RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 KRTAP1-1Q07627 177 aa4.92□□□□□ -1.62
CNOT4-209ENST00000473470 GALNT3Q14435 633 aa4.92□□□□□ -1.62
CNOT4-209ENST00000473470 KIAA1755Q5JYT7 1200 aa4.92□□□□□ -1.62
CNOT4-209ENST00000473470 MANEAQ5SRI9 462 aa4.92□□□□□ -1.62
CNOT4-209ENST00000473470 C6orf10Q5SRN2 563 aa4.92□□□□□ -1.62
CNOT4-209ENST00000473470 C10orf76Q5T2E6 689 aa4.92□□□□□ -1.62
CNOT4-209ENST00000473470 DAB2IPQ5VWQ8 1189 aa4.92□□□□□ -1.62
CNOT4-209ENST00000473470 CCDC70Q6NSX1 233 aa4.92□□□□□ -1.62
CNOT4-209ENST00000473470 MMS22LQ6ZRQ5 1243 aa4.92□□□□□ -1.62
CNOT4-209ENST00000473470 IRF2BP2Q7Z5L9 587 aa4.92□□□□□ -1.62
CNOT4-209ENST00000473470 TCP11L2Q8N4U5 519 aa4.92□□□□□ -1.62
CNOT4-209ENST00000473470 ARL14EPQ8N8R7 260 aaPredicted RBP4.92□□□□□ -1.62
CNOT4-209ENST00000473470 OR6Y1Q8NGX8 325 aa4.92□□□□□ -1.62
CNOT4-209ENST00000473470 ZBTB9Q96C00 473 aa4.92□□□□□ -1.62
CNOT4-209ENST00000473470 ZNF347Q96SE7 839 aa4.92□□□□□ -1.62
CNOT4-209ENST00000473470 PYM1Q9BRP8 204 aaKnown RBP4.92□□□□□ -1.62
CNOT4-209ENST00000473470 SEPSECSQ9HD40 501 aaKnown RBP4.92□□□□□ -1.62
CNOT4-209ENST00000473470 RASSF1Q9NS23 344 aa4.92□□□□□ -1.62
CNOT4-209ENST00000473470 ZBTB40Q9NUA8 1239 aa4.92□□□□□ -1.62
CNOT4-209ENST00000473470 C9orf78Q9NZ63 289 aaPredicted RBP4.92□□□□□ -1.62
CNOT4-209ENST00000473470 ANAPC4Q9UJX5 808 aa4.92□□□□□ -1.62
CNOT4-209ENST00000473470 FEM1BQ9UK73 627 aa4.92□□□□□ -1.62
CNOT4-209ENST00000473470 PCDHA12Q9UN75 941 aa4.92□□□□□ -1.62
CNOT4-209ENST00000473470 SQORQ9Y6N5 450 aa4.92□□□□□ -1.62
CNOT4-209ENST00000473470 PAPPAQ13219 1627 aa4.92□□□□□ -1.62
CNOT4-209ENST00000473470 A0A0C4DFX4 3053 aa4.92□□□□□ -1.62
CNOT4-209ENST00000473470 A0A0G2JK05 382 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 A0A1B0GVC2 190 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 PROB1E7EW31 1015 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 H0Y3Z8 333 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 M0QYT0 321 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 MSI1O43347 362 aaKnown RBP4.91□□□□□ -1.62
CNOT4-209ENST00000473470 SH3BP5O60239 455 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 NFATC1O95644 943 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 ITGB6P18564 788 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 CIITAP33076 1130 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 PAPOLAP51003 745 aaKnown RBP4.91□□□□□ -1.62
CNOT4-209ENST00000473470 FAM3BP58499 235 aaPredicted RBP4.91□□□□□ -1.62
CNOT4-209ENST00000473470 SMTNL2Q2TAL5 461 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 ALG10Q5BKT4 473 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 ALG10BQ5I7T1 473 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 DGAT2L7PQ6IED9 249 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 LRRTM4Q86VH4 590 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 C2CD5Q86YS7 1000 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 FTSJ3Q8IY81 847 aaKnown RBP4.91□□□□□ -1.62
CNOT4-209ENST00000473470 ZNF548Q8NEK5 533 aaPredicted RBP4.91□□□□□ -1.62
CNOT4-209ENST00000473470 HERVK_113Q902F9 699 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 LPAR1Q92633 364 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 ATP2A3Q93084 1043 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 RILPL2Q969X0 211 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 MCRS1Q96EZ8 462 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 TRAPPC9Q96Q05 1148 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 NPAS1Q99742 590 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 MAF1Q9H063 256 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 TAF1DQ9H5J8 278 aaPredicted RBP4.91□□□□□ -1.62
CNOT4-209ENST00000473470 ELAC1Q9H777 363 aaKnown RBP4.91□□□□□ -1.62
CNOT4-209ENST00000473470 FZD3Q9NPG1 666 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 RNF146Q9NTX7 359 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 SLC12A4Q9UP95 1085 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 PARP4Q9UKK3 1724 aaKnown RBP4.91□□□□□ -1.62
CNOT4-209ENST00000473470 N4BP2Q86UW6 1770 aaPredicted RBP4.91□□□□□ -1.62
CNOT4-209ENST00000473470 LRPPRCP42704 1394 aaKnown RBP4.91□□□□□ -1.62
CNOT4-209ENST00000473470 CNTNAP1P78357 1384 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 PLEKHH1Q9ULM0 1364 aa4.91□□□□□ -1.62
CNOT4-209ENST00000473470 CCDC144AA2RUR9 1427 aa4.9□□□□□ -1.62
CNOT4-209ENST00000473470 NAIPQ13075 1403 aa4.9□□□□□ -1.62
CNOT4-209ENST00000473470 SSH2Q76I76 1423 aa4.9□□□□□ -1.62
CNOT4-209ENST00000473470 RRBP1Q9P2E9 1410 aaKnown RBP4.9□□□□□ -1.62
CNOT4-209ENST00000473470 GAGE12JA6NER3 117 aa4.9□□□□□ -1.63
CNOT4-209ENST00000473470 RRN3P2A6NIE6 340 aa4.9□□□□□ -1.63
CNOT4-209ENST00000473470 HNRNPRO43390 633 aaKnown RBP4.9□□□□□ -1.63
CNOT4-209ENST00000473470 KAT7O95251 611 aa4.9□□□□□ -1.63
CNOT4-209ENST00000473470 SERPINA4P29622 427 aa4.9□□□□□ -1.63
CNOT4-209ENST00000473470 RCAN1P53805 252 aa4.9□□□□□ -1.63
CNOT4-209ENST00000473470 ACTR2P61160 394 aa4.9□□□□□ -1.63
CNOT4-209ENST00000473470 SHC2P98077 582 aa4.9□□□□□ -1.63
CNOT4-209ENST00000473470 CUL4BQ13620 913 aa4.9□□□□□ -1.63
CNOT4-209ENST00000473470 RPS6KA2Q15349 733 aa4.9□□□□□ -1.63
CNOT4-209ENST00000473470 SMAD1Q15797 465 aaKnown RBP4.9□□□□□ -1.63
CNOT4-209ENST00000473470 TAF12Q16514 161 aa4.9□□□□□ -1.63
CNOT4-209ENST00000473470 PRTGQ2VWP7 1150 aa4.9□□□□□ -1.63
CNOT4-209ENST00000473470 ANKRD45Q5TZF3 282 aa4.9□□□□□ -1.63
CNOT4-209ENST00000473470 ANKS1BQ7Z6G8 1248 aa4.9□□□□□ -1.63
CNOT4-209ENST00000473470 KLBQ86Z14 1044 aa4.9□□□□□ -1.63
CNOT4-209ENST00000473470 FAM185AQ8N0U4 392 aa4.9□□□□□ -1.63
CNOT4-209ENST00000473470 PIGSQ96S52 555 aa4.9□□□□□ -1.63
CNOT4-209ENST00000473470 OSBPL5Q9H0X9 879 aaPredicted RBP4.9□□□□□ -1.63
CNOT4-209ENST00000473470 TXNRD2Q9NNW7 524 aa4.9□□□□□ -1.63
CNOT4-209ENST00000473470 BAG5Q9UL15 447 aa4.9□□□□□ -1.63
CNOT4-209ENST00000473470 LAMP3Q9UQV4 416 aa4.9□□□□□ -1.63
CNOT4-209ENST00000473470 VIRMAQ69YN4 1812 aaKnown RBP4.9□□□□□ -1.63
CNOT4-209ENST00000473470 LRRC37A3O60309 1634 aa4.9□□□□□ -1.63
CNOT4-209ENST00000473470 SZT2Q5T011 3432 aa4.9□□□□□ -1.63
CNOT4-209ENST00000473470 A0A0G2JLW4 131 aa4.89□□□□□ -1.63
CNOT4-209ENST00000473470 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.89□□□□□ -1.63
CNOT4-209ENST00000473470 FAM90A8PA6NJQ4 464 aa4.89□□□□□ -1.63
CNOT4-209ENST00000473470 KCNJ18B7U540 433 aa4.89□□□□□ -1.63
CNOT4-209ENST00000473470 ZNF814B7Z6K7 855 aa4.89□□□□□ -1.63
CNOT4-209ENST00000473470 SPTLC2O15270 562 aa4.89□□□□□ -1.63
CNOT4-209ENST00000473470 CCNT1O60563 726 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms