RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 CDH4P55283 916 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 YBEYP58557 167 aaPredicted RBP18.28■□□□□ 0.52
VARS2-206ENST00000473916 CREMQ03060 361 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 MGAT5Q09328 741 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 LBRQ14739 615 aaKnown RBP18.28■□□□□ 0.52
VARS2-206ENST00000473916 RABGAP1LQ5R372 815 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 ARRDC2Q8TBH0 407 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 FATE1Q969F0 183 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 TGS1Q96RS0 853 aaKnown RBP18.28■□□□□ 0.52
VARS2-206ENST00000473916 SPON2Q9BUD6 331 aa18.28■□□□□ 0.52
VARS2-206ENST00000473916 SSU72Q9NP77 194 aaKnown RBP18.28■□□□□ 0.52
VARS2-206ENST00000473916 FAM237BA0A1B0GVD1 139 aa18.27■□□□□ 0.52
VARS2-206ENST00000473916 A0A1W2PRU2 124 aa18.27■□□□□ 0.52
VARS2-206ENST00000473916 PSMD3O43242 534 aa18.27■□□□□ 0.52
VARS2-206ENST00000473916 OLFM2O95897 454 aa18.27■□□□□ 0.52
VARS2-206ENST00000473916 LRG1P02750 347 aa18.27■□□□□ 0.52
VARS2-206ENST00000473916 ADH1AP07327 375 aa18.27■□□□□ 0.52
VARS2-206ENST00000473916 GBP2P32456 591 aaPredicted RBP18.27■□□□□ 0.52
VARS2-206ENST00000473916 BMPR1AP36894 532 aa18.27■□□□□ 0.52
VARS2-206ENST00000473916 NEK3P51956 506 aa18.27■□□□□ 0.52
VARS2-206ENST00000473916 SLC18A2Q05940 514 aa18.27■□□□□ 0.52
VARS2-206ENST00000473916 IL31Q6EBC2 164 aa18.27■□□□□ 0.52
VARS2-206ENST00000473916 PSRC1Q6PGN9 363 aaPredicted RBP18.27■□□□□ 0.52
VARS2-206ENST00000473916 RANBP10Q6VN20 620 aa18.27■□□□□ 0.52
VARS2-206ENST00000473916 GPR65Q8IYL9 337 aa18.27■□□□□ 0.52
VARS2-206ENST00000473916 HERVK_113Q902F9 699 aa18.27■□□□□ 0.52
VARS2-206ENST00000473916 APOPT1Q96IL0 206 aa18.27■□□□□ 0.52
VARS2-206ENST00000473916 SMG9Q9H0W8 520 aaKnown RBP18.27■□□□□ 0.52
VARS2-206ENST00000473916 ZFATQ9P243 1243 aa18.27■□□□□ 0.52
VARS2-206ENST00000473916 SLC2A6Q9UGQ3 507 aa18.27■□□□□ 0.52
VARS2-206ENST00000473916 FAM169AQ9Y6X4 670 aa18.27■□□□□ 0.52
VARS2-206ENST00000473916 WDR91A4D1P6 747 aa18.27■□□□□ 0.51
VARS2-206ENST00000473916 C2orf71A6NGG8 1288 aa18.27■□□□□ 0.51
VARS2-206ENST00000473916 LPXNO60711 386 aa18.27■□□□□ 0.51
VARS2-206ENST00000473916 TAC1P20366 129 aa18.27■□□□□ 0.51
VARS2-206ENST00000473916 GMPRP36959 345 aa18.27■□□□□ 0.51
VARS2-206ENST00000473916 SLC18A1P54219 525 aa18.27■□□□□ 0.51
VARS2-206ENST00000473916 MTA1Q13330 715 aa18.27■□□□□ 0.51
VARS2-206ENST00000473916 HSP90AA5PQ58FG0 334 aa18.27■□□□□ 0.51
VARS2-206ENST00000473916 CXorf57Q6NSI4 855 aaKnown RBP18.27■□□□□ 0.51
VARS2-206ENST00000473916 POF1BQ8WVV4 589 aa18.27■□□□□ 0.51
VARS2-206ENST00000473916 ATXN7L3BQ96GX2 97 aa18.27■□□□□ 0.51
VARS2-206ENST00000473916 CORO1BQ9BR76 489 aa18.27■□□□□ 0.51
VARS2-206ENST00000473916 ANKRD36A6QL64 1941 aa18.26■□□□□ 0.51
VARS2-206ENST00000473916 MYOFQ9NZM1 2061 aa18.26■□□□□ 0.51
VARS2-206ENST00000473916 LINC01553A4QN01 128 aa18.26■□□□□ 0.51
VARS2-206ENST00000473916 KRT38O76015 456 aa18.26■□□□□ 0.51
VARS2-206ENST00000473916 IRS1P35568 1242 aa18.26■□□□□ 0.51
VARS2-206ENST00000473916 CCR2P41597 374 aa18.26■□□□□ 0.51
VARS2-206ENST00000473916 MPP3Q13368 585 aa18.26■□□□□ 0.51
VARS2-206ENST00000473916 FSCBQ5H9T9 825 aa18.26■□□□□ 0.51
VARS2-206ENST00000473916 TMCO4Q5TGY1 634 aa18.26■□□□□ 0.51
VARS2-206ENST00000473916 FAM109BQ6ICB4 259 aaPredicted RBP18.26■□□□□ 0.51
VARS2-206ENST00000473916 CDKL2Q92772 493 aa18.26■□□□□ 0.51
VARS2-206ENST00000473916 MAGEB18Q96M61 343 aa18.26■□□□□ 0.51
VARS2-206ENST00000473916 NSMCE3Q96MG7 304 aa18.26■□□□□ 0.51
VARS2-206ENST00000473916 SEMA3CQ99985 751 aa18.26■□□□□ 0.51
VARS2-206ENST00000473916 KIFC1Q9BW19 673 aa18.26■□□□□ 0.51
VARS2-206ENST00000473916 SLC13A1Q9BZW2 595 aa18.26■□□□□ 0.51
VARS2-206ENST00000473916 PCMTD2Q9NV79 361 aa18.26■□□□□ 0.51
VARS2-206ENST00000473916 MAFFQ9ULX9 164 aa18.26■□□□□ 0.51
VARS2-206ENST00000473916 HELZP42694 1942 aaKnown RBP18.26■□□□□ 0.51
VARS2-206ENST00000473916 NOTCH4Q99466 2003 aa18.26■□□□□ 0.51
VARS2-206ENST00000473916 GRXCR1A8MXD5 290 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 TBL1XO60907 577 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 CLDN11O75508 207 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 RFPL2O75678 378 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 ZWINTO95229 277 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 ALDOAP04075 364 aaKnown RBP18.25■□□□□ 0.51
VARS2-206ENST00000473916 RHOCP08134 193 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 MYL4P12829 197 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 RGRP47804 291 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 IL9RQ01113 521 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 HHATQ5VTY9 493 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 KCNMB4Q86W47 210 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 RNF135Q8IUD6 432 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 SPPL3Q8TCT6 385 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 WFDC5Q8TCV5 224 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 NSMCE1Q8WV22 266 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 SEC16BQ96JE7 1060 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 FAM111AQ96PZ2 611 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 MAGEH1Q9H213 219 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 C20orf96Q9NUD7 363 aaPredicted RBP18.25■□□□□ 0.51
VARS2-206ENST00000473916 SSX2IPQ9Y2D8 614 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 C5orf42Q9H799 3197 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.25■□□□□ 0.51
VARS2-206ENST00000473916 A0A1B0GVM2 712 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 TCAF2A6NFQ2 919 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 ANKRD65E5RJM6 399 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 GLUD1P00367 558 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 CKMP06732 381 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 TNK2Q07912 1038 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 ZNF177Q13360 481 aaPredicted RBP18.25■□□□□ 0.51
VARS2-206ENST00000473916 CAMK1Q14012 370 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 SEPT6Q14141 434 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 ZNF235Q14590 738 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 PABPC1LQ4VXU2 614 aaKnown RBP18.25■□□□□ 0.51
VARS2-206ENST00000473916 TEDDM1Q5T9Z0 273 aa18.25■□□□□ 0.51
VARS2-206ENST00000473916 RNF219Q5W0B1 726 aaPredicted RBP18.25■□□□□ 0.51
VARS2-206ENST00000473916 ESRP1Q6NXG1 681 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms