RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, human

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-211	ENST00000466538	CIITA	P33076	1130 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	PTPN9	P43378	593 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	CPA2	P48052	419 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	CTCF	P49711	727 aa	Predicted RBP	4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	CLCNKB	P51801	687 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	RPS3A	P61247	264 aa	Known RBP	4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	TAF11	Q15544	211 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	ALG10	Q5BKT4	473 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	ZNF667	Q5HYK9	610 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	ALG10B	Q5I7T1	473 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	SNX30	Q5VWJ9	437 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	KIAA1614	Q5VZ46	1190 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	NCAPH2	Q6IBW4	605 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	CDC73	Q6P1J9	531 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	KLHL24	Q6TFL4	600 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	FAM160B2	Q86V87	743 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	NME8	Q8N427	588 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	KLHL15	Q96M94	604 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	MAP7D2	Q96T17	732 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	BARD1	Q99728	777 aa	Known RBP	4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	LBHD1	Q9BQE6	289 aa	Predicted RBP	4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	H2AFJ	Q9BTM1	129 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	MUC13	Q9H3R2	512 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	EIF2B3	Q9NR50	452 aa	Known RBP	4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	NSMCE4A	Q9NXX6	385 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	NCKIPSD	Q9NZQ3	722 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	HSPB7	Q9UBY9	170 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	AGO2	Q9UKV8	859 aa	Known RBP	4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	LYVE1	Q9Y5Y7	322 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	SLC4A4	Q9Y6R1	1079 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	PIAS3	Q9Y6X2	628 aa		4.65	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	POLR2A	P24928	1970 aa	Known RBP	4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	TRBV5-7	A0A0A0MS05	114 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	RHOD	O00212	210 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	TGFB1I1	O43294	461 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	DOK2	O60496	412 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	UGDH	O60701	494 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	PTP4A3	O75365	173 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	TACC1	O75410	805 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	HEXA	P06865	529 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	ALOX12	P18054	663 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	CDH2	P19022	906 aa	Predicted RBP	4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	PTGER1	P34995	402 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	DPP6	P42658	865 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	GPR12	P47775	334 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	CENPA	P49450	140 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	DRG2	P55039	364 aa	Known RBP	4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	PROK1	P58294	105 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	SYTL3	Q4VX76	610 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	MIDN	Q504T8	468 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	SERTAD4-AS1	Q5TG53	156 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	FAM205BP	Q63HN1	556 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	TBC1D9B	Q66K14	1250 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	CPLX2	Q6PUV4	134 aa	Known RBP	4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	SLC46A3	Q7Z3Q1	461 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	PXK	Q7Z7A4	578 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	CCDC25	Q86WR0	208 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	OR4N2	Q8NGD1	307 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	KCNG4	Q8TDN1	519 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	CREB3L4	Q8TEY5	395 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	SNRNP27	Q8WVK2	155 aa	Known RBP	4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	USP6NL	Q92738	828 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	FAM149B1	Q96BN6	582 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	SIGLEC11	Q96RL6	698 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	SH2D3A	Q9BRG2	576 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	CXorf56	Q9H5V9	222 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	PCDHB16	Q9NRJ7	776 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	C20orf141	Q9NUB4	165 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	HCFC1R1	Q9NWW0	138 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	EHD2	Q9NZN4	543 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	UTS2R	Q9UKP6	389 aa		4.64	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	RSF1	Q96T23	1441 aa	Predicted RBP	4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	TRBV5-3	A0A0A0MS03	114 aa		4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	MANSC4	A6NHS7	340 aa	Predicted RBP	4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	LRRC53	A6NM62	1247 aa		4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	GTPBP1	O00178	669 aa	Known RBP	4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	BCAR3	O75815	825 aa		4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	SLC2A4	P14672	509 aa		4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	CD72	P21854	359 aa		4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	BMP5	P22003	454 aa		4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	ATP5F1	P24539	256 aa	Predicted RBP	4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	MLH1	P40692	756 aa		4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	RGS2	P41220	211 aa		4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	PKP1	Q13835	747 aa		4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	DAZAP2	Q15038	168 aa	Predicted RBP	4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	MEA1	Q16626	185 aa		4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	CEP78	Q5JTW2	689 aa		4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	CCDC129	Q6ZRS4	1044 aa		4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	GSTA5	Q7RTV2	222 aa		4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	RD3	Q7Z3Z2	195 aa		4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	KDELC2	Q7Z4H8	507 aa		4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	PRIMA1	Q86XR5	153 aa		4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	ADGRG3	Q86Y34	549 aa		4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	DDIAS	Q8IXT1	998 aa		4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	SLC25A41	Q8N5S1	370 aa		4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	DPP10	Q8N608	796 aa		4.63	□□□□□ -1.67
CDC42BPA-211	ENST00000466538	SLC44A5	Q8NCS7	719 aa		4.63	□□□□□ -1.67

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