RNA–Protein interactions for RNA: ENST00000466959.1

PDCD11-202, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 500 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-202ENST00000466959 K7ERQ8 282 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 SMAD6O43541 496 aaKnown RBP13.48□□□□□ -0.25
PDCD11-202ENST00000466959 NEBLO76041 1014 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 CHRM1P11229 460 aaPredicted RBP13.48□□□□□ -0.25
PDCD11-202ENST00000466959 CD72P21854 359 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 HSPA9P38646 679 aaKnown RBP13.48□□□□□ -0.25
PDCD11-202ENST00000466959 NNMTP40261 264 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 NBL1P41271 181 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 KIR2DL1P43626 348 aaPredicted RBP13.48□□□□□ -0.25
PDCD11-202ENST00000466959 GDF10P55107 478 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 CCINQ13939 588 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 DHX34Q14147 1143 aaKnown RBP13.48□□□□□ -0.25
PDCD11-202ENST00000466959 ZNF234Q14588 700 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 ZNF235Q14590 738 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 FBXO43Q4G163 708 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 FNDC3BQ53EP0 1204 aaKnown RBP13.48□□□□□ -0.25
PDCD11-202ENST00000466959 TEX44Q53QW1 395 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 EGFLAMQ63HQ2 1017 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 C22orf39Q6P5X5 142 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 GSTA5Q7RTV2 222 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 CCDC26Q8TAB7 109 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 USP33Q8TEY7 942 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 ISG20Q96AZ6 181 aaKnown RBP13.48□□□□□ -0.25
PDCD11-202ENST00000466959 ZNF419Q96HQ0 510 aaPredicted RBP13.48□□□□□ -0.25
PDCD11-202ENST00000466959 SPATA13Q96N96 652 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 PSKH2Q96QS6 385 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 CINPQ9BW66 212 aaPredicted RBP13.48□□□□□ -0.25
PDCD11-202ENST00000466959 HAUS2Q9NVX0 235 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 RBM22Q9NW64 420 aaKnown RBP eCLIP13.48□□□□□ -0.25
PDCD11-202ENST00000466959 LHX3Q9UBR4 397 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 SLCO3A1Q9UIG8 710 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 TRHDEQ9UKU6 1024 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 NDRG2Q9UN36 371 aaKnown RBP13.48□□□□□ -0.25
PDCD11-202ENST00000466959 SLC8A2Q9UPR5 921 aa13.48□□□□□ -0.25
PDCD11-202ENST00000466959 FCF1Q9Y324 198 aaKnown RBP13.48□□□□□ -0.25
PDCD11-202ENST00000466959 MYO18AQ92614 2054 aaKnown RBP13.48□□□□□ -0.25
PDCD11-202ENST00000466959 KANSL1LA0AUZ9 987 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 OPHN1O60890 802 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 GCATO75600 419 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 ECEL1O95672 775 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 GAS8O95995 478 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 HLA-DQB2P05538 268 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 PTGIRP43119 386 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 SEC13P55735 322 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 RHOAP61586 193 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 MRPS21P82921 87 aaKnown RBP13.47□□□□□ -0.25
PDCD11-202ENST00000466959 LRRC32Q14392 662 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 DLG2Q15700 870 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 P3H1Q32P28 736 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 DGKKQ5KSL6 1271 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 ANKRD20A2Q5SQ80 823 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 ANKRD20A1Q5TYW2 823 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 EMC10Q5UCC4 262 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 ANKRD20A3Q5VUR7 823 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 ZNF567Q8N184 647 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 ZNF687Q8N1G0 1237 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 MMGT1Q8N4V1 131 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 PCDH20Q8N6Y1 951 aaKnown RBP13.47□□□□□ -0.25
PDCD11-202ENST00000466959 CNTD1Q8N815 330 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 ZNF513Q8N8E2 541 aaPredicted RBP13.47□□□□□ -0.25
PDCD11-202ENST00000466959 CCDC89Q8N998 374 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 TEKT5Q96M29 485 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 NELL2Q99435 816 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 MGME1Q9BQP7 344 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 CEP41Q9BYV8 373 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 PCDH9Q9HC56 1237 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 NT5MQ9NPB1 228 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 LTB4R2Q9NPC1 389 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 KLHL8Q9P2G9 620 aaPredicted RBP13.47□□□□□ -0.25
PDCD11-202ENST00000466959 ATP8A1Q9Y2Q0 1164 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 CKAP5Q14008 2032 aa13.47□□□□□ -0.25
PDCD11-202ENST00000466959 ANTXRLA6NF34 631 aa13.46□□□□□ -0.25
PDCD11-202ENST00000466959 TTC34A8MYJ7 566 aa13.46□□□□□ -0.25
PDCD11-202ENST00000466959 ZBTB24O43167 697 aaPredicted RBP13.46□□□□□ -0.25
PDCD11-202ENST00000466959 GSRP00390 522 aa13.46□□□□□ -0.25
PDCD11-202ENST00000466959 IFNB1P01574 187 aa13.46□□□□□ -0.25
PDCD11-202ENST00000466959 KRT14P02533 472 aa13.46□□□□□ -0.25
PDCD11-202ENST00000466959 TARSP26639 723 aaKnown RBP13.46□□□□□ -0.25
PDCD11-202ENST00000466959 TIE1P35590 1138 aa13.46□□□□□ -0.25
PDCD11-202ENST00000466959 ACTN2P35609 894 aa13.46□□□□□ -0.25
PDCD11-202ENST00000466959 IL12RB1P42701 662 aa13.46□□□□□ -0.25
PDCD11-202ENST00000466959 NRLP54845 237 aa13.46□□□□□ -0.25
PDCD11-202ENST00000466959 DR1Q01658 176 aa13.46□□□□□ -0.25
PDCD11-202ENST00000466959 ENPP2Q13822 863 aa13.46□□□□□ -0.25
PDCD11-202ENST00000466959 UBXN2BQ14CS0 331 aa13.46□□□□□ -0.25
PDCD11-202ENST00000466959 ACCSLQ4AC99 568 aa13.46□□□□□ -0.25
PDCD11-202ENST00000466959 HSF5Q4G112 596 aaPredicted RBP13.46□□□□□ -0.25
PDCD11-202ENST00000466959 ALG1LQ6GMV1 187 aa13.46□□□□□ -0.25
PDCD11-202ENST00000466959 ITPRIPL1Q6GPH6 555 aa13.46□□□□□ -0.25
PDCD11-202ENST00000466959 SERPINA13PQ6UXR4 307 aa13.46□□□□□ -0.25
PDCD11-202ENST00000466959 C4orf22Q6V702 233 aa13.46□□□□□ -0.25
PDCD11-202ENST00000466959 SYDE1Q6ZW31 735 aaPredicted RBP13.46□□□□□ -0.25
PDCD11-202ENST00000466959 PID1Q7Z2X4 250 aa13.46□□□□□ -0.25
PDCD11-202ENST00000466959 TRMT11Q7Z4G4 463 aaKnown RBP13.46□□□□□ -0.25
PDCD11-202ENST00000466959 MAATS1Q7Z4T9 603 aa13.46□□□□□ -0.25
PDCD11-202ENST00000466959 PLPP6Q8IY26 295 aa13.46□□□□□ -0.25
PDCD11-202ENST00000466959 PGBD5Q8N414 524 aa13.46□□□□□ -0.25
PDCD11-202ENST00000466959 TSEN2Q8NCE0 465 aaKnown RBP13.46□□□□□ -0.25
PDCD11-202ENST00000466959 CCDC110Q8TBZ0 833 aa13.46□□□□□ -0.25
PDCD11-202ENST00000466959 FRS2Q8WU20 508 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms