RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 ZNF597Q96LX8 424 aa18.71■□□□□ 0.58
HPS3-204ENST00000462030 CIDEBQ9UHD4 219 aa18.71■□□□□ 0.58
HPS3-204ENST00000462030 FIS1Q9Y3D6 152 aa18.71■□□□□ 0.58
HPS3-204ENST00000462030 AP4S1Q9Y587 144 aa18.71■□□□□ 0.58
HPS3-204ENST00000462030 ARHGEF37A1IGU5 675 aa18.7■□□□□ 0.58
HPS3-204ENST00000462030 XPO1O14980 1071 aaKnown RBP18.7■□□□□ 0.58
HPS3-204ENST00000462030 ZNF23P17027 643 aa18.7■□□□□ 0.58
HPS3-204ENST00000462030 HDCP19113 662 aa18.7■□□□□ 0.58
HPS3-204ENST00000462030 NDUFV1P49821 464 aa18.7■□□□□ 0.58
HPS3-204ENST00000462030 TXNL4AP83876 142 aaKnown RBP18.7■□□□□ 0.58
HPS3-204ENST00000462030 NOL9Q5SY16 702 aaKnown RBP18.7■□□□□ 0.58
HPS3-204ENST00000462030 SPNS2Q8IVW8 549 aa18.7■□□□□ 0.58
HPS3-204ENST00000462030 MYO1HQ8N1T3 1032 aa18.7■□□□□ 0.58
HPS3-204ENST00000462030 TRIML2Q8N7C3 387 aa18.7■□□□□ 0.58
HPS3-204ENST00000462030 HMGCLL1Q8TB92 370 aa18.7■□□□□ 0.58
HPS3-204ENST00000462030 HSFY1Q96LI6 401 aa18.7■□□□□ 0.58
HPS3-204ENST00000462030 FAM210AQ96ND0 272 aa18.7■□□□□ 0.58
HPS3-204ENST00000462030 NPY6RQ99463 290 aa18.7■□□□□ 0.58
HPS3-204ENST00000462030 GBA3Q9H227 469 aa18.7■□□□□ 0.58
HPS3-204ENST00000462030 RHOJQ9H4E5 214 aa18.7■□□□□ 0.58
HPS3-204ENST00000462030 RSL24D1Q9UHA3 163 aaKnown RBP18.7■□□□□ 0.58
HPS3-204ENST00000462030 I6L893 689 aaPredicted RBP18.69■□□□□ 0.58
HPS3-204ENST00000462030 LGALS2P05162 132 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 GNL1P36915 607 aaPredicted RBP18.69■□□□□ 0.58
HPS3-204ENST00000462030 ADARP55265 1226 aaKnown RBP18.69■□□□□ 0.58
HPS3-204ENST00000462030 DCTN2Q13561 401 aaKnown RBP18.69■□□□□ 0.58
HPS3-204ENST00000462030 ADRM1Q16186 407 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 MTX3Q5HYI7 312 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 HFE2Q6ZVN8 426 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 NXNL1Q96CM4 212 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 SNX27Q96L92 541 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 SLC29A1Q99808 456 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 TRPV6Q9H1D0 765 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 GMEB1Q9Y692 573 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 SPTLC1O15269 473 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 PGK1P00558 417 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 C8BP07358 591 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 PRKAA2P54646 552 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 COG7P83436 770 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 PPIDQ08752 370 aaKnown RBP18.69■□□□□ 0.58
HPS3-204ENST00000462030 PDAP1Q13442 181 aaKnown RBP18.69■□□□□ 0.58
HPS3-204ENST00000462030 SLC12A1Q13621 1099 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 TRIM25Q14258 630 aaKnown RBP18.69■□□□□ 0.58
HPS3-204ENST00000462030 C9orf57Q5W0N0 161 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 GADL1Q6ZQY3 521 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 CARM1Q86X55 608 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 CEP97Q8IW35 865 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 CRYBG2Q8N1P7 616 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 LRRC52Q8N7C0 313 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 IRGQQ8WZA9 623 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 SLCO4A1Q96BD0 722 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 SGF29Q96ES7 293 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 MAELQ96JY0 434 aaKnown RBP18.69■□□□□ 0.58
HPS3-204ENST00000462030 CAAP1Q9H8G2 361 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 THEGQ9P2T0 379 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 SUCOQ9UBS9 1254 aaKnown RBP18.69■□□□□ 0.58
HPS3-204ENST00000462030 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.69■□□□□ 0.58
HPS3-204ENST00000462030 RALGAPA2Q2PPJ7 1873 aa18.69■□□□□ 0.58
HPS3-204ENST00000462030 NFKBIEO00221 500 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 PLOD2O00469 737 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 CNMDO75829 334 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 BEST1O76090 585 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 AHSGP02765 367 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 ZNF286BP0CG31 522 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 MPP1Q00013 466 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 ZBTB6Q15916 424 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 BNIPLQ7Z465 357 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 MFSD6LQ8IWD5 586 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 SNX31Q8N9S9 440 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 STON2Q8WXE9 905 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 NT5C3BQ969T7 300 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 TMEM79Q9BSE2 394 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 HAUS8Q9BT25 410 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 EIF2AQ9BY44 585 aaKnown RBP18.68■□□□□ 0.58
HPS3-204ENST00000462030 CHCHD3Q9NX63 227 aaKnown RBP18.68■□□□□ 0.58
HPS3-204ENST00000462030 SNX13Q9Y5W8 968 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 CLDN5O00501 218 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 H6PDO95479 791 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 CCDC166P0CW27 439 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 HSPA1AP0DMV8 641 aaKnown RBP18.68■□□□□ 0.58
HPS3-204ENST00000462030 HSPA1BP0DMV9 641 aaKnown RBP18.68■□□□□ 0.58
HPS3-204ENST00000462030 NOS2P35228 1153 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 ALDH3B2P48448 385 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 NPY2RP49146 381 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 VGLL4Q14135 290 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 FAM219BQ5XKK7 198 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 CYP2R1Q6VVX0 501 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 APOBEC3FQ8IUX4 373 aaKnown RBP18.68■□□□□ 0.58
HPS3-204ENST00000462030 DENND6AQ8IWF6 608 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 PELI3Q8N2H9 469 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 BEST2Q8NFU1 509 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 LPGAT1Q92604 370 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 ABTB1Q969K4 478 aaPredicted RBP18.68■□□□□ 0.58
HPS3-204ENST00000462030 GPR78Q96P69 363 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 MPHOSPH6Q99547 160 aaKnown RBP18.68■□□□□ 0.58
HPS3-204ENST00000462030 CIB1Q99828 191 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 GTSE1Q9NYZ3 720 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 TSC2P49815 1807 aa18.68■□□□□ 0.58
HPS3-204ENST00000462030 TANC1Q9C0D5 1861 aa18.67■□□□□ 0.58
HPS3-204ENST00000462030 MAGEB3O15480 346 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms