RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 FAM172BPA6NC97 362 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 PLEKHD1A6NEE1 506 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 MBD3L5A6NJ08 208 aaPredicted RBP2.37□□□□□ -2.03
CCDC93-205ENST00000466171 KDM4EB2RXH2 506 aaPredicted RBP2.37□□□□□ -2.03
CCDC93-205ENST00000466171 RASA4BC9J798 803 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 PRAC2D3DTV9 90 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 RASA4O43374 803 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 RPP40O75818 363 aaKnown RBP2.37□□□□□ -2.03
CCDC93-205ENST00000466171 HARSP12081 509 aaKnown RBP2.37□□□□□ -2.03
CCDC93-205ENST00000466171 AKT1P31749 480 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 HTR3AP46098 478 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 TM4SF4P48230 202 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 TRAPPC10P48553 1259 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 CRIP2P52943 208 aaPredicted RBP2.37□□□□□ -2.03
CCDC93-205ENST00000466171 ZBTB16Q05516 673 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 ARL16Q0P5N6 197 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 ST3GAL1Q11201 340 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 ILF3Q12906 894 aaKnown RBP eCLIP2.37□□□□□ -2.03
CCDC93-205ENST00000466171 DLG1Q12959 904 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 DMP1Q13316 513 aaPredicted RBP2.37□□□□□ -2.03
CCDC93-205ENST00000466171 PMS2P11Q13670 270 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 TRIM14Q14142 442 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 XKR9Q5GH70 373 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 TMEM268Q5VZI3 342 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 HIBCHQ6NVY1 386 aaPredicted RBP2.37□□□□□ -2.03
CCDC93-205ENST00000466171 PATL1Q86TB9 770 aaKnown RBP2.37□□□□□ -2.03
CCDC93-205ENST00000466171 MYLK4Q86YV6 388 aaPredicted RBP2.37□□□□□ -2.03
CCDC93-205ENST00000466171 OR2C3Q8N628 320 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 WDSUB1Q8N9V3 476 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 TEX45Q8NA69 505 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 SPATA20Q8TB22 786 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 POF1BQ8WVV4 589 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 FAR1Q8WVX9 515 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 BRI3BPQ8WY22 251 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 ZNF385AQ96PM9 386 aaKnown RBP2.37□□□□□ -2.03
CCDC93-205ENST00000466171 GDF15Q99988 308 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 MMP28Q9H239 520 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 GAREM1Q9H706 876 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 EVA1AQ9H8M9 152 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 PTPRHQ9HD43 1115 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 ARFGAP3Q9NP61 516 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 LRCH1Q9Y2L9 728 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 PAM16Q9Y3D7 125 aa2.37□□□□□ -2.03
CCDC93-205ENST00000466171 KIF28PB7ZC32 967 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 PCDH17O14917 1159 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 CCNT1O60563 726 aaKnown RBP2.36□□□□□ -2.03
CCDC93-205ENST00000466171 PAK4O96013 591 aaPredicted RBP2.36□□□□□ -2.03
CCDC93-205ENST00000466171 CKMT1AP12532 417 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 PPM1AP35813 382 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 RPL3P39023 403 aaKnown RBP2.36□□□□□ -2.03
CCDC93-205ENST00000466171 TECP42680 631 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 MXI1P50539 228 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 RCAN1P53805 252 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 BTKQ06187 659 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 SF3A3Q12874 501 aaKnown RBP eCLIP2.36□□□□□ -2.03
CCDC93-205ENST00000466171 MYBPC2Q14324 1141 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 CALCRLQ16602 461 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 GRAMD1BQ3KR37 738 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 IZUMO3Q5VZ72 239 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 ANO1Q5XXA6 986 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 CCDC174Q6PII3 467 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 TUBA1AQ71U36 451 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 ZNF771Q7L3S4 317 aaPredicted RBP2.36□□□□□ -2.03
CCDC93-205ENST00000466171 TMC8Q8IU68 726 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 SMC5Q8IY18 1101 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 SYTL1Q8IYJ3 562 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 ENAHQ8N8S7 591 aaPredicted RBP2.36□□□□□ -2.03
CCDC93-205ENST00000466171 DEPTORQ8TB45 409 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 CLEC4CQ8WTT0 213 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 HDAC7Q8WUI4 952 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 HMGB4Q8WW32 186 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 OR1F2PQ96R84 312 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 NPAS1Q99742 590 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 TUBA1CQ9BQE3 449 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 CRB3Q9BUF7 120 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 TRIM31Q9BZY9 425 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 Q9N2J8 555 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 LIN7CQ9NUP9 197 aaKnown RBP2.36□□□□□ -2.03
CCDC93-205ENST00000466171 TCF19Q9Y242 345 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 SLC45A1Q9Y2W3 748 aa2.36□□□□□ -2.03
CCDC93-205ENST00000466171 MST1RQ04912 1400 aa2.35□□□□□ -2.03
CCDC93-205ENST00000466171 FAM72CH0Y354 149 aa2.35□□□□□ -2.03
CCDC93-205ENST00000466171 TULP2O00295 520 aa2.35□□□□□ -2.03
CCDC93-205ENST00000466171 IFRD1O00458 451 aaPredicted RBP2.35□□□□□ -2.03
CCDC93-205ENST00000466171 XPNPEP2O43895 674 aa2.35□□□□□ -2.03
CCDC93-205ENST00000466171 NBNO60934 754 aa2.35□□□□□ -2.03
CCDC93-205ENST00000466171 TCEA3O75764 348 aa2.35□□□□□ -2.03
CCDC93-205ENST00000466171 EIF3JO75822 258 aaKnown RBP2.35□□□□□ -2.03
CCDC93-205ENST00000466171 FGF18O76093 207 aa2.35□□□□□ -2.03
CCDC93-205ENST00000466171 CLDN7O95471 211 aa2.35□□□□□ -2.03
CCDC93-205ENST00000466171 CRYAAP02489 173 aa2.35□□□□□ -2.03
CCDC93-205ENST00000466171 FCGR2AP12318 317 aa2.35□□□□□ -2.03
CCDC93-205ENST00000466171 NPPBP16860 134 aa2.35□□□□□ -2.03
CCDC93-205ENST00000466171 EEF1GP26641 437 aaKnown RBP2.35□□□□□ -2.03
CCDC93-205ENST00000466171 FAM3BP58499 235 aaPredicted RBP2.35□□□□□ -2.03
CCDC93-205ENST00000466171 ALKBH1Q13686 389 aaKnown RBP2.35□□□□□ -2.03
CCDC93-205ENST00000466171 CTTNQ14247 550 aaKnown RBP2.35□□□□□ -2.03
CCDC93-205ENST00000466171 DHX8Q14562 1220 aaKnown RBP2.35□□□□□ -2.03
CCDC93-205ENST00000466171 STARD3Q14849 445 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms