NV92 336 aa20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 MYO6Q9UM54 1294 aa20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 NEU3Q9UQ49 428 aa20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 CA5BQ9Y2D0 317 aa20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 FADS3Q9Y5Q0 445 aa20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 HS3ST3A1Q9Y663 406 aa20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 DSPP15924 2871 aaKnown RBP20.72■□□□□ 0.91
PDLIM4-206ENST00000474421 RNF103O00237 685 aa20.71■□□□□ 0.91
PDLIM4-206ENST00000474421 KDELR3O43731 214 aa20.71■□□□□ 0.91
PDLIM4-206ENST00000474421 CD160O95971 181 aa20.71■□□□□ 0.91
PDLIM4-206ENST00000474421 ACADVLP49748 655 aa20.71■□□□□ 0.91
PDLIM4-206ENST00000474421 TYRO3Q06418 890 aa20.71■□□□□ 0.91
PDLIM4-206ENST00000474421 DNAJC3Q13217 504 aa20.71■□□□□ 0.91
PDLIM4-206ENST00000474421 DCUN1D2Q6PH85 259 aa20.71■□□□□ 0.91
PDLIM4-206ENST00000474421 ABI3BPQ7Z7G0 1075 aa20.71■□□□□ 0.91
PDLIM4-206ENST00000474421 AOPEPQ8N6M6 819 aa20.71■□□□□ 0.91
PDLIM4-206ENST00000474421 OR2AP1Q8NGE2 309 aa20.71■□□□□ 0.91
PDLIM4-206ENST00000474421 CASKIN2Q8WXE0 1202 aa20.71■□□□□ 0.91
PDLIM4-206ENST00000474421 TSC1Q92574 1164 aa20.71■□□□□ 0.91
PDLIM4-206ENST00000474421 IFT43Q96FT9 208 aa20.71■□□□□ 0.91
PDLIM4-206ENST00000474421 EPAS1Q99814 870 aa20.71■□□□□ 0.91
PDLIM4-206ENST00000474421 MYOCQ99972 504 aa20.71■□□□□ 0.91
PDLIM4-206ENST00000474421 CNPY3Q9BT09 278 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms