RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 SDK1Q7Z5N4 2213 aa15.55■□□□□ 0.08
SDC3-203ENST00000471567 C3orf70A6NLC5 250 aaPredicted RBP15.54■□□□□ 0.08
SDC3-203ENST00000471567 SLC7A4O43246 635 aa15.54■□□□□ 0.08
SDC3-203ENST00000471567 NRDCO43847 1150 aa15.54■□□□□ 0.08
SDC3-203ENST00000471567 RNASEH2AO75792 299 aaKnown RBP15.54■□□□□ 0.08
SDC3-203ENST00000471567 POP4O95707 220 aaKnown RBP15.54■□□□□ 0.08
SDC3-203ENST00000471567 KRT1P04264 644 aa15.54■□□□□ 0.08
SDC3-203ENST00000471567 CTSLP07711 333 aa15.54■□□□□ 0.08
SDC3-203ENST00000471567 ACSL1P33121 698 aa15.54■□□□□ 0.08
SDC3-203ENST00000471567 DRD3P35462 400 aa15.54■□□□□ 0.08
SDC3-203ENST00000471567 PTGER3P43115 390 aa15.54■□□□□ 0.08
SDC3-203ENST00000471567 CCNHP51946 323 aaPredicted RBP15.54■□□□□ 0.08
SDC3-203ENST00000471567 RHOAP61586 193 aa15.54■□□□□ 0.08
SDC3-203ENST00000471567 CYTH1Q15438 398 aa15.54■□□□□ 0.08
SDC3-203ENST00000471567 MYLK3Q32MK0 819 aa15.54■□□□□ 0.08
SDC3-203ENST00000471567 SYCP2LQ5T4T6 812 aa15.54■□□□□ 0.08
SDC3-203ENST00000471567 TMCO4Q5TGY1 634 aa15.54■□□□□ 0.08
SDC3-203ENST00000471567 NCBP2-AS2Q69YL0 99 aa15.54■□□□□ 0.08
SDC3-203ENST00000471567 CYP2U1Q7Z449 544 aa15.54■□□□□ 0.08
SDC3-203ENST00000471567 HDDC3Q8N4P3 179 aa15.54■□□□□ 0.08
SDC3-203ENST00000471567 PQLC3Q8N755 202 aa15.54■□□□□ 0.08
SDC3-203ENST00000471567 KIAA1524Q8TCG1 905 aa15.54■□□□□ 0.08
SDC3-203ENST00000471567 GDAP1L1Q96MZ0 367 aa15.54■□□□□ 0.08
SDC3-203ENST00000471567 TM6SF2Q9BZW4 377 aa15.54■□□□□ 0.08
SDC3-203ENST00000471567 ARRDC1-AS1Q9H2J1 176 aa15.54■□□□□ 0.08
SDC3-203ENST00000471567 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.54■□□□□ 0.08
SDC3-203ENST00000471567 NYNRINQ9P2P1 1898 aaKnown RBP15.54■□□□□ 0.08
SDC3-203ENST00000471567 VPS13AQ96RL7 3174 aa15.54■□□□□ 0.08
SDC3-203ENST00000471567 EP300Q09472 2414 aaPredicted RBP15.54■□□□□ 0.08
SDC3-203ENST00000471567 METTL12A8MUP2 240 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 FOXD2O60548 495 aaPredicted RBP15.53■□□□□ 0.08
SDC3-203ENST00000471567 LEFTY1O75610 366 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 PALMO75781 387 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 SEMA4FO95754 770 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 IGSF6O95976 241 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 TNNT1P13805 278 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 ZFXP17010 805 aaPredicted RBP15.53■□□□□ 0.08
SDC3-203ENST00000471567 HOXD12P35452 270 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 MPLP40238 635 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 CSNK1DP48730 415 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 CREB5Q02930 508 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 RAD51Q06609 339 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 ARSIQ5FYB1 569 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 WDR45BQ5MNZ6 344 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 PLA2G2CQ5R387 149 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 ARHGAP36Q6ZRI8 547 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 SYT12Q8IV01 421 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 SLC41A1Q8IVJ1 513 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 TP53INP2Q8IXH6 220 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 KATNAL2Q8IYT4 538 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 RYBPQ8N488 228 aaPredicted RBP15.53■□□□□ 0.08
SDC3-203ENST00000471567 DCLK2Q8N568 766 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 ATPAF2Q8N5M1 289 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 RNF10Q8N5U6 811 aaKnown RBP15.53■□□□□ 0.08
SDC3-203ENST00000471567 NETO2Q8NC67 525 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 PPP1R16AQ96I34 528 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 HSPA12BQ96MM6 686 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 MAK16Q9BXY0 300 aaKnown RBP15.53■□□□□ 0.08
SDC3-203ENST00000471567 TSGA10Q9BZW7 698 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 KDM4CQ9H3R0 1056 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 GOLPH3Q9H4A6 298 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 DYRK4Q9NR20 520 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 VPS45Q9NRW7 570 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 LHX3Q9UBR4 397 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 SERGEFQ9UGK8 458 aa15.53■□□□□ 0.08
SDC3-203ENST00000471567 TPX2Q9ULW0 747 aaKnown RBP15.53■□□□□ 0.08
SDC3-203ENST00000471567 PTPRZ1P23471 2315 aaPredicted RBP15.52■□□□□ 0.08
SDC3-203ENST00000471567 LRRC72A6NJI9 287 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 KPNA3O00505 521 aaPredicted RBP15.52■□□□□ 0.08
SDC3-203ENST00000471567 MFSD11O43934 449 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 MAFKO60675 156 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 ZRANB2O95218 330 aaKnown RBP eCLIP15.52■□□□□ 0.08
SDC3-203ENST00000471567 ZNF806P0C7X5 589 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 MX2P20592 715 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 TGM1P22735 817 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 RENBPP51606 427 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 NSUN2Q08J23 767 aaKnown RBP eCLIP15.52■□□□□ 0.08
SDC3-203ENST00000471567 SPEM2Q0P670 501 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 GALNT2Q10471 571 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 CNTN1Q12860 1018 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 GRM3Q14832 879 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 CSRP2Q16527 193 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 TAZQ16635 292 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 PEAR1Q5VY43 1037 aaPredicted RBP15.52■□□□□ 0.08
SDC3-203ENST00000471567 SLC9A4Q6AI14 798 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.52■□□□□ 0.08
SDC3-203ENST00000471567 ARMCX6Q7L4S7 300 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 RCOR2Q8IZ40 523 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 SYCE1Q8N0S2 351 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 DEFB119Q8N690 84 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 LRRC57Q8N9N7 239 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 OR2T34Q8NGX1 318 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 GRIN3AQ8TCU5 1115 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.52■□□□□ 0.08
SDC3-203ENST00000471567 NSMCE1Q8WV22 266 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 DNASE2BQ8WZ79 361 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 PIGKQ92643 395 aa15.52■□□□□ 0.08
SDC3-203ENST00000471567 ANP32BQ92688 251 aaKnown RBP15.52■□□□□ 0.08
SDC3-203ENST00000471567 RNF25Q96BH1 459 aaPredicted RBP15.52■□□□□ 0.08
SDC3-203ENST00000471567 OSBPL1AQ9BXW6 950 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms