RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 SPINT1O43278 529 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 MTSS1O43312 755 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 ATP9BO43861 1147 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 STX10O60499 249 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 FBXO21O94952 628 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 RHOCP08134 193 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 KRT7P08729 469 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 SRCP12931 536 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 RPL13P26373 211 aaKnown RBP7.02□□□□□ -1.29
HDAC1-204ENST00000471488 ATP1A2P50993 1020 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 IRAK1P51617 712 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 OXCT1P55809 520 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 PPARDQ03181 441 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 EIF2B5Q13144 721 aaKnown RBP7.02□□□□□ -1.29
HDAC1-204ENST00000471488 NME3Q13232 169 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 ADAM9Q13443 819 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 BIRC2Q13490 618 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 MORC3Q14149 939 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 FGL2Q14314 439 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 AMZ1Q400G9 498 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 MAP9Q49MG5 647 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 LRRC73Q5JTD7 316 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 SYPL2Q5VXT5 272 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 CNNM4Q6P4Q7 775 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 ARL10Q8N8L6 244 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 LINC00301Q8NCQ3 95 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 OR52K2Q8NGK3 314 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 OR6K2Q8NGY2 324 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 KCTD13Q8WZ19 329 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 IRGQQ8WZA9 623 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 CCDC47Q96A33 483 aaKnown RBP7.02□□□□□ -1.29
HDAC1-204ENST00000471488 BTN2A3PQ96KV6 586 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 PSMG3-AS1Q96PY0 264 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 CMKLR1Q99788 373 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 FEM1AQ9BSK4 669 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 FUCA2Q9BTY2 467 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 BOCQ9BWV1 1114 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 LRRN3Q9H3W5 708 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 SUDS3Q9H7L9 328 aaPredicted RBP7.02□□□□□ -1.29
HDAC1-204ENST00000471488 UPF2Q9HAU5 1272 aaKnown RBP7.02□□□□□ -1.29
HDAC1-204ENST00000471488 AKAP7Q9P0M2 348 aaPredicted RBP7.02□□□□□ -1.29
HDAC1-204ENST00000471488 ITM2BQ9Y287 266 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 DAAM1Q9Y4D1 1078 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 HS3ST3A1Q9Y663 406 aa7.02□□□□□ -1.29
HDAC1-204ENST00000471488 FLNCQ14315 2725 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 NBPF19A0A087WUL8 3843 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 B4DGG1 531 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 C10orf142B7Z368 130 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 LMO7DNF2Z398 122 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 STMND1H3BQB6 276 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 NTN3O00634 580 aaPredicted RBP7.01□□□□□ -1.29
HDAC1-204ENST00000471488 TPP1O14773 563 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 SMAD6O43541 496 aaKnown RBP7.01□□□□□ -1.29
HDAC1-204ENST00000471488 VPS4BO75351 444 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 GRAP2O75791 330 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 GABBR2O75899 941 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 TRUB2O95900 331 aaKnown RBP7.01□□□□□ -1.29
HDAC1-204ENST00000471488 EPB41P11171 864 aaKnown RBP7.01□□□□□ -1.29
HDAC1-204ENST00000471488 ADRB3P13945 408 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 LIFP15018 202 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 MLLT10P55197 1068 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 PITX1P78337 314 aaPredicted RBP7.01□□□□□ -1.29
HDAC1-204ENST00000471488 ARHGEF7Q14155 803 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 TMEM259Q4ZIN3 620 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 TTC39BQ5VTQ0 682 aaPredicted RBP7.01□□□□□ -1.29
HDAC1-204ENST00000471488 CXorf57Q6NSI4 855 aaKnown RBP7.01□□□□□ -1.29
HDAC1-204ENST00000471488 KIAA1161Q6NSJ0 714 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 FBXL22Q6P050 247 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 C16orf46Q6P387 395 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 C22orf39Q6P5X5 142 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 DPY19L3Q6ZPD9 716 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 TFAP2DQ7Z6R9 452 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 CCNJLQ8IV13 435 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 NRSN1Q8IZ57 195 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 RCBTB1Q8NDN9 531 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 TMIEQ8NEW7 156 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 OR2A12Q8NGT7 310 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 FAM174AQ8TBP5 190 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 TFAP2BQ92481 460 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 TSACCQ96A04 125 aaPredicted RBP7.01□□□□□ -1.29
HDAC1-204ENST00000471488 FAM131CQ96AQ9 280 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 WRAP53Q9BUR4 548 aaKnown RBP7.01□□□□□ -1.29
HDAC1-204ENST00000471488 C2orf49Q9BVC5 232 aaPredicted RBP7.01□□□□□ -1.29
HDAC1-204ENST00000471488 TM6SF2Q9BZW4 377 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 CLPBQ9H078 707 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 ADNPQ9H2P0 1102 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 ZSCAN16Q9H4T2 348 aaPredicted RBP7.01□□□□□ -1.29
HDAC1-204ENST00000471488 RDH14Q9HBH5 336 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 DDIT4Q9NX09 232 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 MAP10Q9P2G4 905 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 MOSPD1Q9UJG1 213 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 ANAPC2Q9UJX6 822 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 VPS4AQ9UN37 437 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 RNF215Q9Y6U7 377 aa7.01□□□□□ -1.29
HDAC1-204ENST00000471488 SPTAN1Q13813 2472 aaKnown RBP7□□□□□ -1.29
HDAC1-204ENST00000471488 A0A1W2PQM1 296 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 FAM170AA1A519 330 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 C9orf172C9J069 976 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 KLRC4O43908 158 aa7□□□□□ -1.29
HDAC1-204ENST00000471488 LZTS3O60299 673 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms