RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 RNASEH2AO75792 299 aaKnown RBP5.45□□□□□ -1.54
LSM5-209ENST00000468872 CBX6O95503 412 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 NFATC1O95644 943 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 DDAH2O95865 285 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 WNT1P04628 370 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 COX7A2P14406 83 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 POLD2P49005 469 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 CYP2J2P51589 502 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 RPE65Q16518 533 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 C5orf22Q49AR2 442 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 SLC9B1Q4ZJI4 515 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 EARS2Q5JPH6 523 aaKnown RBP5.45□□□□□ -1.54
LSM5-209ENST00000468872 TECPR1Q7Z6L1 1165 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 GHDCQ8N2G8 530 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 CPXM2Q8N436 756 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 NANOGP1Q8N7R0 232 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 PIMREGQ9BSJ6 248 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 PCDHB16Q9NRJ7 776 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 TBC1D14Q9P2M4 693 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 PEMTQ9UBM1 199 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 DHDHQ9UQ10 334 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 CLDN16Q9Y5I7 305 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 SCINQ9Y6U3 715 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 BICRAQ9NZM4 1560 aa5.45□□□□□ -1.54
LSM5-209ENST00000468872 PI4KAP2A4QPH2 592 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 LDLRAD4O15165 306 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 TGFB1I1O43294 461 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 USP12O75317 370 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 NEURL1O76050 574 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 SERPINC1P01008 464 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 CLEC3BP05452 202 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 LDHCP07864 332 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 CHMP24386 653 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 ABCD1P33897 745 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 SKIV2L2P42285 1042 aaKnown RBP5.44□□□□□ -1.54
LSM5-209ENST00000468872 SLC12A2P55011 1212 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 HSF1Q00613 529 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 CFHR1Q03591 330 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 FOXD4Q12950 439 aaPredicted RBP5.44□□□□□ -1.54
LSM5-209ENST00000468872 SNX30Q5VWJ9 437 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 TMEM81Q6P7N7 255 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 LRIG3Q6UXM1 1119 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 B4GALNT4Q76KP1 1039 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 CPLX4Q7Z7G2 160 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 CNTROBQ8N137 903 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 DNAAF1Q8NEP3 725 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 PIGOQ8TEQ8 1089 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 COQ8BQ96D53 544 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 TMX4Q9H1E5 349 aaPredicted RBP5.44□□□□□ -1.54
LSM5-209ENST00000468872 PDCL3Q9H2J4 239 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 BRF2Q9HAW0 419 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 KRT84Q9NSB2 600 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 ATP8A2Q9NTI2 1148 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 IL1RAPL1Q9NZN1 696 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 HSPB7Q9UBY9 170 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 IPO11Q9UI26 975 aaKnown RBP5.44□□□□□ -1.54
LSM5-209ENST00000468872 FBXO2Q9UK22 296 aaPredicted RBP5.44□□□□□ -1.54
LSM5-209ENST00000468872 PIAS3Q9Y6X2 628 aa5.44□□□□□ -1.54
LSM5-209ENST00000468872 TEX13CA0A0J9YWL9 993 aa5.43□□□□□ -1.54
LSM5-209ENST00000468872 NTN1O95631 604 aa5.43□□□□□ -1.54
LSM5-209ENST00000468872 FGBP02675 491 aa5.43□□□□□ -1.54
LSM5-209ENST00000468872 KLRC2P26717 231 aa5.43□□□□□ -1.54
LSM5-209ENST00000468872 CHRNA5P30532 468 aa5.43□□□□□ -1.54
LSM5-209ENST00000468872 ICAM3P32942 547 aa5.43□□□□□ -1.54
LSM5-209ENST00000468872 DCTN2Q13561 401 aaKnown RBP5.43□□□□□ -1.54
LSM5-209ENST00000468872 TBC1D9BQ66K14 1250 aa5.43□□□□□ -1.54
LSM5-209ENST00000468872 CFAP161Q6P656 301 aa5.43□□□□□ -1.54
LSM5-209ENST00000468872 SHC4Q6S5L8 630 aa5.43□□□□□ -1.54
LSM5-209ENST00000468872 CYB5R4Q7L1T6 521 aa5.43□□□□□ -1.54
LSM5-209ENST00000468872 CCDC25Q86WR0 208 aa5.43□□□□□ -1.54
LSM5-209ENST00000468872 NGEFQ8N5V2 710 aa5.43□□□□□ -1.54
LSM5-209ENST00000468872 BCAS4Q8TDM0 211 aa5.43□□□□□ -1.54
LSM5-209ENST00000468872 WIPF2Q8TF74 440 aaPredicted RBP5.43□□□□□ -1.54
LSM5-209ENST00000468872 FAR1Q8WVX9 515 aa5.43□□□□□ -1.54
LSM5-209ENST00000468872 TEFMQ96QE5 360 aaKnown RBP5.43□□□□□ -1.54
LSM5-209ENST00000468872 TREX2Q9BQ50 279 aaPredicted RBP5.43□□□□□ -1.54
LSM5-209ENST00000468872 IFT27Q9BW83 186 aa5.43□□□□□ -1.54
LSM5-209ENST00000468872 SCNM1Q9BWG6 230 aa5.43□□□□□ -1.54
LSM5-209ENST00000468872 HEMGNQ9BXL5 484 aa5.43□□□□□ -1.54
LSM5-209ENST00000468872 HIPK3Q9H422 1215 aa5.43□□□□□ -1.54
LSM5-209ENST00000468872 GRHL1Q9NZI5 618 aa5.43□□□□□ -1.54
LSM5-209ENST00000468872 MPP6Q9NZW5 540 aa5.43□□□□□ -1.54
LSM5-209ENST00000468872 SOCS2O14508 198 aa5.42□□□□□ -1.54
LSM5-209ENST00000468872 ADAM10O14672 748 aa5.42□□□□□ -1.54
LSM5-209ENST00000468872 IKBKBO14920 756 aa5.42□□□□□ -1.54
LSM5-209ENST00000468872 TACC1O75410 805 aa5.42□□□□□ -1.54
LSM5-209ENST00000468872 GALTP07902 379 aa5.42□□□□□ -1.54
LSM5-209ENST00000468872 CD63P08962 238 aa5.42□□□□□ -1.54
LSM5-209ENST00000468872 HSPA1AP0DMV8 641 aaKnown RBP5.42□□□□□ -1.54
LSM5-209ENST00000468872 HSPA1BP0DMV9 641 aaKnown RBP5.42□□□□□ -1.54
LSM5-209ENST00000468872 MAPK4P31152 587 aa5.42□□□□□ -1.54
LSM5-209ENST00000468872 ARL1P40616 181 aaPredicted RBP5.42□□□□□ -1.54
LSM5-209ENST00000468872 EFNA5P52803 228 aa5.42□□□□□ -1.54
LSM5-209ENST00000468872 KRTAP10-9P60411 292 aa5.42□□□□□ -1.54
LSM5-209ENST00000468872 SETQ01105 290 aaPredicted RBP5.42□□□□□ -1.54
LSM5-209ENST00000468872 GHRHRQ02643 423 aa5.42□□□□□ -1.54
LSM5-209ENST00000468872 PKP1Q13835 747 aa5.42□□□□□ -1.54
LSM5-209ENST00000468872 ME3Q16798 604 aa5.42□□□□□ -1.54
LSM5-209ENST00000468872 ZNF260Q3ZCT1 412 aa5.42□□□□□ -1.54
LSM5-209ENST00000468872 TMEM268Q5VZI3 342 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms