RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 ZNF548Q8NEK5 533 aaPredicted RBP13.36□□□□□ -0.27
PTPN7-207ENST00000468385 ZNF397Q8NF99 534 aaPredicted RBP13.36□□□□□ -0.27
PTPN7-207ENST00000468385 SNRNP27Q8WVK2 155 aaKnown RBP13.36□□□□□ -0.27
PTPN7-207ENST00000468385 PPP1R16AQ96I34 528 aa13.36□□□□□ -0.27
PTPN7-207ENST00000468385 NPY6RQ99463 290 aa13.36□□□□□ -0.27
PTPN7-207ENST00000468385 CRACR2AQ9BSW2 395 aa13.36□□□□□ -0.27
PTPN7-207ENST00000468385 SRRTQ9BXP5 876 aaKnown RBP13.36□□□□□ -0.27
PTPN7-207ENST00000468385 SLC17A9Q9BYT1 436 aa13.36□□□□□ -0.27
PTPN7-207ENST00000468385 DPH1Q9BZG8 443 aa13.36□□□□□ -0.27
PTPN7-207ENST00000468385 ABCG4Q9H172 646 aa13.36□□□□□ -0.27
PTPN7-207ENST00000468385 THSD1Q9NS62 852 aa13.36□□□□□ -0.27
PTPN7-207ENST00000468385 KLF15Q9UIH9 416 aa13.36□□□□□ -0.27
PTPN7-207ENST00000468385 SATB2Q9UPW6 733 aa13.36□□□□□ -0.27
PTPN7-207ENST00000468385 FADS3Q9Y5Q0 445 aa13.36□□□□□ -0.27
PTPN7-207ENST00000468385 SPTY2D1-AS1A0A0U1RR47 76 aa13.35□□□□□ -0.27
PTPN7-207ENST00000468385 ENDOD1O94919 500 aa13.35□□□□□ -0.27
PTPN7-207ENST00000468385 ADRB3P13945 408 aa13.35□□□□□ -0.27
PTPN7-207ENST00000468385 NEK3P51956 506 aa13.35□□□□□ -0.27
PTPN7-207ENST00000468385 RPS21P63220 83 aaKnown RBP13.35□□□□□ -0.27
PTPN7-207ENST00000468385 SKOR1P84550 965 aa13.35□□□□□ -0.27
PTPN7-207ENST00000468385 VAC14Q08AM6 782 aa13.35□□□□□ -0.27
PTPN7-207ENST00000468385 CDKN3Q16667 212 aa13.35□□□□□ -0.27
PTPN7-207ENST00000468385 C3orf38Q5JPI3 329 aa13.35□□□□□ -0.27
PTPN7-207ENST00000468385 BRMS1LQ5PSV4 323 aa13.35□□□□□ -0.27
PTPN7-207ENST00000468385 TPRG1LQ5T0D9 272 aa13.35□□□□□ -0.27
PTPN7-207ENST00000468385 KIAA1161Q6NSJ0 714 aa13.35□□□□□ -0.27
PTPN7-207ENST00000468385 ZCCHC8Q6NZY4 707 aaKnown RBP13.35□□□□□ -0.27
PTPN7-207ENST00000468385 GUSBP11Q6P575 273 aa13.35□□□□□ -0.27
PTPN7-207ENST00000468385 PARGQ86W56 976 aa13.35□□□□□ -0.27
PTPN7-207ENST00000468385 OR7D4Q8NG98 312 aa13.35□□□□□ -0.27
PTPN7-207ENST00000468385 SHC3Q92529 594 aa13.35□□□□□ -0.27
PTPN7-207ENST00000468385 PRR11Q96HE9 360 aaPredicted RBP13.35□□□□□ -0.27
PTPN7-207ENST00000468385 FAM81BQ96LP2 452 aa13.35□□□□□ -0.27
PTPN7-207ENST00000468385 WDCPQ9H6R7 721 aa13.35□□□□□ -0.27
PTPN7-207ENST00000468385 EVA1BQ9NVM1 165 aa13.35□□□□□ -0.27
PTPN7-207ENST00000468385 MPP6Q9NZW5 540 aa13.35□□□□□ -0.27
PTPN7-207ENST00000468385 ZNF212Q9UDV6 495 aa13.35□□□□□ -0.27
PTPN7-207ENST00000468385 CSNK1G3Q9Y6M4 447 aa13.35□□□□□ -0.27
PTPN7-207ENST00000468385 BSNQ9UPA5 3926 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 IGLV3-10A0A075B6K4 115 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 EME2A4GXA9 379 aaPredicted RBP13.34□□□□□ -0.27
PTPN7-207ENST00000468385 H3BM21 787 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 SPINT1O43278 529 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 ZMPSTE24O75844 475 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 ITGB7P26010 798 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 RECQLP46063 649 aaPredicted RBP13.34□□□□□ -0.27
PTPN7-207ENST00000468385 RABIFP47224 123 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 SULT1E1P49888 294 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 PAK1Q13153 545 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 LY6DQ14210 128 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 EFL1Q7Z2Z2 1120 aaKnown RBP13.34□□□□□ -0.27
PTPN7-207ENST00000468385 TFAP2DQ7Z6R9 452 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 NT5C3BQ969T7 300 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 PGAP3Q96FM1 320 aaPredicted RBP13.34□□□□□ -0.27
PTPN7-207ENST00000468385 ATXN7L3BQ96GX2 97 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 FEM1CQ96JP0 617 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 C1orf74Q96LT6 269 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 SLC46A1Q96NT5 459 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 KLF6Q99612 283 aaPredicted RBP13.34□□□□□ -0.27
PTPN7-207ENST00000468385 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.34□□□□□ -0.27
PTPN7-207ENST00000468385 CEP44Q9C0F1 390 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 TMPRSS4Q9NRS4 437 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 RRN3Q9NYV6 651 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.34□□□□□ -0.27
PTPN7-207ENST00000468385 APEX2Q9UBZ4 518 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 SALL4Q9UJQ4 1053 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 AJAP1Q9UKB5 411 aaPredicted RBP13.34□□□□□ -0.27
PTPN7-207ENST00000468385 ENTPD2Q9Y5L3 495 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 TRPM6Q9BX84 2022 aa13.34□□□□□ -0.27
PTPN7-207ENST00000468385 TENM4Q6N022 2769 aa13.33□□□□□ -0.27
PTPN7-207ENST00000468385 CPED1A4D0V7 1026 aa13.33□□□□□ -0.28
PTPN7-207ENST00000468385 BIN1O00499 593 aa13.33□□□□□ -0.28
PTPN7-207ENST00000468385 AQP9O43315 295 aa13.33□□□□□ -0.28
PTPN7-207ENST00000468385 AP1G1O43747 822 aa13.33□□□□□ -0.28
PTPN7-207ENST00000468385 OR1E1P30953 314 aa13.33□□□□□ -0.28
PTPN7-207ENST00000468385 L1CAMP32004 1257 aa13.33□□□□□ -0.28
PTPN7-207ENST00000468385 SERPINH1P50454 418 aaKnown RBP13.33□□□□□ -0.28
PTPN7-207ENST00000468385 ARF5P84085 180 aa13.33□□□□□ -0.28
PTPN7-207ENST00000468385 EIF2B5Q13144 721 aaKnown RBP13.33□□□□□ -0.28
PTPN7-207ENST00000468385 PDE1CQ14123 709 aaPredicted RBP13.33□□□□□ -0.28
PTPN7-207ENST00000468385 DRAP1Q14919 205 aaPredicted RBP13.33□□□□□ -0.28
PTPN7-207ENST00000468385 DEFB133Q30KQ1 61 aa13.33□□□□□ -0.28
PTPN7-207ENST00000468385 CARD16Q5EG05 197 aa13.33□□□□□ -0.28
PTPN7-207ENST00000468385 CRTC1Q6UUV9 634 aa13.33□□□□□ -0.28
PTPN7-207ENST00000468385 LRRC31Q6UY01 552 aa13.33□□□□□ -0.28
PTPN7-207ENST00000468385 PARS2Q7L3T8 475 aaKnown RBP13.33□□□□□ -0.28
PTPN7-207ENST00000468385 ZDHHC17Q8IUH5 632 aa13.33□□□□□ -0.28
PTPN7-207ENST00000468385 PCDH20Q8N6Y1 951 aaKnown RBP13.33□□□□□ -0.28
PTPN7-207ENST00000468385 GRAMD1AQ96CP6 724 aa13.33□□□□□ -0.28
PTPN7-207ENST00000468385 LENG8Q96PV6 779 aaPredicted RBP13.33□□□□□ -0.28
PTPN7-207ENST00000468385 TBCBQ99426 244 aa13.33□□□□□ -0.28
PTPN7-207ENST00000468385 HEPHQ9BQS7 1158 aa13.33□□□□□ -0.28
PTPN7-207ENST00000468385 PLCB1Q9NQ66 1216 aa13.33□□□□□ -0.28
PTPN7-207ENST00000468385 STAP1Q9ULZ2 295 aa13.33□□□□□ -0.28
PTPN7-207ENST00000468385 PCDHGA8Q9Y5G5 932 aa13.33□□□□□ -0.28
PTPN7-207ENST00000468385 ACTL7AQ9Y615 435 aa13.33□□□□□ -0.28
PTPN7-207ENST00000468385 ILVBLA1L0T0 632 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 PMS2P1A4D2B8 440 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 CDRT15L2A8MXV6 281 aa13.32□□□□□ -0.28
PTPN7-207ENST00000468385 B8ZZF3 427 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms