RNA–Protein interactions for RNA: ENST00000470243.5

SRRM1-208, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-208	ENST00000470243	RTL10	Q7L3V2	364 aa		4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	RSRC2	Q7L4I2	434 aa	Known RBP	4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	MDGA2	Q7Z553	956 aa		4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	CHSY1	Q86X52	802 aa		4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	SCN4B	Q8IWT1	228 aa		4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	C16orf71	Q8IYS4	520 aa	Predicted RBP	4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	ENDOV	Q8N8Q3	282 aa	Known RBP	4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	PNLDC1	Q8NA58	520 aa	Known RBP	4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	LSM14A	Q8ND56	463 aa	Known RBP	4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	ADPRHL1	Q8NDY3	354 aa		4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	ADAMTS18	Q8TE60	1221 aa		4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	FRAT1	Q92837	279 aa	Predicted RBP	4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	CELF1	Q92879	486 aa	Known RBP	4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	ATP2A3	Q93084	1043 aa		4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	ZUFSP	Q96AP4	578 aa		4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	RNFT2	Q96EX2	444 aa		4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	MASTL	Q96GX5	879 aa		4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	SENP7	Q9BQF6	1050 aa		4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	TRIM2	Q9C040	744 aa		4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	PRDM13	Q9H4Q3	707 aa		4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	SYNPO2L	Q9H987	977 aa		4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	SFXN1	Q9H9B4	322 aa		4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	STK26	Q9P289	416 aa		4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	ARPP21	Q9UBL0	812 aa	Predicted RBP	4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	KL	Q9UEF7	1012 aa		4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	SLC25A13	Q9UJS0	675 aa		4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	ISY1	Q9ULR0	285 aa	Known RBP	4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	SLIT3	O75094	1523 aa		4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	USP6	P35125	1406 aa		4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	YTHDC2	Q9H6S0	1430 aa	Known RBP	4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	TRPM7	Q96QT4	1865 aa		4.54	□□□□□ -1.68
SRRM1-208	ENST00000470243	CPD	O75976	1380 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	CNTNAP1	P78357	1384 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	PLEKHG2	Q9H7P9	1386 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	LAMB4	A4D0S4	1761 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	DLEC1	Q9Y238	1755 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	C4B	P0C0L5	1744 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	CCDC196	A0A1B0GTZ2	297 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	POC1B-GALNT4	F8VUJ3	575 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	UBE2Q2L	H0YL09	131 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	C1QL1	O75973	258 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	IFIT1	P09914	478 aa	Known RBP	4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	ARSA	P15289	507 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	PPP2R1A	P30153	589 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	PGM1	P36871	562 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	CLK3	P49761	638 aa	Known RBP	4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	SOX10	P56693	466 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	COL10A1	Q03692	680 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	TMEM119	Q4V9L6	283 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	MTFR2	Q6P444	385 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	DHRS13	Q6UX07	377 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	RHPN2	Q8IUC4	686 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	EXD3	Q8N9H8	876 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	C2CD4C	Q8TF44	421 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	TBC1D22A	Q8WUA7	517 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	ZBTB10	Q96DT7	871 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	GATA5	Q9BWX5	397 aa	Predicted RBP	4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	PAIP1	Q9H074	479 aa	Known RBP	4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	TTYH1	Q9H313	450 aa	Predicted RBP	4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	UNC45A	Q9H3U1	944 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	PANK3	Q9H999	370 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	PKP3	Q9Y446	797 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	DMRT1	Q9Y5R6	373 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	ITGB4	P16144	1822 aa		4.53	□□□□□ -1.68
SRRM1-208	ENST00000470243	LTN1	O94822	1766 aa		4.53	□□□□□ -1.69
SRRM1-208	ENST00000470243	RGPD2	P0DJD1	1756 aa		4.53	□□□□□ -1.69
SRRM1-208	ENST00000470243	POLR3A	O14802	1390 aa	Predicted RBP	4.53	□□□□□ -1.69
SRRM1-208	ENST00000470243	MAP2	P11137	1827 aa	Known RBP	4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	C17orf100	A8MU93	164 aa		4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243		B4E171	279 aa		4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	TMEM232	C9JQI7	657 aa		4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	DSCR3	O14972	297 aa		4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	CHRM5	P08912	532 aa	Predicted RBP	4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	CYP2A6	P11509	494 aa	Predicted RBP	4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	CYP4B1	P13584	511 aa		4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	ST6GAL1	P15907	406 aa		4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	TGM2	P21980	687 aa		4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	ABCD3	P28288	659 aa		4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	PSMC2	P35998	433 aa	Known RBP	4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	TSPAN7	P41732	249 aa		4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	MVD	P53602	400 aa		4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	INHBC	P55103	352 aa		4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	YPEL5	P62699	121 aa		4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	ALKBH1	Q13686	389 aa	Known RBP	4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	MAPRE1	Q15691	268 aa	Known RBP	4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	GPR68	Q15743	365 aa		4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	PFKFB3	Q16875	520 aa	Predicted RBP	4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	PROSER3	Q2NL68	480 aa		4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	ANXA2R	Q3ZCQ2	193 aa		4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	CERKL	Q49MI3	558 aa	Predicted RBP	4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	SH2D4B	Q5SQS7	431 aa		4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	TMEM63B	Q5T3F8	832 aa		4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	UBAP2	Q5T6F2	1119 aa	Known RBP	4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	PRAMEF17	Q5VTA0	474 aa		4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	SUMO4	Q6EEV6	95 aa		4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	SLC30A9	Q6PML9	568 aa		4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	C1orf122	Q6ZSJ8	110 aa		4.52	□□□□□ -1.69
SRRM1-208	ENST00000470243	TMEM200A	Q86VY9	491 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms