RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 CASKIN2Q8WXE0 1202 aa14.48□□□□□ -0.09
VAMP4-203ENST00000474047 NOL6Q9H6R4 1146 aaKnown RBP14.48□□□□□ -0.09
VAMP4-203ENST00000474047 ZDHHC6Q9H6R6 413 aa14.48□□□□□ -0.09
VAMP4-203ENST00000474047 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.48□□□□□ -0.09
VAMP4-203ENST00000474047 DMDP11532 3685 aa14.48□□□□□ -0.09
VAMP4-203ENST00000474047 C4orf47A7E2U8 309 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 KRIT1O00522 736 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 SLC7A4O43246 635 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 LEFTY1O75610 366 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 PROSCO94903 275 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 TCF4P15884 667 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 ENGP17813 658 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 DRD3P35462 400 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 CCNHP51946 323 aaPredicted RBP14.47□□□□□ -0.09
VAMP4-203ENST00000474047 METAP1P53582 386 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 LIMK1P53667 647 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 ADPRHP54922 357 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 CDH6P55285 790 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 RHOAP61586 193 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 MESDQ14696 234 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 SPA17Q15506 151 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 TEAD4Q15561 434 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 DPYSL2Q16555 572 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 TMCO3Q6UWJ1 677 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 ADAT2Q7Z6V5 191 aaKnown RBP14.47□□□□□ -0.09
VAMP4-203ENST00000474047 LZTR1Q8N653 840 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 KCTD6Q8NC69 237 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 SLC39A8Q9C0K1 460 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 LUC7LQ9NQ29 371 aaKnown RBP14.47□□□□□ -0.09
VAMP4-203ENST00000474047 FSCN3Q9NQT6 498 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 DLL3Q9NYJ7 618 aa14.47□□□□□ -0.09
VAMP4-203ENST00000474047 UBA2Q9UBT2 640 aaPredicted RBP14.47□□□□□ -0.09
VAMP4-203ENST00000474047 ARHGAP33O14559 1287 aa14.46□□□□□ -0.09
VAMP4-203ENST00000474047 TMCC1O94876 653 aa14.46□□□□□ -0.09
VAMP4-203ENST00000474047 POP4O95707 220 aaKnown RBP14.46□□□□□ -0.09
VAMP4-203ENST00000474047 CTSLP07711 333 aa14.46□□□□□ -0.09
VAMP4-203ENST00000474047 KCNA4P22459 653 aa14.46□□□□□ -0.09
VAMP4-203ENST00000474047 CD27P26842 260 aa14.46□□□□□ -0.09
VAMP4-203ENST00000474047 PAPOLAP51003 745 aaKnown RBP14.46□□□□□ -0.09
VAMP4-203ENST00000474047 INO80DQ53TQ3 878 aaPredicted RBP14.46□□□□□ -0.09
VAMP4-203ENST00000474047 RHOT2Q8IXI1 618 aa14.46□□□□□ -0.09
VAMP4-203ENST00000474047 OR2AP1Q8NGE2 309 aa14.46□□□□□ -0.09
VAMP4-203ENST00000474047 GDAP1L1Q96MZ0 367 aa14.46□□□□□ -0.09
VAMP4-203ENST00000474047 KLC2Q9H0B6 622 aa14.46□□□□□ -0.09
VAMP4-203ENST00000474047 KDM4CQ9H3R0 1056 aa14.46□□□□□ -0.09
VAMP4-203ENST00000474047 LRRC19Q9H756 370 aa14.46□□□□□ -0.09
VAMP4-203ENST00000474047 SP110Q9HB58 689 aa14.46□□□□□ -0.09
VAMP4-203ENST00000474047 OSGEPQ9NPF4 335 aa14.46□□□□□ -0.09
VAMP4-203ENST00000474047 DCDC2BA2VCK2 349 aa14.46□□□□□ -0.1
VAMP4-203ENST00000474047 ZNF821O75541 412 aaPredicted RBP14.46□□□□□ -0.1
VAMP4-203ENST00000474047 CD160O95971 181 aa14.46□□□□□ -0.1
VAMP4-203ENST00000474047 IGSF6O95976 241 aa14.46□□□□□ -0.1
VAMP4-203ENST00000474047 GSRP00390 522 aa14.46□□□□□ -0.1
VAMP4-203ENST00000474047 KRT7P08729 469 aa14.46□□□□□ -0.1
VAMP4-203ENST00000474047 AMPD1P23109 780 aa14.46□□□□□ -0.1
VAMP4-203ENST00000474047 CYLC1P35663 651 aaPredicted RBP14.46□□□□□ -0.1
VAMP4-203ENST00000474047 MAGEA1P43355 309 aa14.46□□□□□ -0.1
VAMP4-203ENST00000474047 AFF3P51826 1226 aaKnown RBP14.46□□□□□ -0.1
VAMP4-203ENST00000474047 SLC25A11Q02978 314 aaKnown RBP14.46□□□□□ -0.1
VAMP4-203ENST00000474047 MYLK3Q32MK0 819 aa14.46□□□□□ -0.1
VAMP4-203ENST00000474047 TXNRD3NBQ6F5E7 133 aa14.46□□□□□ -0.1
VAMP4-203ENST00000474047 FBXL19Q6PCT2 694 aa14.46□□□□□ -0.1
VAMP4-203ENST00000474047 ERN2Q76MJ5 926 aaKnown RBP14.46□□□□□ -0.1
VAMP4-203ENST00000474047 POLNQ7Z5Q5 900 aa14.46□□□□□ -0.1
VAMP4-203ENST00000474047 PRPF39Q86UA1 669 aaKnown RBP14.46□□□□□ -0.1
VAMP4-203ENST00000474047 MAP7D3Q8IWC1 876 aa14.46□□□□□ -0.1
VAMP4-203ENST00000474047 PLPP6Q8IY26 295 aa14.46□□□□□ -0.1
VAMP4-203ENST00000474047 OR6K2Q8NGY2 324 aa14.46□□□□□ -0.1
VAMP4-203ENST00000474047 CSPG4P5Q96PW8 444 aa14.46□□□□□ -0.1
VAMP4-203ENST00000474047 CALN1Q9BXU9 219 aa14.46□□□□□ -0.1
VAMP4-203ENST00000474047 CAPN10Q9HC96 672 aa14.46□□□□□ -0.1
VAMP4-203ENST00000474047 PCDH18Q9HCL0 1135 aa14.46□□□□□ -0.1
VAMP4-203ENST00000474047 INTUQ9ULD6 942 aa14.46□□□□□ -0.1
VAMP4-203ENST00000474047 TPX2Q9ULW0 747 aaKnown RBP14.46□□□□□ -0.1
VAMP4-203ENST00000474047 CHD5Q8TDI0 1954 aa14.45□□□□□ -0.1
VAMP4-203ENST00000474047 CFAP54Q96N23 3096 aa14.45□□□□□ -0.1
VAMP4-203ENST00000474047 PLRG1O43660 514 aaKnown RBP14.45□□□□□ -0.1
VAMP4-203ENST00000474047 IPO7O95373 1038 aaKnown RBP14.45□□□□□ -0.1
VAMP4-203ENST00000474047 ARHGAP25P42331 645 aa14.45□□□□□ -0.1
VAMP4-203ENST00000474047 NOP2P46087 812 aaKnown RBP14.45□□□□□ -0.1
VAMP4-203ENST00000474047 CSNK1EP49674 416 aaKnown RBP14.45□□□□□ -0.1
VAMP4-203ENST00000474047 CCR5P51681 352 aa14.45□□□□□ -0.1
VAMP4-203ENST00000474047 DPYSQ14117 519 aa14.45□□□□□ -0.1
VAMP4-203ENST00000474047 ODF2Q5BJF6 829 aa14.45□□□□□ -0.1
VAMP4-203ENST00000474047 ATXN7L2Q5T6C5 722 aaPredicted RBP14.45□□□□□ -0.1
VAMP4-203ENST00000474047 CCDC170Q8IYT3 715 aa14.45□□□□□ -0.1
VAMP4-203ENST00000474047 NETO2Q8NC67 525 aa14.45□□□□□ -0.1
VAMP4-203ENST00000474047 RFFLQ8WZ73 363 aa14.45□□□□□ -0.1
VAMP4-203ENST00000474047 ARRDC3Q96B67 414 aa14.45□□□□□ -0.1
VAMP4-203ENST00000474047 SKA1Q96BD8 255 aa14.45□□□□□ -0.1
VAMP4-203ENST00000474047 LRIG1Q96JA1 1093 aa14.45□□□□□ -0.1
VAMP4-203ENST00000474047 PANX2Q96RD6 677 aa14.45□□□□□ -0.1
VAMP4-203ENST00000474047 ZDHHC5Q9C0B5 715 aa14.45□□□□□ -0.1
VAMP4-203ENST00000474047 AASDHPPTQ9NRN7 309 aa14.45□□□□□ -0.1
VAMP4-203ENST00000474047 WASF2Q9Y6W5 498 aa14.45□□□□□ -0.1
VAMP4-203ENST00000474047 A0A1W2PPC4 97 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 J3KR12 359 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 PRAMEF11O60813 436 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 PALMO75781 387 aa14.44□□□□□ -0.1
VAMP4-203ENST00000474047 PCDH8O95206 1070 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms