RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 SERPINB11Q96P15 392 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 TSGA13Q96PP4 275 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 HAPLN3Q96S86 360 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 PTPN18Q99952 460 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 TBL1YQ9BQ87 522 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 CADM1Q9BY67 442 aaKnown RBP8.13□□□□□ -1.11
SMC4-212ENST00000470240 CEP41Q9BYV8 373 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 UBE2OQ9C0C9 1292 aaKnown RBP8.13□□□□□ -1.11
SMC4-212ENST00000470240 SENP6Q9GZR1 1112 aaPredicted RBP8.13□□□□□ -1.11
SMC4-212ENST00000470240 C1orf21Q9H246 121 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 CXorf56Q9H5V9 222 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 CSNK1G1Q9HCP0 422 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 WDR6Q9NNW5 1121 aaKnown RBP8.13□□□□□ -1.11
SMC4-212ENST00000470240 ENTPD7Q9NQZ7 604 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 ABCC13Q9NSE7 274 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 TBC1D13Q9NVG8 400 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 NDE1Q9NXR1 346 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 FLRT1Q9NZU1 646 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 KANSL3Q9P2N6 904 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 COPG2Q9UBF2 871 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 ZNF212Q9UDV6 495 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 BCAP29Q9UHQ4 241 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 GJD2Q9UKL4 321 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 SOX13Q9UN79 622 aa8.13□□□□□ -1.11
SMC4-212ENST00000470240 TRIP12Q14669 1992 aaPredicted RBP8.13□□□□□ -1.11
SMC4-212ENST00000470240 A0A096LPK6 155 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 MYBPHLA2RUH7 354 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 H0Y3Z8 333 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 DFFAO00273 331 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 IRAK2O43187 625 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 TRIM13O60858 407 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 ZNF623O75123 536 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 FKBP6O75344 327 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 LRIG2O94898 1065 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 PSMG1O95456 288 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 CELA2BP08218 269 aaPredicted RBP8.12□□□□□ -1.11
SMC4-212ENST00000470240 TPBGLP0DKB5 382 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 FGF3P11487 239 aaPredicted RBP8.12□□□□□ -1.11
SMC4-212ENST00000470240 ACADSP16219 412 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 THPOP40225 353 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 MAP2K3P46734 347 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 RAP1GDS1P52306 607 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 SEC13P55735 322 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 PITX1P78337 314 aaPredicted RBP8.12□□□□□ -1.11
SMC4-212ENST00000470240 KDSRQ06136 332 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 SLC34A1Q06495 639 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 MTA1Q13330 715 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 SLC12A1Q13621 1099 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 LAMB3Q13751 1172 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 PCLAFQ15004 111 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 RCN1Q15293 331 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 TEAD4Q15561 434 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 CCL14Q16627 93 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 UPP1Q16831 310 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 ACCSLQ4AC99 568 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 PCID2Q5JVF3 399 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 ACBD5Q5T8D3 534 aaPredicted RBP8.12□□□□□ -1.11
SMC4-212ENST00000470240 TEDDM1Q5T9Z0 273 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 METTL21CQ5VZV1 264 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 PM20D1Q6GTS8 502 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 KLC3Q6P597 504 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 TLDC1Q6P9B6 456 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 ACAD11Q709F0 780 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 SETD3Q86TU7 594 aaPredicted RBP8.12□□□□□ -1.11
SMC4-212ENST00000470240 SERINC5Q86VE9 423 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 RASAL3Q86YV0 1011 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 ZNF295-AS1Q8N0V1 137 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 DCLK2Q8N568 766 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 MAB21L3Q8N8X9 362 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 URGCPQ8TCY9 931 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 PPP1R13LQ8WUF5 828 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 DNAJC9Q8WXX5 260 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 ARNTL2Q8WYA1 636 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 EDEM1Q92611 657 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 JADE3Q92613 823 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 ISL2Q96A47 359 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 NAF1Q96HR8 494 aaKnown RBP8.12□□□□□ -1.11
SMC4-212ENST00000470240 TEKT5Q96M29 485 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 MIPEPQ99797 713 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 ZCCHC2Q9C0B9 1178 aaKnown RBP8.12□□□□□ -1.11
SMC4-212ENST00000470240 TRPV6Q9H1D0 765 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 TSPAN10Q9H1Z9 355 aaPredicted RBP8.12□□□□□ -1.11
SMC4-212ENST00000470240 VCXQ9H320 206 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 RHOJQ9H4E5 214 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 DENND2DQ9H6A0 471 aaPredicted RBP8.12□□□□□ -1.11
SMC4-212ENST00000470240 PLAC1Q9HBJ0 212 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 NMRAL1Q9HBL8 299 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 MRM3Q9HC36 420 aaKnown RBP8.12□□□□□ -1.11
SMC4-212ENST00000470240 NEUROD4Q9HD90 331 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 IARS2Q9NSE4 1012 aaKnown RBP8.12□□□□□ -1.11
SMC4-212ENST00000470240 ARMCX1Q9P291 453 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 DNAJB4Q9UDY4 337 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 PCDHB12Q9Y5F1 795 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 PCDHGC4Q9Y5F7 938 aa8.12□□□□□ -1.11
SMC4-212ENST00000470240 TDRD15B5MCY1 1934 aaKnown RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 MYO18AQ92614 2054 aaKnown RBP8.11□□□□□ -1.11
SMC4-212ENST00000470240 A0A087X1B8 175 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 HMX2A2RU54 273 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 CAPN14A8MX76 684 aa8.11□□□□□ -1.11
SMC4-212ENST00000470240 HHLA1C9JL84 531 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms