RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 PTGR2Q8N8N7 351 aaPredicted RBP13.11□□□□□ -0.31
PCCB-210ENST00000471595 CDCA5Q96FF9 252 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 NDEL1Q9GZM8 345 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 LEF1Q9UJU2 399 aaPredicted RBP13.11□□□□□ -0.31
PCCB-210ENST00000471595 YDJCA8MPS7 323 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 PRR23D1E9PI22 279 aaPredicted RBP13.11□□□□□ -0.31
PCCB-210ENST00000471595 TRIM24O15164 1050 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 RECQL5O94762 991 aaPredicted RBP13.11□□□□□ -0.31
PCCB-210ENST00000471595 PRR23D2P0DMB1 279 aaPredicted RBP13.11□□□□□ -0.31
PCCB-210ENST00000471595 SMIM10L2AP0DMW4 78 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 SMIM10L2BP0DMW5 78 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 PSEN1P49768 467 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 NR1H2P55055 460 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 NEDD8Q15843 81 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 ZNF276Q8N554 614 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 CPT1BQ92523 772 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 GRIP2Q9C0E4 1043 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 STARD7Q9NQZ5 370 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 ARL8BQ9NVJ2 186 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 USE1Q9NZ43 259 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 UXTQ9UBK9 157 aaPredicted RBP13.11□□□□□ -0.31
PCCB-210ENST00000471595 COMMD3-BMI1R4GMX3 469 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 MANSC4A6NHS7 340 aaPredicted RBP13.11□□□□□ -0.31
PCCB-210ENST00000471595 GSC2O15499 205 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 CILPO75339 1184 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 RPL5P46777 297 aaKnown RBP13.11□□□□□ -0.31
PCCB-210ENST00000471595 TNK2Q07912 1038 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 AFTPHQ6ULP2 937 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 ECHDC2Q86YB7 292 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 BSNDQ8WZ55 320 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 ZYG11BQ9C0D3 744 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 PAIP1Q9H074 479 aaKnown RBP13.11□□□□□ -0.31
PCCB-210ENST00000471595 SEMA4BQ9NPR2 832 aaPredicted RBP13.11□□□□□ -0.31
PCCB-210ENST00000471595 MIEF1Q9NQG6 463 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 DCDC2CA8MYV0 355 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 IMPDH2P12268 514 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 ITGB6P18564 788 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 GSTT1P30711 240 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 GRK3P35626 688 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 TRIP4Q15650 581 aaPredicted RBP13.11□□□□□ -0.31
PCCB-210ENST00000471595 FAM187BQ17R55 369 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 P2RY11Q96G91 374 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 TMEM216Q9P0N5 145 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 MCM8Q9UJA3 840 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 SPACA6W5XKT8 324 aa13.11□□□□□ -0.31
PCCB-210ENST00000471595 PARP4Q9UKK3 1724 aaKnown RBP13.11□□□□□ -0.31
PCCB-210ENST00000471595 A0A1B0GW55 424 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 TTLL13PA6NNM8 815 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 DUX4L2P0CJ85 424 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 DUX4L3P0CJ86 424 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 DUX4L4P0CJ87 422 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 DUX4L5P0CJ88 424 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 DUX4L6P0CJ89 424 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 DUX4L7P0CJ90 424 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 TFEBP19484 476 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 BCL2L1Q07817 233 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 C16orf72Q14CZ0 275 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 RNASEH2BQ5TBB1 312 aaKnown RBP13.1□□□□□ -0.31
PCCB-210ENST00000471595 C12orf29Q8N999 325 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 FAM13CQ8NE31 585 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 POP5Q969H6 163 aaKnown RBP13.1□□□□□ -0.31
PCCB-210ENST00000471595 TMEM159Q96B96 161 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 CPXM1Q96SM3 734 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 DUX4Q9UBX2 424 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 SATB2Q9UPW6 733 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 INVSQ9Y283 1065 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 HBS1LQ9Y450 684 aaKnown RBP13.1□□□□□ -0.31
PCCB-210ENST00000471595 FAM220BPB1ANY3 271 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 POU1F1P28069 291 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 ARL2P36404 184 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 POLD2P49005 469 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 DCTN2Q13561 401 aaKnown RBP13.1□□□□□ -0.31
PCCB-210ENST00000471595 NRF1Q16656 503 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 DEFB132Q7Z7B7 95 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 PGLYRP2Q96PD5 576 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 MECRQ9BV79 373 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 CAB39Q9Y376 341 aaPredicted RBP13.1□□□□□ -0.31
PCCB-210ENST00000471595 MED1Q15648 1581 aaPredicted RBP13.1□□□□□ -0.31
PCCB-210ENST00000471595 KRT87PA6NCN2 255 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 LRCH4O75427 683 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 SLC1A5Q15758 541 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 DGUOKQ16854 277 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 C8orf59Q8N0T1 100 aaPredicted RBP13.1□□□□□ -0.31
PCCB-210ENST00000471595 TSPAN14Q8NG11 270 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 RAD21L1Q9H4I0 556 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 MAPRE3Q9UPY8 281 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 SLIT2O94813 1529 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 CHRNB2P17787 502 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 PPP2R1BP30154 601 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 GRIA3P42263 894 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 SCNN1GP51170 649 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 ALDH6A1Q02252 535 aaKnown RBP13.1□□□□□ -0.31
PCCB-210ENST00000471595 TXNDC11Q6PKC3 985 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 USP50Q70EL3 339 aaPredicted RBP13.1□□□□□ -0.31
PCCB-210ENST00000471595 TTC7BQ86TV6 843 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 SLC44A2Q8IWA5 706 aaPredicted RBP13.1□□□□□ -0.31
PCCB-210ENST00000471595 SPPL2AQ8TCT8 520 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 TRMOQ9BU70 441 aa13.1□□□□□ -0.31
PCCB-210ENST00000471595 ZCCHC2Q9C0B9 1178 aaKnown RBP13.1□□□□□ -0.31
PCCB-210ENST00000471595 RHOJQ9H4E5 214 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms