RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 ZDHHC17Q8IUH5 632 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 REXO1L1PQ8IX06 675 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 RHOT2Q8IXI1 618 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 LGI2Q8N0V4 545 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 FRS2Q8WU20 508 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 FAM149B1Q96BN6 582 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 ZNF653Q96CK0 615 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 C18orf8Q96DM3 657 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 CALR3Q96L12 384 aaKnown RBP9.3□□□□□ -0.92
SF3A1-206ENST00000471037 RPL10LQ96L21 214 aaKnown RBP9.3□□□□□ -0.92
SF3A1-206ENST00000471037 CPXM1Q96SM3 734 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 C11orf70Q9BRQ4 267 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 SLC4A5Q9BY07 1137 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 PACSIN1Q9BY11 444 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 THAP2Q9H0W7 228 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 ST7Q9NRC1 585 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 TJP2Q9UDY2 1190 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 CYTH4Q9UIA0 394 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 AK5Q9Y6K8 562 aa9.3□□□□□ -0.92
SF3A1-206ENST00000471037 TBC1D3DA0A087WVF3 549 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 TBC1D3IA0A087WXS9 549 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 TBC1D3EA0A087X179 549 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 TBC1D3KA0A087X1G2 549 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 A0A1B0GVM2 712 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 RCCD1A6NED2 376 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 TBC1D3FA6NER0 549 aaPredicted RBP9.29□□□□□ -0.92
SF3A1-206ENST00000471037 TCAF2A6NFQ2 919 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 KCNU1A8MYU2 1149 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 TBC1D3LB9A6J9 549 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 F5H5T6 163 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 CAPN9O14815 690 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 ALOX15BO15296 676 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 C1QL1O75973 258 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 TRUB2O95900 331 aaKnown RBP9.29□□□□□ -0.92
SF3A1-206ENST00000471037 CYP1A2P05177 515 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 TBC1D3HP0C7X1 549 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 RRM1P23921 792 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 SCNN1AP37088 669 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 ARHGAP25P42331 645 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 OXCT1P55809 520 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 C19orf57Q0VDD7 668 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 TCEAL1Q15170 157 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 IFI16Q16666 785 aaKnown RBP9.29□□□□□ -0.92
SF3A1-206ENST00000471037 PROX2Q3B8N5 592 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 ZC3H12AQ5D1E8 599 aaKnown RBP9.29□□□□□ -0.92
SF3A1-206ENST00000471037 TTC39BQ5VTQ0 682 aaPredicted RBP9.29□□□□□ -0.92
SF3A1-206ENST00000471037 AGBL4Q5VU57 503 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 FAM46CQ5VWP2 391 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 TBC1D3GQ6DHY5 549 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 TBC1D3CQ6IPX1 549 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.29□□□□□ -0.92
SF3A1-206ENST00000471037 DSG4Q86SJ6 1040 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 PRPF39Q86UA1 669 aaKnown RBP9.29□□□□□ -0.92
SF3A1-206ENST00000471037 TBC1D3Q8IZP1 549 aaPredicted RBP9.29□□□□□ -0.92
SF3A1-206ENST00000471037 RNF10Q8N5U6 811 aaKnown RBP9.29□□□□□ -0.92
SF3A1-206ENST00000471037 DCBLD1Q8N8Z6 715 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 C3orf20Q8ND61 904 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 OR8D1Q8WZ84 308 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 SLC39A7Q92504 469 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 FGF11Q92914 225 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 FCRL3Q96P31 734 aaPredicted RBP9.29□□□□□ -0.92
SF3A1-206ENST00000471037 PRMT1Q99873 361 aaKnown RBP9.29□□□□□ -0.92
SF3A1-206ENST00000471037 LACRTQ9GZZ8 138 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 POPDC2Q9HBU9 364 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 MRPL47Q9HD33 250 aaKnown RBP9.29□□□□□ -0.92
SF3A1-206ENST00000471037 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.29□□□□□ -0.92
SF3A1-206ENST00000471037 TRMT1Q9NXH9 659 aaKnown RBP9.29□□□□□ -0.92
SF3A1-206ENST00000471037 UVRAGQ9P2Y5 699 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 CNOT8Q9UFF9 292 aaKnown RBP9.29□□□□□ -0.92
SF3A1-206ENST00000471037 CLCA2Q9UQC9 943 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 SCINQ9Y6U3 715 aa9.29□□□□□ -0.92
SF3A1-206ENST00000471037 KNTC1P50748 2209 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 HELZ2Q9BYK8 2649 aaKnown RBP9.28□□□□□ -0.92
SF3A1-206ENST00000471037 TEX51A0A1B0GUA7 166 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 USP27XA6NNY8 438 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 ESPNB1AK53 854 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 E5RJQ4 531 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 ATP9BO43861 1147 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 BRINP1O60477 761 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 RNGTTO60942 597 aaKnown RBP9.28□□□□□ -0.92
SF3A1-206ENST00000471037 MTA2O94776 668 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 PRB1P04280 392 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 ERBB2P04626 1255 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 SLC2A3P11169 496 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 VAV1P15498 845 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 PDGFRAP16234 1089 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 GLDCP23378 1020 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 ACTN2P35609 894 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 METAP1P53582 386 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 HADHBP55084 474 aaKnown RBP9.28□□□□□ -0.92
SF3A1-206ENST00000471037 YWHAZP63104 245 aaKnown RBP9.28□□□□□ -0.92
SF3A1-206ENST00000471037 INSM1Q01101 510 aaPredicted RBP9.28□□□□□ -0.92
SF3A1-206ENST00000471037 ZNF211Q13398 564 aaPredicted RBP9.28□□□□□ -0.92
SF3A1-206ENST00000471037 STAT4Q14765 748 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 TBC1D25Q3MII6 688 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 SETMARQ53H47 684 aaPredicted RBP9.28□□□□□ -0.92
SF3A1-206ENST00000471037 PLEKHA7Q6IQ23 1121 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 CXorf57Q6NSI4 855 aaKnown RBP9.28□□□□□ -0.92
SF3A1-206ENST00000471037 DNAJC24Q6P3W2 148 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 XYLT1Q86Y38 959 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms