RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 CXorf51AA0A1B0GTR3 108 aa23.22■■□□□ 1.31
USP42-205ENST00000465073 FFAR2O15552 330 aa23.22■■□□□ 1.31
USP42-205ENST00000465073 MT-CO3P00414 261 aa23.22■■□□□ 1.31
USP42-205ENST00000465073 CKMT1AP12532 417 aa23.22■■□□□ 1.31
USP42-205ENST00000465073 ADRB3P13945 408 aa23.22■■□□□ 1.31
USP42-205ENST00000465073 ITPKBP27987 946 aa23.22■■□□□ 1.31
USP42-205ENST00000465073 NOMO3P69849 1222 aa23.22■■□□□ 1.31
USP42-205ENST00000465073 NAA35Q5VZE5 725 aa23.22■■□□□ 1.31
USP42-205ENST00000465073 ZSCAN30Q86W11 494 aa23.22■■□□□ 1.31
USP42-205ENST00000465073 FGF11Q92914 225 aa23.22■■□□□ 1.31
USP42-205ENST00000465073 SLC17A9Q9BYT1 436 aa23.22■■□□□ 1.31
USP42-205ENST00000465073 FAM170AA1A519 330 aa23.21■■□□□ 1.31
USP42-205ENST00000465073 NEMP2A6NFY4 417 aa23.21■■□□□ 1.31
USP42-205ENST00000465073 F8VZ95 297 aa23.21■■□□□ 1.31
USP42-205ENST00000465073 AP1G1O43747 822 aa23.21■■□□□ 1.31
USP42-205ENST00000465073 MMEP08473 750 aa23.21■■□□□ 1.31
USP42-205ENST00000465073 ETFBP38117 255 aa23.21■■□□□ 1.31
USP42-205ENST00000465073 ARF5P84085 180 aa23.21■■□□□ 1.31
USP42-205ENST00000465073 MAPK8IP2Q13387 824 aaPredicted RBP23.21■■□□□ 1.31
USP42-205ENST00000465073 PLPP6Q8IY26 295 aa23.21■■□□□ 1.31
USP42-205ENST00000465073 DRC7Q8IY82 874 aa23.21■■□□□ 1.31
USP42-205ENST00000465073 SLC22A18ASQ8N1D0 253 aa23.21■■□□□ 1.31
USP42-205ENST00000465073 ISG20Q96AZ6 181 aaKnown RBP23.21■■□□□ 1.31
USP42-205ENST00000465073 BMFQ96LC9 184 aa23.21■■□□□ 1.31
USP42-205ENST00000465073 RETREG1Q9H6L5 497 aa23.21■■□□□ 1.31
USP42-205ENST00000465073 NLGN3Q9NZ94 848 aa23.21■■□□□ 1.31
USP42-205ENST00000465073 FADS3Q9Y5Q0 445 aa23.21■■□□□ 1.31
USP42-205ENST00000465073 BRINP1O60477 761 aa23.2■■□□□ 1.3
USP42-205ENST00000465073 GIMD1P0DJR0 217 aa23.2■■□□□ 1.3
USP42-205ENST00000465073 ACTN2P35609 894 aa23.2■■□□□ 1.3
USP42-205ENST00000465073 CCNHP51946 323 aaPredicted RBP23.2■■□□□ 1.3
USP42-205ENST00000465073 HNRNPKP61978 463 aaKnown RBP eCLIP23.2■■□□□ 1.3
USP42-205ENST00000465073 ATP11AP98196 1134 aa23.2■■□□□ 1.3
USP42-205ENST00000465073 NRG1Q02297 640 aaPredicted RBP23.2■■□□□ 1.3
USP42-205ENST00000465073 KYAT3Q6YP21 454 aaKnown RBP23.2■■□□□ 1.3
USP42-205ENST00000465073 ZNF677Q86XU0 584 aa23.2■■□□□ 1.3
USP42-205ENST00000465073 EPS8L1Q8TE68 723 aa23.2■■□□□ 1.3
USP42-205ENST00000465073 UBL7Q96S82 380 aaPredicted RBP23.2■■□□□ 1.3
USP42-205ENST00000465073 GPR27Q9NS67 375 aa23.2■■□□□ 1.3
USP42-205ENST00000465073 DNAJC28Q9NX36 388 aa23.2■■□□□ 1.3
USP42-205ENST00000465073 OR12D3Q9UGF7 316 aa23.2■■□□□ 1.3
USP42-205ENST00000465073 FCF1Q9Y324 198 aaKnown RBP23.2■■□□□ 1.3
USP42-205ENST00000465073 SCAMP1O15126 338 aa23.19■■□□□ 1.3
USP42-205ENST00000465073 PAK4O96013 591 aaPredicted RBP23.19■■□□□ 1.3
USP42-205ENST00000465073 FGL2Q14314 439 aa23.19■■□□□ 1.3
USP42-205ENST00000465073 ARL13BQ3SXY8 428 aa23.19■■□□□ 1.3
USP42-205ENST00000465073 TMC6Q7Z403 805 aa23.19■■□□□ 1.3
USP42-205ENST00000465073 PTAR1Q7Z6K3 402 aaPredicted RBP23.19■■□□□ 1.3
USP42-205ENST00000465073 FAM181AQ8N9Y4 354 aa23.19■■□□□ 1.3
USP42-205ENST00000465073 DUSP23Q9BVJ7 150 aa23.19■■□□□ 1.3
USP42-205ENST00000465073 PRORYQ9H606 182 aa23.19■■□□□ 1.3
USP42-205ENST00000465073 USP29Q9HBJ7 922 aa23.19■■□□□ 1.3
USP42-205ENST00000465073 METTL5Q9NRN9 209 aaKnown RBP23.19■■□□□ 1.3
USP42-205ENST00000465073 EVA1BQ9NVM1 165 aa23.19■■□□□ 1.3
USP42-205ENST00000465073 HECAQ9UBI9 543 aaPredicted RBP23.19■■□□□ 1.3
USP42-205ENST00000465073 MYLKQ15746 1914 aa23.19■■□□□ 1.3
USP42-205ENST00000465073 POM121BA6NF01 834 aa23.18■■□□□ 1.3
USP42-205ENST00000465073 OPA1O60313 960 aa23.18■■□□□ 1.3
USP42-205ENST00000465073 GP1BAP07359 652 aa23.18■■□□□ 1.3
USP42-205ENST00000465073 EEF1GP26641 437 aaKnown RBP23.18■■□□□ 1.3
USP42-205ENST00000465073 ADRA1BP35368 520 aa23.18■■□□□ 1.3
USP42-205ENST00000465073 DUSP3P51452 185 aaPredicted RBP23.18■■□□□ 1.3
USP42-205ENST00000465073 GEMIN4P57678 1058 aaKnown RBP23.18■■□□□ 1.3
USP42-205ENST00000465073 SGCGQ13326 291 aa23.18■■□□□ 1.3
USP42-205ENST00000465073 TCP11X2Q5H9J9 407 aa23.18■■□□□ 1.3
USP42-205ENST00000465073 CT47A1Q5JQC4 288 aaPredicted RBP23.18■■□□□ 1.3
USP42-205ENST00000465073 KDM7AQ6ZMT4 941 aa23.18■■□□□ 1.3
USP42-205ENST00000465073 EMC1Q8N766 993 aa23.18■■□□□ 1.3
USP42-205ENST00000465073 RAB7BQ96AH8 199 aa23.18■■□□□ 1.3
USP42-205ENST00000465073 APOLD1Q96LR9 279 aa23.18■■□□□ 1.3
USP42-205ENST00000465073 LENG8Q96PV6 779 aaPredicted RBP23.18■■□□□ 1.3
USP42-205ENST00000465073 ZDHHC6Q9H6R6 413 aa23.18■■□□□ 1.3
USP42-205ENST00000465073 SAMSN1Q9NSI8 373 aaKnown RBP23.18■■□□□ 1.3
USP42-205ENST00000465073 NOCTQ9UK39 431 aaKnown RBP23.18■■□□□ 1.3
USP42-205ENST00000465073 SPTY2D1-AS1A0A0U1RR47 76 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 RAD51BO15315 384 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 TSPAN6O43657 245 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 CD160O95971 181 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 MMP8P22894 467 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 RABIFP47224 123 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 MAPKAPK2P49137 400 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 FZD2Q14332 565 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 ZNF542PQ5EBM4 170 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 MANEALQ5VSG8 457 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 CDCP2Q5VXM1 449 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 RWDD4Q6NW29 188 aaKnown RBP23.17■■□□□ 1.3
USP42-205ENST00000465073 PARS2Q7L3T8 475 aaKnown RBP23.17■■□□□ 1.3
USP42-205ENST00000465073 C1QTNF2Q9BXJ5 285 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 OSBPL2Q9H1P3 480 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 HPCAL4Q9UM19 191 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 DOCK4Q8N1I0 1966 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 K7ESM1 405 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 CSF2P04141 144 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 RHOQP17081 205 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 SDC4P31431 198 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 ACVRL1P37023 503 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 CDR2Q01850 454 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 TBC1D25Q3MII6 688 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 RXFP2Q8WXD0 754 aa23.17■■□□□ 1.3
USP42-205ENST00000465073 ASB12Q8WXK4 309 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms