RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 PDE1BQ01064 536 aa18.53■□□□□ 0.56
COL9A3-205ENST00000466192 IL10RBQ08334 325 aa18.53■□□□□ 0.56
COL9A3-205ENST00000466192 KDELC1Q6UW63 502 aa18.53■□□□□ 0.56
COL9A3-205ENST00000466192 RANBP10Q6VN20 620 aa18.53■□□□□ 0.56
COL9A3-205ENST00000466192 KDELC2Q7Z4H8 507 aa18.53■□□□□ 0.56
COL9A3-205ENST00000466192 TMEM150AQ86TG1 271 aa18.53■□□□□ 0.56
COL9A3-205ENST00000466192 C10orf82Q8WW14 230 aa18.53■□□□□ 0.56
COL9A3-205ENST00000466192 WBP2Q969T9 261 aa18.53■□□□□ 0.56
COL9A3-205ENST00000466192 PLD4Q96BZ4 506 aa18.53■□□□□ 0.56
COL9A3-205ENST00000466192 IMP4Q96G21 291 aaKnown RBP18.53■□□□□ 0.56
COL9A3-205ENST00000466192 AGAP2Q99490 1192 aa18.53■□□□□ 0.56
COL9A3-205ENST00000466192 ATXN3LQ9H3M9 355 aa18.53■□□□□ 0.56
COL9A3-205ENST00000466192 ENTPD7Q9NQZ7 604 aa18.53■□□□□ 0.56
COL9A3-205ENST00000466192 DCTN4Q9UJW0 460 aa18.53■□□□□ 0.56
COL9A3-205ENST00000466192 ZFP37Q9Y6Q3 630 aaPredicted RBP18.53■□□□□ 0.56
COL9A3-205ENST00000466192 CCDC78A2IDD5 438 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 LILRB3O75022 631 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 DNAJC8O75937 253 aaPredicted RBP18.52■□□□□ 0.56
COL9A3-205ENST00000466192 SPATA31D3P0C874 917 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 IHHQ14623 411 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 POU6F1Q14863 301 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 HSP90AA5PQ58FG0 334 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 TEDDM1Q5T9Z0 273 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 SPATA31D4Q6ZUB0 917 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 ATXN7L3BQ96GX2 97 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 PRICKLE1Q96MT3 831 aaPredicted RBP18.52■□□□□ 0.56
COL9A3-205ENST00000466192 CPNE1Q99829 537 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 FSD1LQ9BXM9 530 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 IL23AQ9NPF7 189 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 MMP2P08253 660 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 LINC00271P0C7V0 271 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 TROVE2P10155 538 aaKnown RBP eCLIP18.52■□□□□ 0.56
COL9A3-205ENST00000466192 CORO1AP31146 461 aaKnown RBP18.52■□□□□ 0.56
COL9A3-205ENST00000466192 PPM1AP35813 382 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 GP5P40197 560 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 CHRNA4P43681 627 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 WNT3AP56704 352 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 RPS24P62847 133 aaKnown RBP18.52■□□□□ 0.56
COL9A3-205ENST00000466192 ITKQ08881 620 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 BNIP1Q12981 228 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 MPP3Q13368 585 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 PDE1CQ14123 709 aaPredicted RBP18.52■□□□□ 0.56
COL9A3-205ENST00000466192 PCSK7Q16549 785 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 PCID2Q5JVF3 399 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 SWT1Q5T5J6 900 aaKnown RBP18.52■□□□□ 0.56
COL9A3-205ENST00000466192 PGBD5Q8N414 524 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 OR52K2Q8NGK3 314 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 KLF16Q9BXK1 252 aaPredicted RBP18.52■□□□□ 0.56
COL9A3-205ENST00000466192 C20orf96Q9NUD7 363 aaPredicted RBP18.52■□□□□ 0.56
COL9A3-205ENST00000466192 CHKBQ9Y259 395 aa18.52■□□□□ 0.56
COL9A3-205ENST00000466192 A0A0D9SEW6 157 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 TTC24A2A3L6 582 aaPredicted RBP18.51■□□□□ 0.55
COL9A3-205ENST00000466192 H3BNC9 293 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 FGF18O76093 207 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 IRF1P10914 325 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 ALDH3A1P30838 453 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 CD86P42081 329 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 IRX4P78413 519 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 DSC2Q02487 901 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 TNK2Q07912 1038 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 PKN3Q6P5Z2 889 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 STRA8Q7Z7C7 330 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 KCNMB4Q86W47 210 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 CNPY4Q8N129 248 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 RFWD2Q8NHY2 731 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 AZIN2Q96A70 460 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 LRRC37BQ96QE4 947 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 ECT2Q9H8V3 914 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 ZNF334Q9HCZ1 680 aaPredicted RBP18.51■□□□□ 0.55
COL9A3-205ENST00000466192 SLC40A1Q9NP59 571 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 PCDHB12Q9Y5F1 795 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 CCDC195A0A1B0GUA6 201 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 CARNS1A5YM72 827 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 ZBBXA8MT70 800 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 GOLGA8TH3BQL2 631 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 PRAMEF11O60813 436 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 ETFBP38117 255 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 SGSHP51688 502 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 EPHB3P54753 998 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 SETDB1Q15047 1291 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 GRTP1Q5TC63 336 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 NUDCD3Q8IVD9 361 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 NSMCE1Q8WV22 266 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 ERP27Q96DN0 273 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 MYCBPQ99417 103 aaPredicted RBP18.51■□□□□ 0.55
COL9A3-205ENST00000466192 ZBP1Q9H171 429 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 MYLK2Q9H1R3 596 aa18.51■□□□□ 0.55
COL9A3-205ENST00000466192 AGO1Q9UL18 857 aaKnown RBP18.51■□□□□ 0.55
COL9A3-205ENST00000466192 ALPK3Q96L96 1907 aa18.5■□□□□ 0.55
COL9A3-205ENST00000466192 A0A0G2JND7 137 aa18.5■□□□□ 0.55
COL9A3-205ENST00000466192 PPP3CCP48454 512 aa18.5■□□□□ 0.55
COL9A3-205ENST00000466192 CDH4P55283 916 aa18.5■□□□□ 0.55
COL9A3-205ENST00000466192 NCALDP61601 193 aa18.5■□□□□ 0.55
COL9A3-205ENST00000466192 CCDC15Q0P6D6 951 aa18.5■□□□□ 0.55
COL9A3-205ENST00000466192 LBRQ14739 615 aaKnown RBP18.5■□□□□ 0.55
COL9A3-205ENST00000466192 C16orf46Q6P387 395 aa18.5■□□□□ 0.55
COL9A3-205ENST00000466192 CCDC117Q8IWD4 279 aaPredicted RBP18.5■□□□□ 0.55
COL9A3-205ENST00000466192 ACMSDQ8TDX5 336 aa18.5■□□□□ 0.55
COL9A3-205ENST00000466192 SLC22A12Q96S37 553 aa18.5■□□□□ 0.55
COL9A3-205ENST00000466192 CYP2S1Q96SQ9 504 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms