RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 TMEM259Q4ZIN3 620 aa21.48■■□□□ 1.03
COL9A3-207ENST00000467819 CARD16Q5EG05 197 aa21.48■■□□□ 1.03
COL9A3-207ENST00000467819 TMC6Q7Z403 805 aa21.48■■□□□ 1.03
COL9A3-207ENST00000467819 PTAR1Q7Z6K3 402 aaPredicted RBP21.48■■□□□ 1.03
COL9A3-207ENST00000467819 SLC22A18ASQ8N1D0 253 aa21.48■■□□□ 1.03
COL9A3-207ENST00000467819 OR4C6Q8NH72 309 aa21.48■■□□□ 1.03
COL9A3-207ENST00000467819 HEPHQ9BQS7 1158 aa21.48■■□□□ 1.03
COL9A3-207ENST00000467819 TM6SF2Q9BZW4 377 aa21.48■■□□□ 1.03
COL9A3-207ENST00000467819 ZDHHC6Q9H6R6 413 aa21.48■■□□□ 1.03
COL9A3-207ENST00000467819 BPTFQ12830 3046 aa21.47■■□□□ 1.03
COL9A3-207ENST00000467819 TLX3O43711 291 aaPredicted RBP21.47■■□□□ 1.03
COL9A3-207ENST00000467819 PIAS2O75928 621 aa21.47■■□□□ 1.03
COL9A3-207ENST00000467819 ADRB3P13945 408 aa21.47■■□□□ 1.03
COL9A3-207ENST00000467819 ITGB7P26010 798 aa21.47■■□□□ 1.03
COL9A3-207ENST00000467819 EEF1GP26641 437 aaKnown RBP21.47■■□□□ 1.03
COL9A3-207ENST00000467819 ACVRL1P37023 503 aa21.47■■□□□ 1.03
COL9A3-207ENST00000467819 KLK7P49862 253 aa21.47■■□□□ 1.03
COL9A3-207ENST00000467819 SLC20A2Q08357 652 aa21.47■■□□□ 1.03
COL9A3-207ENST00000467819 PARS2Q7L3T8 475 aaKnown RBP21.47■■□□□ 1.03
COL9A3-207ENST00000467819 ARCQ7LC44 396 aa21.47■■□□□ 1.03
COL9A3-207ENST00000467819 ABI3BPQ7Z7G0 1075 aa21.47■■□□□ 1.03
COL9A3-207ENST00000467819 NRSN2Q9GZP1 204 aa21.47■■□□□ 1.03
COL9A3-207ENST00000467819 GANQ9H2C0 597 aa21.47■■□□□ 1.03
COL9A3-207ENST00000467819 NDFIP2Q9NV92 336 aa21.47■■□□□ 1.03
COL9A3-207ENST00000467819 PPARGC1AQ9UBK2 798 aaKnown RBP21.47■■□□□ 1.03
COL9A3-207ENST00000467819 NOCTQ9UK39 431 aaKnown RBP21.47■■□□□ 1.03
COL9A3-207ENST00000467819 CLCA2Q9UQC9 943 aa21.47■■□□□ 1.03
COL9A3-207ENST00000467819 PTPRQQ9UMZ3 2332 aa21.46■■□□□ 1.03
COL9A3-207ENST00000467819 A6NNZ2 444 aa21.46■■□□□ 1.03
COL9A3-207ENST00000467819 GJB6O95452 261 aa21.46■■□□□ 1.03
COL9A3-207ENST00000467819 ITPKBP27987 946 aa21.46■■□□□ 1.03
COL9A3-207ENST00000467819 L1CAMP32004 1257 aa21.46■■□□□ 1.03
COL9A3-207ENST00000467819 RPS21P63220 83 aaKnown RBP21.46■■□□□ 1.03
COL9A3-207ENST00000467819 FGL2Q14314 439 aa21.46■■□□□ 1.03
COL9A3-207ENST00000467819 RTP5Q14D33 572 aa21.46■■□□□ 1.03
COL9A3-207ENST00000467819 ZNF542PQ5EBM4 170 aa21.46■■□□□ 1.03
COL9A3-207ENST00000467819 RWDD4Q6NW29 188 aaKnown RBP21.46■■□□□ 1.03
COL9A3-207ENST00000467819 Q6ZSR6 202 aa21.46■■□□□ 1.03
COL9A3-207ENST00000467819 ZNF677Q86XU0 584 aa21.46■■□□□ 1.03
COL9A3-207ENST00000467819 OR6K2Q8NGY2 324 aa21.46■■□□□ 1.03
COL9A3-207ENST00000467819 RXFP2Q8WXD0 754 aa21.46■■□□□ 1.03
COL9A3-207ENST00000467819 RFFLQ8WZ73 363 aa21.46■■□□□ 1.03
COL9A3-207ENST00000467819 BBC3Q96PG8 261 aaPredicted RBP21.46■■□□□ 1.03
COL9A3-207ENST00000467819 C11orf70Q9BRQ4 267 aa21.46■■□□□ 1.03
COL9A3-207ENST00000467819 SLC17A9Q9BYT1 436 aa21.46■■□□□ 1.03
COL9A3-207ENST00000467819 VPS16Q9H269 839 aa21.46■■□□□ 1.03
COL9A3-207ENST00000467819 DNAJC28Q9NX36 388 aa21.46■■□□□ 1.03
COL9A3-207ENST00000467819 OR12D3Q9UGF7 316 aa21.46■■□□□ 1.03
COL9A3-207ENST00000467819 FADS3Q9Y5Q0 445 aa21.46■■□□□ 1.03
COL9A3-207ENST00000467819 PAK4O96013 591 aaPredicted RBP21.45■■□□□ 1.02
COL9A3-207ENST00000467819 SDC4P31431 198 aa21.45■■□□□ 1.02
COL9A3-207ENST00000467819 GKP32189 559 aa21.45■■□□□ 1.02
COL9A3-207ENST00000467819 POLR2FP61218 127 aaKnown RBP21.45■■□□□ 1.02
COL9A3-207ENST00000467819 FMO1Q01740 532 aa21.45■■□□□ 1.02
COL9A3-207ENST00000467819 CDR2Q01850 454 aa21.45■■□□□ 1.02
COL9A3-207ENST00000467819 ARL13BQ3SXY8 428 aa21.45■■□□□ 1.02
COL9A3-207ENST00000467819 CCDC14Q49A88 953 aa21.45■■□□□ 1.02
COL9A3-207ENST00000467819 KIAA1161Q6NSJ0 714 aa21.45■■□□□ 1.02
COL9A3-207ENST00000467819 KDM7AQ6ZMT4 941 aa21.45■■□□□ 1.02
COL9A3-207ENST00000467819 RYBPQ8N488 228 aaPredicted RBP21.45■■□□□ 1.02
COL9A3-207ENST00000467819 JOSD2Q8TAC2 188 aa21.45■■□□□ 1.02
COL9A3-207ENST00000467819 SLC30A5Q8TAD4 765 aa21.45■■□□□ 1.02
COL9A3-207ENST00000467819 FEM1CQ96JP0 617 aa21.45■■□□□ 1.02
COL9A3-207ENST00000467819 BMFQ96LC9 184 aa21.45■■□□□ 1.02
COL9A3-207ENST00000467819 NLRC4Q9NPP4 1024 aa21.45■■□□□ 1.02
COL9A3-207ENST00000467819 HECAQ9UBI9 543 aaPredicted RBP21.45■■□□□ 1.02
COL9A3-207ENST00000467819 DNAI1Q9UI46 699 aa21.45■■□□□ 1.02
COL9A3-207ENST00000467819 POM121BA6NF01 834 aa21.44■■□□□ 1.02
COL9A3-207ENST00000467819 RAD51BO15315 384 aa21.44■■□□□ 1.02
COL9A3-207ENST00000467819 CD160O95971 181 aa21.44■■□□□ 1.02
COL9A3-207ENST00000467819 CYP1A1P04798 512 aaPredicted RBP21.44■■□□□ 1.02
COL9A3-207ENST00000467819 GIMD1P0DJR0 217 aa21.44■■□□□ 1.02
COL9A3-207ENST00000467819 ALPPL2P10696 532 aa21.44■■□□□ 1.02
COL9A3-207ENST00000467819 MYF5P13349 255 aa21.44■■□□□ 1.02
COL9A3-207ENST00000467819 CHRNB2P17787 502 aa21.44■■□□□ 1.02
COL9A3-207ENST00000467819 MMP8P22894 467 aa21.44■■□□□ 1.02
COL9A3-207ENST00000467819 ADRA1BP35368 520 aa21.44■■□□□ 1.02
COL9A3-207ENST00000467819 EIF2S3P41091 472 aaKnown RBP21.44■■□□□ 1.02
COL9A3-207ENST00000467819 E2F1Q01094 437 aa21.44■■□□□ 1.02
COL9A3-207ENST00000467819 MANEALQ5VSG8 457 aa21.44■■□□□ 1.02
COL9A3-207ENST00000467819 KYAT3Q6YP21 454 aaKnown RBP21.44■■□□□ 1.02
COL9A3-207ENST00000467819 LEKR1Q6ZMV7 388 aa21.44■■□□□ 1.02
COL9A3-207ENST00000467819 LRRC69Q6ZNQ3 347 aa21.44■■□□□ 1.02
COL9A3-207ENST00000467819 DCBLD1Q8N8Z6 715 aa21.44■■□□□ 1.02
COL9A3-207ENST00000467819 GPT2Q8TD30 523 aa21.44■■□□□ 1.02
COL9A3-207ENST00000467819 MAGEB5Q9BZ81 275 aa21.44■■□□□ 1.02
COL9A3-207ENST00000467819 FAM207AQ9NSI2 230 aaPredicted RBP21.44■■□□□ 1.02
COL9A3-207ENST00000467819 HS3ST3A1Q9Y663 406 aa21.44■■□□□ 1.02
COL9A3-207ENST00000467819 FAM72CH0Y354 149 aa21.43■■□□□ 1.02
COL9A3-207ENST00000467819 BRINP1O60477 761 aa21.43■■□□□ 1.02
COL9A3-207ENST00000467819 NEBLO76041 1014 aa21.43■■□□□ 1.02
COL9A3-207ENST00000467819 MT-CO3P00414 261 aa21.43■■□□□ 1.02
COL9A3-207ENST00000467819 RHOQP17081 205 aa21.43■■□□□ 1.02
COL9A3-207ENST00000467819 ETFBP38117 255 aa21.43■■□□□ 1.02
COL9A3-207ENST00000467819 NRG1Q02297 640 aaPredicted RBP21.43■■□□□ 1.02
COL9A3-207ENST00000467819 FAM72AQ5TYM5 149 aa21.43■■□□□ 1.02
COL9A3-207ENST00000467819 FAM72DQ6L9T8 149 aa21.43■■□□□ 1.02
COL9A3-207ENST00000467819 NLRP14Q86W24 1093 aa21.43■■□□□ 1.02
COL9A3-207ENST00000467819 FAM72BQ86X60 149 aa21.43■■□□□ 1.02
COL9A3-207ENST00000467819 DCP2Q8IU60 420 aaKnown RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms