RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ZNF449Q6P9G9 518 aa13□□□□□ -0.33
VAPB-203ENST00000463370 ZCCHC23Q6ZST2 131 aa13□□□□□ -0.33
VAPB-203ENST00000463370 OTOP2Q7RTS6 562 aa13□□□□□ -0.33
VAPB-203ENST00000463370 SPNS2Q8IVW8 549 aa13□□□□□ -0.33
VAPB-203ENST00000463370 DENND6AQ8IWF6 608 aa13□□□□□ -0.33
VAPB-203ENST00000463370 TEX26Q8N6G2 289 aa13□□□□□ -0.33
VAPB-203ENST00000463370 PNPLA1Q8N8W4 532 aa13□□□□□ -0.33
VAPB-203ENST00000463370 OR7D4Q8NG98 312 aa13□□□□□ -0.33
VAPB-203ENST00000463370 ARRDC2Q8TBH0 407 aa13□□□□□ -0.33
VAPB-203ENST00000463370 SLC22A12Q96S37 553 aa13□□□□□ -0.33
VAPB-203ENST00000463370 C20orf27Q9GZN8 174 aa13□□□□□ -0.33
VAPB-203ENST00000463370 TMEM51Q9NW97 253 aa13□□□□□ -0.33
VAPB-203ENST00000463370 SMPD4Q9NXE4 827 aa13□□□□□ -0.33
VAPB-203ENST00000463370 SIRPGQ9P1W8 387 aa13□□□□□ -0.33
VAPB-203ENST00000463370 CHKBQ9Y259 395 aa13□□□□□ -0.33
VAPB-203ENST00000463370 CHD7Q9P2D1 2997 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 VAPBO95292 243 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 TIMP1P01033 207 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 GLDCP23378 1020 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 ALDH1A3P47895 512 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 GJA8P48165 433 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 ARCN1P48444 511 aaKnown RBP12.99□□□□□ -0.33
VAPB-203ENST00000463370 KPNA1P52294 538 aaPredicted RBP12.99□□□□□ -0.33
VAPB-203ENST00000463370 IRF9Q00978 393 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 MPP3Q13368 585 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 PARP15Q460N3 678 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 PLD6Q8N2A8 252 aaKnown RBP12.99□□□□□ -0.33
VAPB-203ENST00000463370 MYRFLQ96LU7 910 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 CYP2S1Q96SQ9 504 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 HERC2P3Q9BVR0 1158 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 C11orf49Q9H6J7 331 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 ENTPD7Q9NQZ7 604 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 TRPM5Q9NZQ8 1165 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 TCAF1Q9Y4C2 921 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 C2orf71A6NGG8 1288 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 HOXD9P28356 352 aaPredicted RBP12.99□□□□□ -0.33
VAPB-203ENST00000463370 TYK2P29597 1187 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 CORO1AP31146 461 aaKnown RBP12.99□□□□□ -0.33
VAPB-203ENST00000463370 HARS2P49590 506 aaKnown RBP12.99□□□□□ -0.33
VAPB-203ENST00000463370 ZXDBP98169 803 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 BST1Q10588 318 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 SEPT6Q14141 434 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 CHI3L2Q15782 390 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 CNGA3Q16281 694 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 PDZD8Q8NEN9 1154 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 OVCA2Q8WZ82 227 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 FATE1Q969F0 183 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 PDFQ9HBH1 243 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 RXFP1Q9HBX9 757 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 ZNF334Q9HCZ1 680 aaPredicted RBP12.99□□□□□ -0.33
VAPB-203ENST00000463370 ATP13A1Q9HD20 1204 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 SPG21Q9NZD8 308 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 TMEM216Q9P0N5 145 aa12.99□□□□□ -0.33
VAPB-203ENST00000463370 PRRG1O14668 218 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 TEX28O15482 410 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 TSPAN3O60637 253 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 PRAMEF11O60813 436 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 BPGMP07738 259 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 RFC2P35250 354 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 SPRP35270 261 aaPredicted RBP12.98□□□□□ -0.33
VAPB-203ENST00000463370 MAGEA12P43365 314 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 MAPKAPK2P49137 400 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 MPP1Q00013 466 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 IL10RBQ08334 325 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 CTBP1Q13363 440 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 MSLNQ13421 630 aaPredicted RBP12.98□□□□□ -0.33
VAPB-203ENST00000463370 RAB33AQ14088 237 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 LBRQ14739 615 aaKnown RBP12.98□□□□□ -0.33
VAPB-203ENST00000463370 C5orf22Q49AR2 442 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 FBXW10Q5XX13 1052 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 TPGS2Q68CL5 300 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 DNAJB7Q7Z6W7 309 aaPredicted RBP12.98□□□□□ -0.33
VAPB-203ENST00000463370 NUDCD3Q8IVD9 361 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 ACMSDQ8TDX5 336 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 ISL2Q96A47 359 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 NSMCE3Q96MG7 304 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 CDK5RAP1Q96SZ6 601 aaKnown RBP12.98□□□□□ -0.33
VAPB-203ENST00000463370 MYLK2Q9H1R3 596 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 KCNK13Q9HB14 408 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 TREX1Q9NSU2 369 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 UXTQ9UBK9 157 aaPredicted RBP12.98□□□□□ -0.33
VAPB-203ENST00000463370 AGO1Q9UL18 857 aaKnown RBP12.98□□□□□ -0.33
VAPB-203ENST00000463370 AP3B1O00203 1094 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 PLIN3O60664 434 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 AHSGP02765 367 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 URODP06132 367 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 TMPRSS15P98073 1019 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 GRM3Q14832 879 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 TAF12Q16514 161 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 PDPK2PQ6A1A2 396 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 KLHDC10Q6PID8 442 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 POTEHQ6S545 545 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 ATG14Q6ZNE5 492 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 DDX53Q86TM3 631 aaKnown RBP12.98□□□□□ -0.33
VAPB-203ENST00000463370 MFSD6LQ8IWD5 586 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 PPHLN1Q8NEY8 458 aaKnown RBP12.98□□□□□ -0.33
VAPB-203ENST00000463370 TADA1Q96BN2 335 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 VPS39Q96JC1 886 aa12.98□□□□□ -0.33
VAPB-203ENST00000463370 ZFRQ96KR1 1074 aaKnown RBP12.98□□□□□ -0.33
VAPB-203ENST00000463370 CEP295NLQ96MC4 621 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms