RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 PDFQ9HBH1 243 aa18.82■□□□□ 0.6
SCAMP3-204ENST00000465312 DYRK4Q9NR20 520 aa18.82■□□□□ 0.6
SCAMP3-204ENST00000465312 SAE1Q9UBE0 346 aaPredicted RBP18.82■□□□□ 0.6
SCAMP3-204ENST00000465312 SEPT3Q9UH03 358 aa18.82■□□□□ 0.6
SCAMP3-204ENST00000465312 IL36AQ9UHA7 158 aa18.82■□□□□ 0.6
SCAMP3-204ENST00000465312 NCKAP1Q9Y2A7 1128 aa18.82■□□□□ 0.6
SCAMP3-204ENST00000465312 CXorf51AA0A1B0GTR3 108 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 KPNA3O00505 521 aaPredicted RBP18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 MAFKO60675 156 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 ZNF217O75362 1048 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 RPP40O75818 363 aaKnown RBP18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 TJP3O95049 919 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 CD160O95971 181 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 ADH1BP00325 375 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 TDGF1P13385 188 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 HOXA6P31267 233 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 CHRNA3P32297 505 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 RPS14P62263 151 aaKnown RBP18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 SLC10A2Q12908 348 aaPredicted RBP18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 SRSF5Q13243 272 aaKnown RBP18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 RFTN1Q14699 578 aaPredicted RBP18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 CYTH1Q15438 398 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 CST6Q15828 149 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 MARC1Q5VT66 337 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 FAM46CQ5VWP2 391 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 DPY19L3Q6ZPD9 716 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 ZC3H18Q86VM9 953 aaKnown RBP18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 CCDC13Q8IYE1 715 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 SLC35F6Q8N357 371 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 CHST14Q8NCH0 376 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 OR2A12Q8NGT7 310 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 PIP4K2CQ8TBX8 421 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 ISG20Q96AZ6 181 aaKnown RBP18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 ZNF599Q96NL3 588 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 OMDQ99983 421 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 HEPHQ9BQS7 1158 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 RSPH9Q9H1X1 276 aaPredicted RBP18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 HAUS2Q9NVX0 235 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 RAPGEFL1Q9UHV5 662 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 PCDHGA2Q9Y5H1 932 aa18.81■□□□□ 0.6
SCAMP3-204ENST00000465312 CCDC163A0A0D9SF12 145 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 H7C0C1 242 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 ENC1O14682 589 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 MCF2LO15068 1137 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 ALOX15BO15296 676 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 MID1O15344 667 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 GSRP00390 522 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 PRNPP04156 253 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 PECAM1P16284 738 aaPredicted RBP18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 SLC8A1P32418 973 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 MMP13P45452 471 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 ATP5OP48047 213 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 RENBPP51606 427 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 SLC10A7Q0GE19 358 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 SFSWAPQ12872 951 aaKnown RBP18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 TAZQ16635 292 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 ARSIQ5FYB1 569 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 BBS12Q6ZW61 710 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 B4GALNT4Q76KP1 1039 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 UBE2Q2Q8WVN8 375 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 HDAC11Q96DB2 347 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 FAM129BQ96TA1 746 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 LGMNQ99538 433 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 CD248Q9HCU0 757 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 NT5MQ9NPB1 228 aa18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 EVLQ9UI08 416 aaPredicted RBP18.8■□□□□ 0.6
SCAMP3-204ENST00000465312 A0A1W2PP55 124 aa18.79■□□□□ 0.6
SCAMP3-204ENST00000465312 APOC4-APOC2K7ER74 178 aa18.79■□□□□ 0.6
SCAMP3-204ENST00000465312 NDUFS2O75306 463 aa18.79■□□□□ 0.6
SCAMP3-204ENST00000465312 RNASEH2AO75792 299 aaKnown RBP18.79■□□□□ 0.6
SCAMP3-204ENST00000465312 APOC2P02655 101 aa18.79■□□□□ 0.6
SCAMP3-204ENST00000465312 CCNCP24863 283 aa18.79■□□□□ 0.6
SCAMP3-204ENST00000465312 GKP32189 559 aa18.79■□□□□ 0.6
SCAMP3-204ENST00000465312 NR2C2P49116 596 aa18.79■□□□□ 0.6
SCAMP3-204ENST00000465312 ADCY2Q08462 1091 aa18.79■□□□□ 0.6
SCAMP3-204ENST00000465312 CFAP58Q5T655 872 aa18.79■□□□□ 0.6
SCAMP3-204ENST00000465312 DCAF12L1Q5VU92 463 aa18.79■□□□□ 0.6
SCAMP3-204ENST00000465312 HDDC3Q8N4P3 179 aa18.79■□□□□ 0.6
SCAMP3-204ENST00000465312 FAM160A2Q8N612 972 aaPredicted RBP18.79■□□□□ 0.6
SCAMP3-204ENST00000465312 TSEN2Q8NCE0 465 aaKnown RBP18.79■□□□□ 0.6
SCAMP3-204ENST00000465312 PPP1R16AQ96I34 528 aa18.79■□□□□ 0.6
SCAMP3-204ENST00000465312 FAM118BQ9BPY3 351 aa18.79■□□□□ 0.6
SCAMP3-204ENST00000465312 PABPC3Q9H361 631 aaKnown RBP18.79■□□□□ 0.6
SCAMP3-204ENST00000465312 CD93Q9NPY3 652 aa18.79■□□□□ 0.6
SCAMP3-204ENST00000465312 FBXL12Q9NXK8 326 aa18.79■□□□□ 0.6
SCAMP3-204ENST00000465312 LHX3Q9UBR4 397 aa18.79■□□□□ 0.6
SCAMP3-204ENST00000465312 RAB23Q9ULC3 237 aa18.79■□□□□ 0.6
SCAMP3-204ENST00000465312 MATN3O15232 486 aa18.78■□□□□ 0.6
SCAMP3-204ENST00000465312 LEFTY1O75610 366 aa18.78■□□□□ 0.6
SCAMP3-204ENST00000465312 POP4O95707 220 aaKnown RBP18.78■□□□□ 0.6
SCAMP3-204ENST00000465312 CCNB1P14635 433 aa18.78■□□□□ 0.6
SCAMP3-204ENST00000465312 C5AR1P21730 350 aa18.78■□□□□ 0.6
SCAMP3-204ENST00000465312 CNR2P34972 360 aa18.78■□□□□ 0.6
SCAMP3-204ENST00000465312 PTPN7P35236 360 aa18.78■□□□□ 0.6
SCAMP3-204ENST00000465312 SCNN1BP51168 640 aa18.78■□□□□ 0.6
SCAMP3-204ENST00000465312 MAXP61244 160 aa18.78■□□□□ 0.6
SCAMP3-204ENST00000465312 GNG11P61952 73 aa18.78■□□□□ 0.6
SCAMP3-204ENST00000465312 OTUD4Q01804 1114 aaKnown RBP18.78■□□□□ 0.6
SCAMP3-204ENST00000465312 ZBTB16Q05516 673 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms