RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 SCML4Q8N228 414 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 PPM1NQ8N819 430 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 RNF139Q8WU17 664 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 SMARCD2Q92925 531 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 TTC17Q96AE7 1141 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 E2F7Q96AV8 911 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 ELSPBP1Q96BH3 223 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 CFAP36Q96G28 342 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 LRFN3Q9BTN0 628 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 TSSK1BQ9BXA7 367 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 TRIM55Q9BYV6 548 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 BRD8Q9H0E9 1235 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 TASP1Q9H6P5 420 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 LRRC4Q9HBW1 653 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 NOD2Q9HC29 1040 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 CSNK1G1Q9HCP0 422 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 CNGB3Q9NQW8 809 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 WNT16Q9UBV4 365 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 LNPEPQ9UIQ6 1025 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 PLLPQ9Y342 182 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 SHROOM3Q8TF72 1996 aa10.1□□□□□ -0.79
PTPRD-207ENST00000463477 TMEM221A6NGB7 291 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 SDR42E2A6NKP2 422 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 M0R296 226 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 CLDN5O00501 218 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 DCLK1O15075 740 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 BIRC5O15392 142 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 NCAM2O15394 837 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 MFSD11O43934 449 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 ATP5BP06576 529 aaKnown RBP10.09□□□□□ -0.79
PTPRD-207ENST00000463477 FCARP24071 287 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 DDX6P26196 483 aaKnown RBP eCLIP10.09□□□□□ -0.79
PTPRD-207ENST00000463477 CRHR1P34998 444 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 SERPINB4P48594 390 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 KCNJ2P63252 427 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 SF3A3Q12874 501 aaKnown RBP eCLIP10.09□□□□□ -0.79
PTPRD-207ENST00000463477 SEMA3BQ13214 749 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 PREPLQ4J6C6 727 aaPredicted RBP10.09□□□□□ -0.79
PTPRD-207ENST00000463477 ARHGAP15Q53QZ3 475 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 FAXCQ5TGI0 409 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 NLRP9Q7RTR0 991 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 FAM35AQ86V20 835 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 FAM131BQ86XD5 332 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 ARID3BQ8IVW6 561 aaPredicted RBP10.09□□□□□ -0.79
PTPRD-207ENST00000463477 SIX6OS1Q8N1H7 587 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 ZSCAN18Q8TBC5 510 aaPredicted RBP10.09□□□□□ -0.79
PTPRD-207ENST00000463477 ERP27Q96DN0 273 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 STAMBPL1Q96FJ0 436 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 SMARCD1Q96GM5 515 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 GCNAQ96QF7 691 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 SRPK1Q96SB4 655 aaKnown RBP10.09□□□□□ -0.79
PTPRD-207ENST00000463477 TTLL2Q9BWV7 592 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 IQCGQ9H095 443 aaKnown RBP10.09□□□□□ -0.79
PTPRD-207ENST00000463477 SMOC2Q9H3U7 446 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 SLC2A4RGQ9NR83 387 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 TMEM30AQ9NV96 361 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 IL37Q9NZH6 218 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 GGT7Q9UJ14 662 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 MAGED2Q9UNF1 606 aaPredicted RBP10.09□□□□□ -0.79
PTPRD-207ENST00000463477 MTO1Q9Y2Z2 717 aaKnown RBP10.09□□□□□ -0.79
PTPRD-207ENST00000463477 NUP205Q92621 2012 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 CXorf49A8MYA2 514 aaPredicted RBP10.09□□□□□ -0.79
PTPRD-207ENST00000463477 GOLGA8RI6L899 631 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 MTSS1O43312 755 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 NARSO43776 548 aaKnown RBP10.09□□□□□ -0.79
PTPRD-207ENST00000463477 F9P00740 461 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 KRT16P08779 473 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 PPP3CCP48454 512 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 CACNA2D1P54289 1103 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 DAOAP59103 153 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 DEUP1Q05D60 604 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 NIPAL4Q0D2K0 466 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 DCAF6Q58WW2 860 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 GPR158Q5T848 1215 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 ATG16L1Q676U5 607 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 BEND5Q7L4P6 421 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 MON1AQ86VX9 555 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 MFSD6LQ8IWD5 586 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 CTAGE3PQ8IX95 158 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 NUP93Q8N1F7 819 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 ST13P5Q8NFI4 369 aaPredicted RBP10.09□□□□□ -0.79
PTPRD-207ENST00000463477 CFAP61Q8NHU2 1237 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 IRGQQ8WZA9 623 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 FAM149B1Q96BN6 582 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 OXNAD1Q96HP4 312 aaPredicted RBP10.09□□□□□ -0.79
PTPRD-207ENST00000463477 C7orf26Q96N11 449 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 FAM111AQ96PZ2 611 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 KCNK16Q96T55 309 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 MED10Q9BTT4 135 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 SLC46A2Q9BY10 475 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 PLA2G2FQ9BZM2 168 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 DMAP1Q9NPF5 467 aaPredicted RBP10.09□□□□□ -0.79
PTPRD-207ENST00000463477 SMYD2Q9NRG4 433 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 COMMD8Q9NX08 183 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 OBP2AQ9NY56 170 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 SIRPGQ9P1W8 387 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 ZDBF2Q9HCK1 2354 aa10.09□□□□□ -0.79
PTPRD-207ENST00000463477 ERI2A8K979 691 aaKnown RBP10.08□□□□□ -0.8
PTPRD-207ENST00000463477 M0QYT0 321 aa10.08□□□□□ -0.8
PTPRD-207ENST00000463477 RNF103O00237 685 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms