RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 RASSF3Q86WH2 238 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 CDKL3Q8IVW4 592 aaPredicted RBP9.27□□□□□ -0.93
SMG5-203ENST00000473643 CCDC13Q8IYE1 715 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 APCDD1Q8J025 514 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 CCDC33Q8N5R6 958 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 FAM160A2Q8N612 972 aaPredicted RBP9.27□□□□□ -0.93
SMG5-203ENST00000473643 TEX26Q8N6G2 289 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 ALLCQ8N6M5 410 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 TERB1Q8NA31 727 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 KDM1BQ8NB78 822 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 NETO2Q8NC67 525 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 ATL2Q8NHH9 583 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 TFB1MQ8WVM0 346 aaKnown RBP9.27□□□□□ -0.93
SMG5-203ENST00000473643 CASKIN2Q8WXE0 1202 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 ATG4AQ8WYN0 398 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 SLCO2A1Q92959 643 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 MAGOHBQ96A72 148 aaKnown RBP9.27□□□□□ -0.93
SMG5-203ENST00000473643 RTP4Q96DX8 246 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 LOXL4Q96JB6 756 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 ZC3H10Q96K80 434 aaKnown RBP9.27□□□□□ -0.93
SMG5-203ENST00000473643 RUNDC3BQ96NL0 473 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 HHIPQ96QV1 700 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 LGMNQ99538 433 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 HINFPQ9BQA5 517 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 SPON2Q9BUD6 331 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 C2orf49Q9BVC5 232 aaPredicted RBP9.27□□□□□ -0.93
SMG5-203ENST00000473643 MUC3BQ9H195 1237 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 ATP13A1Q9HD20 1204 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 RRAGDQ9NQL2 400 aaPredicted RBP9.27□□□□□ -0.93
SMG5-203ENST00000473643 PCYOX1Q9UHG3 505 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 VPS28Q9UK41 221 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 GMEB2Q9UKD1 530 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 HPCAL4Q9UM19 191 aa9.27□□□□□ -0.93
SMG5-203ENST00000473643 CTAGE15A4D2H0 777 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 C5orf60A6NFR6 353 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 PRRT4C9JH25 899 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 H7C0C1 242 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 J3KR12 359 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 KLF8O95600 359 aaPredicted RBP9.26□□□□□ -0.93
SMG5-203ENST00000473643 ASLP04424 464 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 SRPRAP08240 638 aaKnown RBP9.26□□□□□ -0.93
SMG5-203ENST00000473643 CTAGE8P0CG41 777 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 POLR2EP19388 210 aaKnown RBP9.26□□□□□ -0.93
SMG5-203ENST00000473643 RBL1P28749 1068 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 TIE1P35590 1138 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 ATP5OP48047 213 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 GEMIN4P57678 1058 aaKnown RBP9.26□□□□□ -0.93
SMG5-203ENST00000473643 IFI35P80217 286 aaPredicted RBP9.26□□□□□ -0.93
SMG5-203ENST00000473643 LMNB2Q03252 620 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 KDSRQ06136 332 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 WASHC5Q12768 1159 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 RFTN1Q14699 578 aaPredicted RBP9.26□□□□□ -0.93
SMG5-203ENST00000473643 LPAL2Q16609 132 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 FUT11Q495W5 492 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 EOGTQ5NDL2 527 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 MBLAC2Q68D91 279 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 RETSATQ6NUM9 610 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 TTC27Q6P3X3 843 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 DARS2Q6PI48 645 aaKnown RBP9.26□□□□□ -0.93
SMG5-203ENST00000473643 CCDC137Q6PK04 289 aaKnown RBP9.26□□□□□ -0.93
SMG5-203ENST00000473643 ARHGAP36Q6ZRI8 547 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 CEP68Q76N32 757 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 METTL3Q86U44 580 aaKnown RBP9.26□□□□□ -0.93
SMG5-203ENST00000473643 CTAGE6Q86UF2 777 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 KBTBD6Q86V97 674 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 CTAGE4Q8IX94 777 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 MMGT1Q8N4V1 131 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 ATPAF2Q8N5M1 289 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 TXNDC5Q8NBS9 432 aaKnown RBP9.26□□□□□ -0.93
SMG5-203ENST00000473643 CCNYQ8ND76 341 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 TSTD1Q8NFU3 115 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 HTR3CQ8WXA8 447 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 VAT1Q99536 393 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 IL12RB2Q99665 862 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 FAM118BQ9BPY3 351 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 PARD6AQ9NPB6 346 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 ELOVL2Q9NXB9 296 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 AMACRQ9UHK6 382 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 VPS51Q9UID3 782 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 ZNF148Q9UQR1 794 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 HS3ST2Q9Y278 367 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 NEU2Q9Y3R4 380 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 ATG2BQ96BY7 2078 aa9.26□□□□□ -0.93
SMG5-203ENST00000473643 A0A1W2PQF6 199 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 CBX4O00257 560 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 SNAP91O60641 907 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 GCATO75600 419 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 ALDH1A2O94788 518 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 ATP5BP06576 529 aaKnown RBP9.25□□□□□ -0.93
SMG5-203ENST00000473643 DLDP09622 509 aaKnown RBP9.25□□□□□ -0.93
SMG5-203ENST00000473643 CCNB1P14635 433 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 VAV1P15498 845 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 GLDCP23378 1020 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 PTGIRP43119 386 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 ID4P47928 161 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 KCNJ1P48048 391 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 RENBPP51606 427 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 CLCN6P51797 869 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 ECT2LQ008S8 904 aa9.25□□□□□ -0.93
SMG5-203ENST00000473643 SPEM2Q0P670 501 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms