RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 CARNMT1Q8N4J0 409 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 LMCD1Q9NZU5 365 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 LIMD1Q9UGP4 676 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 VPS28Q9UK41 221 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 BLOC1S6Q9UL45 172 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 C5P01031 1676 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 ROBO1Q9Y6N7 1651 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 EVPLLA8MZ36 301 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 CXCL11O14625 94 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 FFAR3O14843 346 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 GPR42O15529 346 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 STRNO43815 780 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 ARIH2O95376 493 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 POU1F1P28069 291 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 ASPAP45381 313 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 POLD3Q15054 466 aaPredicted RBP9.19□□□□□ -0.94
HPS4-208ENST00000464362 PGS1Q32NB8 556 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 RAB6CQ53S08 254 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 CLEC6AQ6EIG7 209 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 FSTL4Q6MZW2 842 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 C16orf59Q7L2K0 433 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 ARHGAP22Q7Z5H3 698 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 ADCK2Q7Z695 626 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 KBTBD2Q8IY47 623 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 FNIP1Q8TF40 1166 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 MTFMTQ96DP5 389 aaKnown RBP9.19□□□□□ -0.94
HPS4-208ENST00000464362 PRR11Q96HE9 360 aaPredicted RBP9.19□□□□□ -0.94
HPS4-208ENST00000464362 FBXL18Q96ME1 805 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 ADAM2Q99965 735 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 RAB6CQ9H0N0 254 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 EBF3Q9H4W6 596 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 PDZD7Q9H5P4 517 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 ACTR8Q9H981 624 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 CDH22Q9UJ99 828 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 MYRFQ9Y2G1 1151 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 RAP2CQ9Y3L5 183 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 ALS2Q96Q42 1657 aa9.19□□□□□ -0.94
HPS4-208ENST00000464362 MYO1DO94832 1006 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 CPSF4O95639 269 aaKnown RBP9.18□□□□□ -0.94
HPS4-208ENST00000464362 SLC2A3P11169 496 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 HGFP14210 728 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 SERPINH1P50454 418 aaKnown RBP9.18□□□□□ -0.94
HPS4-208ENST00000464362 OXCT1P55809 520 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 LSM3P62310 102 aaKnown RBP9.18□□□□□ -0.94
HPS4-208ENST00000464362 IL5RAQ01344 420 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 CCDC15Q0P6D6 951 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 BFSP2Q13515 415 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 PCID2Q5JVF3 399 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 PLPPR4Q7Z2D5 763 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 HORMAD1Q86X24 394 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 TDRPQ86YL5 185 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 DDHD1Q8NEL9 900 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 ESAMQ96AP7 390 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 DTNBP1Q96EV8 351 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 SEMA3CQ99985 751 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 SLC25A23Q9BV35 468 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 CDH19Q9H159 772 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 ADAM7Q9H2U9 754 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 S100A14Q9HCY8 104 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 VPS45Q9NRW7 570 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 SPASTQ9UBP0 616 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 PPM1HQ9ULR3 514 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 PCDHGC3Q9UN70 934 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 EFR3BQ9Y2G0 817 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 MFHAS1Q9Y4C4 1052 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 KCNU1A8MYU2 1149 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 ZNF197O14709 1029 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 CKMP06732 381 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 CRABP2P29373 138 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 ATP6V1E1P36543 226 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 TMED10P49755 219 aaKnown RBP9.18□□□□□ -0.94
HPS4-208ENST00000464362 AQP4P55087 323 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 ROR2Q01974 943 aaKnown RBP9.18□□□□□ -0.94
HPS4-208ENST00000464362 NUMA1Q14980 2115 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 FAM171A1Q5VUB5 890 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 ARMC3Q5W041 872 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 TSHZ1Q6ZSZ6 1077 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 KIAA2013Q8IYS2 634 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 CDYL2Q8N8U2 506 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 DCAKDQ8WVC6 231 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 SEC14L1Q92503 715 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 GLMNQ92990 594 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 SIKE1Q9BRV8 207 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 CLPBQ9H078 707 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 ARMC7Q9H6L4 198 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 VTI1BQ9UEU0 232 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 MYH3P11055 1940 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 GPR182O15218 404 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 LDLRP01130 860 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 LINC00032P0C843 101 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 SMIM10L2AP0DMW4 78 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 SMIM10L2BP0DMW5 78 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 VCLP18206 1134 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 TPP2P29144 1249 aaPredicted RBP9.18□□□□□ -0.94
HPS4-208ENST00000464362 CHRNA4P43681 627 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 PSEN2P49810 448 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 WNT3AP56704 352 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 RAB10P61026 200 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 DDR2Q16832 855 aa9.18□□□□□ -0.94
HPS4-208ENST00000464362 SAMD4BQ5PRF9 694 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms