RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 KLHDC8BQ8IXV7 354 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 TTC8Q8TAM2 541 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 ARRDC2Q8TBH0 407 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 HLA-CQ95604 372 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 PSKH2Q96QS6 385 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 RBM15Q96T37 977 aaKnown RBP eCLIP13.04□□□□□ -0.32
RUNX1-213ENST00000469087 TRMT61BQ9BVS5 477 aaKnown RBP13.04□□□□□ -0.32
RUNX1-213ENST00000469087 SLC25A51Q9H1U9 297 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 ZNF446Q9NWS9 450 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 TULP3O75386 442 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 MMP2P08253 660 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 GDI1P31150 447 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 LMAN1P49257 510 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 DGKGP49619 791 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 MESP2Q0VG99 397 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 SMAD4Q13485 552 aaKnown RBP13.04□□□□□ -0.32
RUNX1-213ENST00000469087 HTR4Q13639 388 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 ZNF235Q14590 738 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 MSS51Q4VC12 460 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 RETSATQ6NUM9 610 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 MTSS1LQ765P7 747 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 ZNF534Q76KX8 674 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.04□□□□□ -0.32
RUNX1-213ENST00000469087 ZNF557Q8N988 423 aaPredicted RBP13.04□□□□□ -0.32
RUNX1-213ENST00000469087 MCUQ8NE86 351 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 IMP4Q96G21 291 aaKnown RBP13.04□□□□□ -0.32
RUNX1-213ENST00000469087 RPL10LQ96L21 214 aaKnown RBP13.04□□□□□ -0.32
RUNX1-213ENST00000469087 XPO6Q96QU8 1125 aaKnown RBP13.04□□□□□ -0.32
RUNX1-213ENST00000469087 EIF2B3Q9NR50 452 aaKnown RBP13.04□□□□□ -0.32
RUNX1-213ENST00000469087 SEPT3Q9UH03 358 aa13.04□□□□□ -0.32
RUNX1-213ENST00000469087 C2CD4DB7Z1M9 353 aa13.03□□□□□ -0.32
RUNX1-213ENST00000469087 ARNTLO00327 626 aa13.03□□□□□ -0.32
RUNX1-213ENST00000469087 SMAD6O43541 496 aaKnown RBP13.03□□□□□ -0.32
RUNX1-213ENST00000469087 USP12O75317 370 aa13.03□□□□□ -0.32
RUNX1-213ENST00000469087 PPFIA2O75334 1257 aa13.03□□□□□ -0.32
RUNX1-213ENST00000469087 AP2A1O95782 977 aa13.03□□□□□ -0.32
RUNX1-213ENST00000469087 RGRP47804 291 aa13.03□□□□□ -0.32
RUNX1-213ENST00000469087 CDK16Q00536 496 aa13.03□□□□□ -0.32
RUNX1-213ENST00000469087 PRPSAP1Q14558 356 aa13.03□□□□□ -0.32
RUNX1-213ENST00000469087 HP1BP3Q5SSJ5 553 aaPredicted RBP13.03□□□□□ -0.32
RUNX1-213ENST00000469087 SERPINB12Q96P63 405 aa13.03□□□□□ -0.32
RUNX1-213ENST00000469087 SEMA3CQ99985 751 aa13.03□□□□□ -0.32
RUNX1-213ENST00000469087 CINPQ9BW66 212 aaPredicted RBP13.03□□□□□ -0.32
RUNX1-213ENST00000469087 FOXP3Q9BZS1 431 aa13.03□□□□□ -0.32
RUNX1-213ENST00000469087 POLR1EQ9GZS1 481 aaKnown RBP13.03□□□□□ -0.32
RUNX1-213ENST00000469087 TSPYL1Q9H0U9 437 aa13.03□□□□□ -0.32
RUNX1-213ENST00000469087 SEMA4AQ9H3S1 761 aa13.03□□□□□ -0.32
RUNX1-213ENST00000469087 AAR2Q9Y312 384 aaKnown RBP13.03□□□□□ -0.32
RUNX1-213ENST00000469087 FCF1Q9Y324 198 aaKnown RBP13.03□□□□□ -0.32
RUNX1-213ENST00000469087 PMPCBO75439 489 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 BANF1O75531 89 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 ANXA9O76027 345 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 TMCC1O94876 653 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 SUN1O94901 812 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 CR2P20023 1033 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 GJA4P35212 333 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 HSPA9P38646 679 aaKnown RBP13.02□□□□□ -0.32
RUNX1-213ENST00000469087 CD86P42081 329 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 TNNT3P45378 269 aaPredicted RBP13.02□□□□□ -0.32
RUNX1-213ENST00000469087 STK19P49842 368 aaPredicted RBP13.02□□□□□ -0.32
RUNX1-213ENST00000469087 SCNN1BP51168 640 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 ARL4CP56559 192 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 SLC20A2Q08357 652 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 NR1H3Q13133 447 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 DMC1Q14565 340 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 HIF1AQ16665 826 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 UBAP2Q5T6F2 1119 aaKnown RBP13.02□□□□□ -0.32
RUNX1-213ENST00000469087 MBLAC2Q68D91 279 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 NAIF1Q69YI7 327 aaPredicted RBP13.02□□□□□ -0.32
RUNX1-213ENST00000469087 ALG1LQ6GMV1 187 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 RNF135Q8IUD6 432 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 AHI1Q8N157 1196 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 AGGF1Q8N302 714 aaeCLIP13.02□□□□□ -0.32
RUNX1-213ENST00000469087 BBS5Q8N3I7 341 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 TADA1Q96BN2 335 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 CHFRQ96EP1 664 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 EXOC2Q96KP1 924 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 NSMCE3Q96MG7 304 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 MGME1Q9BQP7 344 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 FUT8Q9BYC5 575 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 SLC27A6Q9Y2P4 619 aa13.02□□□□□ -0.32
RUNX1-213ENST00000469087 ERI2A8K979 691 aaKnown RBP13.02□□□□□ -0.33
RUNX1-213ENST00000469087 E7ESA3 106 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 ALOX15BO15296 676 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 ZNF821O75541 412 aaPredicted RBP13.02□□□□□ -0.33
RUNX1-213ENST00000469087 AGTP01019 485 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 SRCP12931 536 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 OPRD1P41143 372 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 SERPINH1P50454 418 aaKnown RBP13.02□□□□□ -0.33
RUNX1-213ENST00000469087 PMS2P54278 862 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 GEMP55040 296 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 SKOR1P84550 965 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 ECT2LQ008S8 904 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 NSUN2Q08J23 767 aaKnown RBP eCLIP13.02□□□□□ -0.33
RUNX1-213ENST00000469087 PDIA2Q13087 525 aaKnown RBP13.02□□□□□ -0.33
RUNX1-213ENST00000469087 CBLBQ13191 982 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 CASP8Q14790 479 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 SLMAPQ14BN4 828 aa13.02□□□□□ -0.33
RUNX1-213ENST00000469087 FASTKD3Q14CZ7 662 aaKnown RBP13.02□□□□□ -0.33
RUNX1-213ENST00000469087 UAP1Q16222 522 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms