RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 PCDHA3Q9Y5H8 950 aa11.24□□□□□ -0.61
MSH5-212ENST00000467319 LAMA1P25391 3075 aa11.24□□□□□ -0.61
MSH5-212ENST00000467319 hCG_1818297A0A087WSY0 165 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 MUSKO15146 869 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 KRT86O43790 486 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 NRDCO43847 1150 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 RNASEH1O60930 286 aaKnown RBP11.23□□□□□ -0.61
MSH5-212ENST00000467319 EPN2O95208 641 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 DNTTP04053 509 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 CHRNA3P32297 505 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 SLC10A2Q12908 348 aaPredicted RBP11.23□□□□□ -0.61
MSH5-212ENST00000467319 RFTN1Q14699 578 aaPredicted RBP11.23□□□□□ -0.61
MSH5-212ENST00000467319 ELF2Q15723 593 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 CARD16Q5EG05 197 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 ATXN7L2Q5T6C5 722 aaPredicted RBP11.23□□□□□ -0.61
MSH5-212ENST00000467319 AGBL4Q5VU57 503 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 SLC36A4Q6YBV0 504 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 CEP68Q76N32 757 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 ZNF354CQ86Y25 554 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 SYCE1Q8N0S2 351 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 TMIEQ8NEW7 156 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 PIP4K2CQ8TBX8 421 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 GRIN3AQ8TCU5 1115 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 MAML1Q92585 1016 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 RNF25Q96BH1 459 aaPredicted RBP11.23□□□□□ -0.61
MSH5-212ENST00000467319 HDAC11Q96DB2 347 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 TOE1Q96GM8 510 aaKnown RBP11.23□□□□□ -0.61
MSH5-212ENST00000467319 RBM41Q96IZ5 413 aaKnown RBP11.23□□□□□ -0.61
MSH5-212ENST00000467319 LOXL4Q96JB6 756 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 TSGA13Q96PP4 275 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 PSKH2Q96QS6 385 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 PCED1AQ9H1Q7 454 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 PPP2R2CQ9Y2T4 447 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.23□□□□□ -0.61
MSH5-212ENST00000467319 NUMA1Q14980 2115 aa11.23□□□□□ -0.61
MSH5-212ENST00000467319 DMXL1Q9Y485 3027 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 A0A1W2PP55 124 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 MIF4GDA9UHW6 222 aaKnown RBP11.22□□□□□ -0.61
MSH5-212ENST00000467319 C1QTNF3-AMACRE9PGA6 284 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 APOL1O14791 398 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 DDX3YO15523 660 aaKnown RBP11.22□□□□□ -0.61
MSH5-212ENST00000467319 SLC7A4O43246 635 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 ZRANB2O95218 330 aaKnown RBP eCLIP11.22□□□□□ -0.61
MSH5-212ENST00000467319 FTCDO95954 541 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 IGSF6O95976 241 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 IL1BP01584 269 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 PRNPP04156 253 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 ACADMP11310 421 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 TNNT1P13805 278 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 CR2P20023 1033 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 ITGB7P26010 798 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 OXTRP30559 389 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 SLC8A1P32418 973 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 RECQLP46063 649 aaPredicted RBP11.22□□□□□ -0.61
MSH5-212ENST00000467319 RGRP47804 291 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 ADPRHP54922 357 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 COPS2P61201 443 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 RHOAP61586 193 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 SNRPD1P62314 119 aaKnown RBP11.22□□□□□ -0.61
MSH5-212ENST00000467319 ADCY2Q08462 1091 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 SLC10A7Q0GE19 358 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 LBRQ14739 615 aaKnown RBP11.22□□□□□ -0.61
MSH5-212ENST00000467319 TFDP3Q5H9I0 405 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 ZFYVE27Q5T4F4 411 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 PIP5KL1Q5T9C9 394 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 DCAF12L1Q5VU92 463 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 FAM46CQ5VWP2 391 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 PEAR1Q5VY43 1037 aaPredicted RBP11.22□□□□□ -0.61
MSH5-212ENST00000467319 ALG1LQ6GMV1 187 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 PRR23BQ6ZRT6 265 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 PEX26Q7Z412 305 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 SLC41A1Q8IVJ1 513 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 RCOR2Q8IZ40 523 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 ABCA7Q8IZY2 2146 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 CADM4Q8NFZ8 388 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 OR6K2Q8NGY2 324 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 ANP32BQ92688 251 aaKnown RBP11.22□□□□□ -0.61
MSH5-212ENST00000467319 HES6Q96HZ4 224 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 LRIG1Q96JA1 1093 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 MGME1Q9BQP7 344 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 HEPHQ9BQS7 1158 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 HERPUD2Q9BSE4 406 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 FBXL12Q9NXK8 326 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 SEPT3Q9UH03 358 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 IL36AQ9UHA7 158 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 EFR3BQ9Y2G0 817 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 CFAP54Q96N23 3096 aa11.22□□□□□ -0.61
MSH5-212ENST00000467319 TSPAN11A1L157 253 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 BNIP3LO60238 219 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 LEFTY1O75610 366 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 RHOBTB1O94844 696 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 MAP3K6O95382 1288 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 RETP07949 1114 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 KRT10P13645 584 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 PECAM1P16284 738 aaPredicted RBP11.21□□□□□ -0.61
MSH5-212ENST00000467319 ZFXP17010 805 aaPredicted RBP11.21□□□□□ -0.61
MSH5-212ENST00000467319 MX2P20592 715 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 TGM2P21980 687 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 GKP32189 559 aa11.21□□□□□ -0.61
MSH5-212ENST00000467319 ACSL1P33121 698 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms