RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 POLR1EQ9GZS1 481 aaKnown RBP21.13■□□□□ 0.97
BRAF-202ENST00000469930 LHX3Q9UBR4 397 aa21.13■□□□□ 0.97
BRAF-202ENST00000469930 SUN2Q9UH99 717 aa21.13■□□□□ 0.97
BRAF-202ENST00000469930 CA14Q9ULX7 337 aa21.13■□□□□ 0.97
BRAF-202ENST00000469930 SHROOM3Q8TF72 1996 aa21.12■□□□□ 0.97
BRAF-202ENST00000469930 K7ERQ8 282 aa21.12■□□□□ 0.97
BRAF-202ENST00000469930 ZBTB24O43167 697 aaPredicted RBP21.12■□□□□ 0.97
BRAF-202ENST00000469930 HLA-DQB2P05538 268 aa21.12■□□□□ 0.97
BRAF-202ENST00000469930 CD68P34810 354 aaPredicted RBP21.12■□□□□ 0.97
BRAF-202ENST00000469930 STK19P49842 368 aaPredicted RBP21.12■□□□□ 0.97
BRAF-202ENST00000469930 SIGLEC14Q08ET2 396 aa21.12■□□□□ 0.97
BRAF-202ENST00000469930 PTK6Q13882 451 aa21.12■□□□□ 0.97
BRAF-202ENST00000469930 LRRC32Q14392 662 aa21.12■□□□□ 0.97
BRAF-202ENST00000469930 ZNF235Q14590 738 aa21.12■□□□□ 0.97
BRAF-202ENST00000469930 PARP6Q2NL67 630 aa21.12■□□□□ 0.97
BRAF-202ENST00000469930 HNRNPA1L2Q32P51 320 aaKnown RBP21.12■□□□□ 0.97
BRAF-202ENST00000469930 C22orf39Q6P5X5 142 aa21.12■□□□□ 0.97
BRAF-202ENST00000469930 PID1Q7Z2X4 250 aa21.12■□□□□ 0.97
BRAF-202ENST00000469930 PGBD5Q8N414 524 aa21.12■□□□□ 0.97
BRAF-202ENST00000469930 ZNF513Q8N8E2 541 aaPredicted RBP21.12■□□□□ 0.97
BRAF-202ENST00000469930 USP33Q8TEY7 942 aa21.12■□□□□ 0.97
BRAF-202ENST00000469930 EDAQ92838 391 aa21.12■□□□□ 0.97
BRAF-202ENST00000469930 TADA1Q96BN2 335 aa21.12■□□□□ 0.97
BRAF-202ENST00000469930 FCRL5Q96RD9 977 aa21.12■□□□□ 0.97
BRAF-202ENST00000469930 UHRF1Q96T88 793 aaPredicted RBP21.12■□□□□ 0.97
BRAF-202ENST00000469930 SLC25A51Q9H1U9 297 aa21.12■□□□□ 0.97
BRAF-202ENST00000469930 GLOD4Q9HC38 313 aa21.12■□□□□ 0.97
BRAF-202ENST00000469930 LTB4R2Q9NPC1 389 aa21.12■□□□□ 0.97
BRAF-202ENST00000469930 SEPT10Q9P0V9 454 aa21.12■□□□□ 0.97
BRAF-202ENST00000469930 KLHL8Q9P2G9 620 aaPredicted RBP21.12■□□□□ 0.97
BRAF-202ENST00000469930 ACTL7AQ9Y615 435 aa21.12■□□□□ 0.97
BRAF-202ENST00000469930 WASH3PC4AMC7 463 aa21.11■□□□□ 0.97
BRAF-202ENST00000469930 SLU7O95391 586 aaKnown RBP21.11■□□□□ 0.97
BRAF-202ENST00000469930 KRT14P02533 472 aa21.11■□□□□ 0.97
BRAF-202ENST00000469930 RPL22P35268 128 aaKnown RBP21.11■□□□□ 0.97
BRAF-202ENST00000469930 MAPK8P45983 427 aa21.11■□□□□ 0.97
BRAF-202ENST00000469930 SNRPD1P62314 119 aaKnown RBP21.11■□□□□ 0.97
BRAF-202ENST00000469930 FZD5Q13467 585 aa21.11■□□□□ 0.97
BRAF-202ENST00000469930 EGFLAMQ63HQ2 1017 aa21.11■□□□□ 0.97
BRAF-202ENST00000469930 LEKR1Q6ZMV7 388 aa21.11■□□□□ 0.97
BRAF-202ENST00000469930 JAMLQ86YT9 394 aa21.11■□□□□ 0.97
BRAF-202ENST00000469930 TSEN2Q8NCE0 465 aaKnown RBP21.11■□□□□ 0.97
BRAF-202ENST00000469930 OR2AP1Q8NGE2 309 aa21.11■□□□□ 0.97
BRAF-202ENST00000469930 ARRDC2Q8TBH0 407 aa21.11■□□□□ 0.97
BRAF-202ENST00000469930 CCDC110Q8TBZ0 833 aa21.11■□□□□ 0.97
BRAF-202ENST00000469930 NECAB3Q96P71 396 aaPredicted RBP21.11■□□□□ 0.97
BRAF-202ENST00000469930 NUDCD1Q96RS6 583 aa21.11■□□□□ 0.97
BRAF-202ENST00000469930 GABRG3Q99928 467 aa21.11■□□□□ 0.97
BRAF-202ENST00000469930 GBA3Q9H227 469 aa21.11■□□□□ 0.97
BRAF-202ENST00000469930 NT5MQ9NPB1 228 aa21.11■□□□□ 0.97
BRAF-202ENST00000469930 FCF1Q9Y324 198 aaKnown RBP21.11■□□□□ 0.97
BRAF-202ENST00000469930 A0A0C4DFX4 3053 aa21.11■□□□□ 0.97
BRAF-202ENST00000469930 EDDM13A0A1B0GTR0 161 aa21.1■□□□□ 0.97
BRAF-202ENST00000469930 CHURC1-FNTBB4DL54 471 aa21.1■□□□□ 0.97
BRAF-202ENST00000469930 MUSKO15146 869 aa21.1■□□□□ 0.97
BRAF-202ENST00000469930 NEBLO76041 1014 aa21.1■□□□□ 0.97
BRAF-202ENST00000469930 IFNB1P01574 187 aa21.1■□□□□ 0.97
BRAF-202ENST00000469930 NTSR1P30989 418 aa21.1■□□□□ 0.97
BRAF-202ENST00000469930 FDFT1P37268 417 aa21.1■□□□□ 0.97
BRAF-202ENST00000469930 IL12RB1P42701 662 aa21.1■□□□□ 0.97
BRAF-202ENST00000469930 RHOAP61586 193 aa21.1■□□□□ 0.97
BRAF-202ENST00000469930 AP1S1P61966 158 aa21.1■□□□□ 0.97
BRAF-202ENST00000469930 GRM3Q14832 879 aa21.1■□□□□ 0.97
BRAF-202ENST00000469930 FNDC3BQ53EP0 1204 aaKnown RBP21.1■□□□□ 0.97
BRAF-202ENST00000469930 CARD16Q5EG05 197 aa21.1■□□□□ 0.97
BRAF-202ENST00000469930 EMC10Q5UCC4 262 aa21.1■□□□□ 0.97
BRAF-202ENST00000469930 ARHGEF18Q6ZSZ5 1173 aa21.1■□□□□ 0.97
BRAF-202ENST00000469930 SIX5Q8N196 739 aa21.1■□□□□ 0.97
BRAF-202ENST00000469930 GLIS1Q8NBF1 620 aa21.1■□□□□ 0.97
BRAF-202ENST00000469930 NOA1Q8NC60 698 aaKnown RBP21.1■□□□□ 0.97
BRAF-202ENST00000469930 PTPRN2Q92932 1015 aa21.1■□□□□ 0.97
BRAF-202ENST00000469930 IMP4Q96G21 291 aaKnown RBP21.1■□□□□ 0.97
BRAF-202ENST00000469930 LRIG1Q96JA1 1093 aa21.1■□□□□ 0.97
BRAF-202ENST00000469930 AGAP3Q96P47 875 aa21.1■□□□□ 0.97
BRAF-202ENST00000469930 CPEB1Q9BZB8 566 aaKnown RBP21.1■□□□□ 0.97
BRAF-202ENST00000469930 VPS45Q9NRW7 570 aa21.1■□□□□ 0.97
BRAF-202ENST00000469930 STON1Q9Y6Q2 735 aa21.1■□□□□ 0.97
BRAF-202ENST00000469930 F5P12259 2224 aa21.09■□□□□ 0.97
BRAF-202ENST00000469930 TTC34A8MYJ7 566 aa21.09■□□□□ 0.97
BRAF-202ENST00000469930 BHMG1C9JSJ3 638 aaPredicted RBP21.09■□□□□ 0.97
BRAF-202ENST00000469930 ALOX15BO15296 676 aa21.09■□□□□ 0.97
BRAF-202ENST00000469930 TTI1O43156 1089 aa21.09■□□□□ 0.97
BRAF-202ENST00000469930 RAD51CO43502 376 aa21.09■□□□□ 0.97
BRAF-202ENST00000469930 DCXO43602 365 aa21.09■□□□□ 0.97
BRAF-202ENST00000469930 IGSF6O95976 241 aa21.09■□□□□ 0.97
BRAF-202ENST00000469930 TARSP26639 723 aaKnown RBP21.09■□□□□ 0.97
BRAF-202ENST00000469930 MAGEA6P43360 314 aa21.09■□□□□ 0.97
BRAF-202ENST00000469930 DRG2P55039 364 aaKnown RBP21.09■□□□□ 0.97
BRAF-202ENST00000469930 PPP1R7Q15435 360 aa21.09■□□□□ 0.97
BRAF-202ENST00000469930 SDE2Q6IQ49 451 aa21.09■□□□□ 0.97
BRAF-202ENST00000469930 SERPINA13PQ6UXR4 307 aa21.09■□□□□ 0.97
BRAF-202ENST00000469930 SRLQ86TD4 932 aa21.09■□□□□ 0.97
BRAF-202ENST00000469930 IL17RCQ8NAC3 791 aa21.09■□□□□ 0.97
BRAF-202ENST00000469930 OR2A12Q8NGT7 310 aa21.09■□□□□ 0.97
BRAF-202ENST00000469930 CLDN23Q96B33 292 aa21.09■□□□□ 0.97
BRAF-202ENST00000469930 GDAP1L1Q96MZ0 367 aa21.09■□□□□ 0.97
BRAF-202ENST00000469930 FBRSQ9HAH7 460 aa21.09■□□□□ 0.97
BRAF-202ENST00000469930 ERI2A8K979 691 aaKnown RBP21.08■□□□□ 0.97
BRAF-202ENST00000469930 EFCAB8A8MWE9 144 aa21.08■□□□□ 0.97
BRAF-202ENST00000469930 NDC80O14777 642 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms