RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 PRSS57Q6UWY2 283 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 C16orf82Q7Z2V1 217 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 ZDHHC23Q8IYP9 409 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 SPICE1Q8N0Z3 855 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 CLIP4Q8N3C7 705 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 FSIP1Q8NA03 581 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 NEXN-AS1Q8NBZ9 246 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 VPS37AQ8NEZ2 397 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 LMO3Q8TAP4 145 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 TMEM163Q8TC26 289 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 OTUD7AQ8TE49 926 aaPredicted RBP1.54□□□□□ -2.16
UBXN4-207ENST00000471246 FAM216AQ8WUB2 273 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 TMED6Q8WW62 240 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 GOLGA1Q92805 767 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 ATOH1Q92858 354 aaPredicted RBP1.54□□□□□ -2.16
UBXN4-207ENST00000471246 TMEM18Q96B42 140 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 KTI12Q96EK9 354 aaPredicted RBP1.54□□□□□ -2.16
UBXN4-207ENST00000471246 LTV1Q96GA3 475 aaPredicted RBP1.54□□□□□ -2.16
UBXN4-207ENST00000471246 GFM1Q96RP9 751 aaKnown RBP1.54□□□□□ -2.16
UBXN4-207ENST00000471246 DDX23Q9BUQ8 820 aaKnown RBP1.54□□□□□ -2.16
UBXN4-207ENST00000471246 HERC2P3Q9BVR0 1158 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 XRN2Q9H0D6 950 aaKnown RBP eCLIP1.54□□□□□ -2.16
UBXN4-207ENST00000471246 CXorf56Q9H5V9 222 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 RMI1Q9H9A7 625 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 ZNF556Q9HAH1 456 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 PLEKHA2Q9HB19 425 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 PLCB1Q9NQ66 1216 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 TXLNGQ9NUQ3 528 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 THAP1Q9NVV9 213 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 GRHPRQ9UBQ7 328 aa1.54□□□□□ -2.16
UBXN4-207ENST00000471246 A0A087WYN8 130 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 IGHV4-28A0A0C4DH34 117 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 TARSL2A2RTX5 802 aaKnown RBP1.53□□□□□ -2.16
UBXN4-207ENST00000471246 OR6C68A6NDL8 312 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 KDM4EB2RXH2 506 aaPredicted RBP1.53□□□□□ -2.16
UBXN4-207ENST00000471246 BTBD18B2RXH4 712 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 E7EVH7 732 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 EYA2O00167 538 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 IPO5O00410 1097 aaKnown RBP1.53□□□□□ -2.16
UBXN4-207ENST00000471246 ASAP2O43150 1006 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 SEPT4O43236 478 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 ITM2AO43736 263 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 STRNO43815 780 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 HBP1O60381 514 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 KCNJ13O60928 360 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 KRT38O76015 456 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 ZNF432O94892 652 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 CBX6O95503 412 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 METTL18O95568 372 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 TFRCP02786 760 aaKnown RBP1.53□□□□□ -2.16
UBXN4-207ENST00000471246 CKMT1AP12532 417 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 ENO3P13929 434 aaPredicted RBP1.53□□□□□ -2.16
UBXN4-207ENST00000471246 ARSAP15289 507 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 ZNF12P17014 697 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 NAGAP17050 411 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 CST5P28325 142 aaPredicted RBP1.53□□□□□ -2.16
UBXN4-207ENST00000471246 C21orf33P30042 268 aaPredicted RBP1.53□□□□□ -2.16
UBXN4-207ENST00000471246 DCTDP32321 178 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 GJC1P36383 396 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 SKIV2L2P42285 1042 aaKnown RBP1.53□□□□□ -2.16
UBXN4-207ENST00000471246 DPP6P42658 865 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 PTPN9P43378 593 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 MTNR1AP48039 350 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 RBM5P52756 815 aaKnown RBP eCLIP1.53□□□□□ -2.16
UBXN4-207ENST00000471246 MVDP53602 400 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 ERVFC1-1P60608 527 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 SEC61A1P61619 476 aaKnown RBP1.53□□□□□ -2.16
UBXN4-207ENST00000471246 BNC1Q01954 994 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 TRAF2Q12933 501 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 COASYQ13057 564 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 TRAF3Q13114 568 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 HDAC1Q13547 482 aaPredicted RBP1.53□□□□□ -2.16
UBXN4-207ENST00000471246 UBE4AQ14139 1066 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 TRIM14Q14142 442 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 CTTNQ14247 550 aaKnown RBP1.53□□□□□ -2.16
UBXN4-207ENST00000471246 MYBPC2Q14324 1141 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 IL13RA2Q14627 380 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 RPE65Q16518 533 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 ME3Q16798 604 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 TUBB8Q3ZCM7 444 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 CCDC38Q502W7 563 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 FAM76BQ5HYJ3 339 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 ZNF484Q5JVG2 852 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 TMEM268Q5VZI3 342 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 JMJD6Q6NYC1 403 aaPredicted RBP1.53□□□□□ -2.16
UBXN4-207ENST00000471246 H1FNTQ75WM6 255 aaPredicted RBP1.53□□□□□ -2.16
UBXN4-207ENST00000471246 MON1BQ7L1V2 547 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 ARMC9Q7Z3E5 817 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 PATL1Q86TB9 770 aaKnown RBP1.53□□□□□ -2.16
UBXN4-207ENST00000471246 CUZD1Q86UP6 607 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 MYLK4Q86YV6 388 aaPredicted RBP1.53□□□□□ -2.16
UBXN4-207ENST00000471246 TMC8Q8IU68 726 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 OR6Y1Q8NGX8 325 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 GPT2Q8TD30 523 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 CSGALNACT1Q8TDX6 532 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 THAP4Q8WY91 577 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 RTP4Q96DX8 246 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 TXNDC15Q96J42 360 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 SLITRK1Q96PX8 696 aa1.53□□□□□ -2.16
UBXN4-207ENST00000471246 FIZ1Q96SL8 496 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms