RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 MEI4A8MW99 385 aa17.82■□□□□ 0.44
CPSF4-209ENST00000465132 SH3BP5O60239 455 aa17.82■□□□□ 0.44
CPSF4-209ENST00000465132 SYNCRIPO60506 623 aaKnown RBP17.82■□□□□ 0.44
CPSF4-209ENST00000465132 ATP5BP06576 529 aaKnown RBP17.82■□□□□ 0.44
CPSF4-209ENST00000465132 NDST2P52849 883 aa17.82■□□□□ 0.44
CPSF4-209ENST00000465132 GEMIN4P57678 1058 aaKnown RBP17.82■□□□□ 0.44
CPSF4-209ENST00000465132 DPYSL3Q14195 570 aa17.82■□□□□ 0.44
CPSF4-209ENST00000465132 PPP2R5EQ16537 467 aa17.82■□□□□ 0.44
CPSF4-209ENST00000465132 CA9Q16790 459 aa17.82■□□□□ 0.44
CPSF4-209ENST00000465132 ZNF423Q2M1K9 1284 aa17.82■□□□□ 0.44
CPSF4-209ENST00000465132 PARP15Q460N3 678 aa17.82■□□□□ 0.44
CPSF4-209ENST00000465132 ANKRD20A8PQ5CZ79 823 aa17.82■□□□□ 0.44
CPSF4-209ENST00000465132 SEL1L2Q5TEA6 688 aa17.82■□□□□ 0.44
CPSF4-209ENST00000465132 UMODL1-AS1Q8N2C9 162 aa17.82■□□□□ 0.44
CPSF4-209ENST00000465132 CHCHD4Q8N4Q1 142 aa17.82■□□□□ 0.44
CPSF4-209ENST00000465132 CADM4Q8NFZ8 388 aa17.82■□□□□ 0.44
CPSF4-209ENST00000465132 SIPA1Q96FS4 1042 aa17.82■□□□□ 0.44
CPSF4-209ENST00000465132 CAMK1GQ96NX5 476 aa17.82■□□□□ 0.44
CPSF4-209ENST00000465132 C2orf49Q9BVC5 232 aaPredicted RBP17.82■□□□□ 0.44
CPSF4-209ENST00000465132 GPR174Q9BXC1 333 aa17.82■□□□□ 0.44
CPSF4-209ENST00000465132 MUC3BQ9H195 1237 aa17.82■□□□□ 0.44
CPSF4-209ENST00000465132 CARD9Q9H257 536 aa17.82■□□□□ 0.44
CPSF4-209ENST00000465132 GOLPH3Q9H4A6 298 aa17.82■□□□□ 0.44
CPSF4-209ENST00000465132 MPP6Q9NZW5 540 aa17.82■□□□□ 0.44
CPSF4-209ENST00000465132 ASPMQ8IZT6 3477 aa17.82■□□□□ 0.44
CPSF4-209ENST00000465132 A0A1B0GTW7 788 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 FAM72CH0Y354 149 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 RAMP2O60895 175 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 TJP3O95049 919 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 ASLP04424 464 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 ERCC2P18074 760 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 MX2P20592 715 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 PTPN7P35236 360 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 GGCXP38435 758 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 PEX5P50542 639 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 TPMTP51580 245 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 ARSEP51690 589 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 GRIK2Q13002 908 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 DPYSQ14117 519 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 ZNF234Q14588 700 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 POLD3Q15054 466 aaPredicted RBP17.81■□□□□ 0.44
CPSF4-209ENST00000465132 TRIP6Q15654 476 aaKnown RBP17.81■□□□□ 0.44
CPSF4-209ENST00000465132 FAM72AQ5TYM5 149 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 TXNRD3NBQ6F5E7 133 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 FAM72DQ6L9T8 149 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 RAB44Q7Z6P3 723 aaPredicted RBP17.81■□□□□ 0.44
CPSF4-209ENST00000465132 FAM72BQ86X60 149 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.81■□□□□ 0.44
CPSF4-209ENST00000465132 MAIP1Q8WWC4 291 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 SORCS1Q8WY21 1168 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 TSC1Q92574 1164 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 RNF25Q96BH1 459 aaPredicted RBP17.81■□□□□ 0.44
CPSF4-209ENST00000465132 FAF2Q96CS3 445 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 RNF157Q96PX1 679 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 NAP1L3Q99457 506 aaPredicted RBP17.81■□□□□ 0.44
CPSF4-209ENST00000465132 ZDHHC5Q9C0B5 715 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 CIPCQ9C0C6 399 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 HAUS2Q9NVX0 235 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 GGA2Q9UJY4 613 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 SNX10Q9Y5X0 201 aa17.81■□□□□ 0.44
CPSF4-209ENST00000465132 CTAGE9A4FU28 777 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 ZSCAN5CA6NGD5 496 aaPredicted RBP17.8■□□□□ 0.44
CPSF4-209ENST00000465132 ARHGAP42A6NI28 874 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 APOL1O14791 398 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 IGLV3-19P01714 112 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 PABPC1P11940 636 aaKnown RBP17.8■□□□□ 0.44
CPSF4-209ENST00000465132 POLR2EP19388 210 aaKnown RBP17.8■□□□□ 0.44
CPSF4-209ENST00000465132 PRKCHP24723 683 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 OXTRP30559 389 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 NNMTP40261 264 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 NR2C2P49116 596 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 PLK1P53350 603 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 COPAP53621 1224 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 ATP13A4Q4VNC1 1196 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 ALFQ53S48 1182 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 CCDC181Q5TID7 509 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 TMEM215Q68D42 235 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 SPOCD1Q6ZMY3 1216 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 TFAP2DQ7Z6R9 452 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 ZSCAN30Q86W11 494 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 NLRP14Q86W24 1093 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 RFX6Q8HWS3 928 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 NAXDQ8IW45 347 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 ZCCHC9Q8N567 271 aaKnown RBP17.8■□□□□ 0.44
CPSF4-209ENST00000465132 RAPGEF5Q92565 580 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 PRCCQ92733 491 aaPredicted RBP17.8■□□□□ 0.44
CPSF4-209ENST00000465132 PBKQ96KB5 322 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 FERMT1Q9BQL6 677 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 VPS28Q9UK41 221 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 PLA2G4CQ9UP65 541 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 FAM208BQ5VWN6 2430 aa17.8■□□□□ 0.44
CPSF4-209ENST00000465132 METTL12A8MUP2 240 aa17.79■□□□□ 0.44
CPSF4-209ENST00000465132 CNTN5O94779 1100 aa17.79■□□□□ 0.44
CPSF4-209ENST00000465132 EPHX1P07099 455 aa17.79■□□□□ 0.44
CPSF4-209ENST00000465132 TGM2P21980 687 aa17.79■□□□□ 0.44
CPSF4-209ENST00000465132 CDKN2BP42772 138 aa17.79■□□□□ 0.44
CPSF4-209ENST00000465132 SGSHP51688 502 aa17.79■□□□□ 0.44
CPSF4-209ENST00000465132 GNA12Q03113 381 aa17.79■□□□□ 0.44
CPSF4-209ENST00000465132 SLC20A2Q08357 652 aa17.79■□□□□ 0.44
CPSF4-209ENST00000465132 TMCO4Q5TGY1 634 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms