RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 NSMCE3Q96MG7 304 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 CDC6Q99741 560 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 TRIM62Q9BVG3 475 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 TRIM7Q9C029 511 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 TCEAL2Q9H3H9 227 aaPredicted RBP8.25□□□□□ -1.09
USP48-207ENST00000471752 CCDC86Q9H6F5 360 aaKnown RBP8.25□□□□□ -1.09
USP48-207ENST00000471752 GPATCH2LQ9NWQ4 482 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 OR12D3Q9UGF7 316 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 SLC25A13Q9UJS0 675 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 U3KQA8 63 aa8.25□□□□□ -1.09
USP48-207ENST00000471752 ILVBLA1L0T0 632 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 IGLON5A6NGN9 336 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 TLX3O43711 291 aaPredicted RBP8.24□□□□□ -1.09
USP48-207ENST00000471752 LRIG2O94898 1065 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 PAK4O96013 591 aaPredicted RBP8.24□□□□□ -1.09
USP48-207ENST00000471752 PLEKP08567 350 aaPredicted RBP8.24□□□□□ -1.09
USP48-207ENST00000471752 THEGLP0DJG4 465 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 EEF1GP26641 437 aaKnown RBP8.24□□□□□ -1.09
USP48-207ENST00000471752 NNMTP40261 264 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 ABL2P42684 1182 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 RXRGP48443 463 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 ACADVLP49748 655 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 EMP3P54852 163 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 GNA12Q03113 381 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 TARDBPQ13148 414 aaKnown RBP eCLIP8.24□□□□□ -1.09
USP48-207ENST00000471752 CA9Q16790 459 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 CLEC16AQ2KHT3 1053 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 TMEM259Q4ZIN3 620 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 E4F1Q66K89 784 aaPredicted RBP8.24□□□□□ -1.09
USP48-207ENST00000471752 KCTD16Q68DU8 428 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 RWDD4Q6NW29 188 aaKnown RBP8.24□□□□□ -1.09
USP48-207ENST00000471752 ERN2Q76MJ5 926 aaKnown RBP8.24□□□□□ -1.09
USP48-207ENST00000471752 PARS2Q7L3T8 475 aaKnown RBP8.24□□□□□ -1.09
USP48-207ENST00000471752 SETD3Q86TU7 594 aaPredicted RBP8.24□□□□□ -1.09
USP48-207ENST00000471752 PRPF39Q86UA1 669 aaKnown RBP8.24□□□□□ -1.09
USP48-207ENST00000471752 TRIM69Q86WT6 500 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 HORMAD1Q86X24 394 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 ZDHHC17Q8IUH5 632 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 FAM114A1Q8IWE2 563 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 TP53INP2Q8IXH6 220 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 MFSD2AQ8NA29 543 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 TMIEQ8NEW7 156 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 FAM172AQ8WUF8 416 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 ARHGEF2Q92974 986 aaKnown RBP8.24□□□□□ -1.09
USP48-207ENST00000471752 MARVELD3Q96A59 401 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 HAPLN3Q96S86 360 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 KLF6Q99612 283 aaPredicted RBP8.24□□□□□ -1.09
USP48-207ENST00000471752 TM6SF2Q9BZW4 377 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 ATP13A1Q9HD20 1204 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 GDF3Q9NR23 364 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 FTSJ1Q9UET6 329 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 RAI2Q9Y5P3 530 aa8.24□□□□□ -1.09
USP48-207ENST00000471752 PTPRQQ9UMZ3 2332 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 ZNF462Q96JM2 2506 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 A0A1W2PNU3 283 aaPredicted RBP8.23□□□□□ -1.09
USP48-207ENST00000471752 PMS2P1A4D2B8 440 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 TMEM8BA6NDV4 472 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 C16orf96A6NNT2 1141 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 FFAR2O15552 330 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 PCDH8O95206 1070 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 LSM8O95777 96 aaKnown RBP8.23□□□□□ -1.09
USP48-207ENST00000471752 F9P00740 461 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 PRKCGP05129 697 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 DGKAP23743 735 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 RDXP35241 583 aaKnown RBP8.23□□□□□ -1.09
USP48-207ENST00000471752 SCNN1AP37088 669 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 SERPINH1P50454 418 aaKnown RBP8.23□□□□□ -1.09
USP48-207ENST00000471752 CCNHP51946 323 aaPredicted RBP8.23□□□□□ -1.09
USP48-207ENST00000471752 KRT83P78385 493 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 SFSWAPQ12872 951 aaKnown RBP8.23□□□□□ -1.09
USP48-207ENST00000471752 COL9A2Q14055 689 aaPredicted RBP8.23□□□□□ -1.09
USP48-207ENST00000471752 FZD2Q14332 565 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 STAT4Q14765 748 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 TCEA2Q15560 299 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 PROX2Q3B8N5 592 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 SOWAHCQ53LP3 525 aaPredicted RBP8.23□□□□□ -1.09
USP48-207ENST00000471752 CARD16Q5EG05 197 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 FAM182AQ5T1J6 154 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 FAM46CQ5VWP2 391 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 LRRC31Q6UY01 552 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 Q6ZSR6 202 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 TMC6Q7Z403 805 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 IRF2BP2Q7Z5L9 587 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 DCAF4L2Q8NA75 395 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 KLHDC7BQ96G42 594 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 LRIG1Q96JA1 1093 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 SYT11Q9BT88 431 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 C2orf49Q9BVC5 232 aaPredicted RBP8.23□□□□□ -1.09
USP48-207ENST00000471752 CALN1Q9BXU9 219 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 HDAC8Q9BY41 377 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 ZYG11BQ9C0D3 744 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 OSBPL2Q9H1P3 480 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 ZDHHC6Q9H6R6 413 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 MBNL1Q9NR56 388 aaKnown RBP8.23□□□□□ -1.09
USP48-207ENST00000471752 RRN3Q9NYV6 651 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 ADAM22Q9P0K1 906 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 HECAQ9UBI9 543 aaPredicted RBP8.23□□□□□ -1.09
USP48-207ENST00000471752 IL36AQ9UHA7 158 aa8.23□□□□□ -1.09
USP48-207ENST00000471752 LIMA1Q9UHB6 759 aaKnown RBP8.23□□□□□ -1.09
USP48-207ENST00000471752 STAP1Q9ULZ2 295 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms