RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 IER2Q9BTL4 223 aa5.95□□□□□ -1.46
VPS36-202ENST00000462289 DCLK3Q9C098 648 aa5.95□□□□□ -1.46
VPS36-202ENST00000462289 LINC00597Q9H2U6 94 aa5.95□□□□□ -1.46
VPS36-202ENST00000462289 SLITRK6Q9H5Y7 841 aa5.95□□□□□ -1.46
VPS36-202ENST00000462289 CD248Q9HCU0 757 aa5.95□□□□□ -1.46
VPS36-202ENST00000462289 GCM1Q9NP62 436 aa5.95□□□□□ -1.46
VPS36-202ENST00000462289 ANLNQ9NQW6 1124 aa5.95□□□□□ -1.46
VPS36-202ENST00000462289 GKN1Q9NS71 199 aa5.95□□□□□ -1.46
VPS36-202ENST00000462289 ARHGEF38Q9NXL2 777 aa5.95□□□□□ -1.46
VPS36-202ENST00000462289 GTSE1Q9NYZ3 720 aa5.95□□□□□ -1.46
VPS36-202ENST00000462289 CFAP97Q9P2B7 532 aa5.95□□□□□ -1.46
VPS36-202ENST00000462289 AGO1Q9UL18 857 aaKnown RBP5.95□□□□□ -1.46
VPS36-202ENST00000462289 NAALADL1Q9UQQ1 740 aa5.95□□□□□ -1.46
VPS36-202ENST00000462289 SLC27A6Q9Y2P4 619 aa5.95□□□□□ -1.46
VPS36-202ENST00000462289 TNRC6BQ9UPQ9 1833 aaKnown RBP5.95□□□□□ -1.46
VPS36-202ENST00000462289 FAM186AA6NE01 2351 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 CXorf51AA0A1B0GTR3 108 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 KANSL1LA0AUZ9 987 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 TMEM191CA6NGB0 347 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 TMEM221A6NGB7 291 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 SPECC1L-ADORA2AF8WAN1 911 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 M0R296 226 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 MAN2B1O00754 1011 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 MSI1O43347 362 aaKnown RBP5.94□□□□□ -1.46
VPS36-202ENST00000462289 NUAK1O60285 661 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 CLSTN1O94985 981 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 NFATC1O95644 943 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 CYP1A2P05177 515 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 MYBL1P10243 752 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 MBL2P11226 248 aaPredicted RBP5.94□□□□□ -1.46
VPS36-202ENST00000462289 CHRNB1P11230 501 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 TDGF1P13385 188 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 NCAM1P13591 858 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 ARSAP15289 507 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 RRM1P23921 792 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 HOXD9P28356 352 aaPredicted RBP5.94□□□□□ -1.46
VPS36-202ENST00000462289 HOXA6P31267 233 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 RFC1P35251 1148 aaPredicted RBP5.94□□□□□ -1.46
VPS36-202ENST00000462289 MAGEA9P43362 315 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 NSFP46459 744 aaKnown RBP5.94□□□□□ -1.46
VPS36-202ENST00000462289 ZNF143P52747 638 aaPredicted RBP5.94□□□□□ -1.46
VPS36-202ENST00000462289 HDAC4P56524 1084 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 RNF4P78317 190 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 OGDHQ02218 1023 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 EFEMP1Q12805 493 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 ASIC2Q16515 512 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 CCDC14Q49A88 953 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 BRMS1LQ5PSV4 323 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 ADGRF1Q5T601 910 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 BTBD8Q5XKL5 378 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 ZNF605Q86T29 641 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 UNC45BQ8IWX7 931 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 SUGP1Q8IWZ8 645 aaKnown RBP5.94□□□□□ -1.46
VPS36-202ENST00000462289 CCDC105Q8IYK2 499 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 SYNPOQ8N3V7 929 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 ARFGAP1Q8N6T3 406 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 PJA1Q8NG27 643 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 JOSD2Q8TAC2 188 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 FAM71BQ8TC56 605 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 IPO4Q8TEX9 1081 aaKnown RBP5.94□□□□□ -1.46
VPS36-202ENST00000462289 NTAN1Q96AB6 310 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 PDLIM2Q96JY6 352 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 ZFYVE19Q96K21 471 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 BTN2A3PQ96KV6 586 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 C1orf74Q96LT6 269 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 PRICKLE1Q96MT3 831 aaPredicted RBP5.94□□□□□ -1.46
VPS36-202ENST00000462289 NELL2Q99435 816 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 CHP1Q99653 195 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 C11orf70Q9BRQ4 267 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 C1QTNF1Q9BXJ1 281 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 KRTAP4-11Q9BYQ6 195 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 TRIM5Q9C035 493 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.94□□□□□ -1.46
VPS36-202ENST00000462289 EBF3Q9H4W6 596 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 RETREG1Q9H6L5 497 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 BRD9Q9H8M2 597 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 FBRSL1Q9HCM7 1045 aaKnown RBP5.94□□□□□ -1.46
VPS36-202ENST00000462289 TRPC7Q9HCX4 862 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 LTB4R2Q9NPC1 389 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 SPHK2Q9NRA0 654 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 ST7Q9NRC1 585 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 HEBP1Q9NRV9 189 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 PIGVQ9NUD9 493 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.94□□□□□ -1.46
VPS36-202ENST00000462289 THG1LQ9NWX6 298 aaKnown RBP5.94□□□□□ -1.46
VPS36-202ENST00000462289 DUS2Q9NX74 493 aaKnown RBP5.94□□□□□ -1.46
VPS36-202ENST00000462289 ADAM22Q9P0K1 906 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 IMPACTQ9P2X3 320 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 VTI1BQ9UEU0 232 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 ADAMTS1Q9UHI8 967 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 SFMBT1Q9UHJ3 866 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 GPR160Q9UJ42 338 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 NUDT5Q9UKK9 219 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 INTUQ9ULD6 942 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 WNT6Q9Y6F9 365 aa5.94□□□□□ -1.46
VPS36-202ENST00000462289 SHROOM3Q8TF72 1996 aa5.93□□□□□ -1.46
VPS36-202ENST00000462289 ANKRD62A6NC57 917 aa5.93□□□□□ -1.46
VPS36-202ENST00000462289 DRGXA6NNA5 263 aa5.93□□□□□ -1.46
VPS36-202ENST00000462289 C10orf142B7Z368 130 aa5.93□□□□□ -1.46
VPS36-202ENST00000462289 AKR1B15C9JRZ8 316 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms