RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 PRKACBP22694 351 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 HTR7P34969 479 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 BMPR1AP36894 532 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 ETFBP38117 255 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 KPNA1P52294 538 aaPredicted RBP10.56□□□□□ -0.72
HERC4-207ENST00000460168 DSTNP60981 165 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 HSPA14Q0VDF9 509 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 SKIDA1Q1XH10 827 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 CARNMT1Q8N4J0 409 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 NPWQ8N729 165 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 ATP6V0D2Q8N8Y2 350 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 OR2W6PQ8NHA6 318 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 SP7Q8TDD2 431 aaPredicted RBP10.56□□□□□ -0.72
HERC4-207ENST00000460168 PRCCQ92733 491 aaPredicted RBP10.56□□□□□ -0.72
HERC4-207ENST00000460168 BTN2A3PQ96KV6 586 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 MYRFLQ96LU7 910 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 FOXP3Q9BZS1 431 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 KLC2Q9H0B6 622 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 CDC42EP4Q9H3Q1 356 aaKnown RBP10.56□□□□□ -0.72
HERC4-207ENST00000460168 RXFP1Q9HBX9 757 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 IL1RAPL1Q9NZN1 696 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 SCHIP1Q9P0W5 487 aaPredicted RBP10.56□□□□□ -0.72
HERC4-207ENST00000460168 FARP1Q9Y4F1 1045 aaPredicted RBP10.56□□□□□ -0.72
HERC4-207ENST00000460168 NR2E3Q9Y5X4 410 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 RAD54BQ9Y620 910 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 RANBP2P49792 3224 aaKnown RBP10.56□□□□□ -0.72
HERC4-207ENST00000460168 LAMA3Q16787 3333 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 ZNF840PA6NDX5 716 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 FGF10O15520 208 aaPredicted RBP10.56□□□□□ -0.72
HERC4-207ENST00000460168 TGM5O43548 720 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 RNASEH2AO75792 299 aaKnown RBP10.56□□□□□ -0.72
HERC4-207ENST00000460168 VAV1P15498 845 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 MX2P20592 715 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 TUBP50607 506 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 MLLT6P55198 1093 aaPredicted RBP10.56□□□□□ -0.72
HERC4-207ENST00000460168 SP140Q13342 867 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 SLC29A2Q14542 456 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 HECTD3Q5T447 861 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 SYCP2LQ5T4T6 812 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 DEPDC1Q5TB30 811 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 PIK3R6Q5UE93 754 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 DUS1LQ6P1R4 473 aaKnown RBP10.56□□□□□ -0.72
HERC4-207ENST00000460168 DNAJB7Q7Z6W7 309 aaPredicted RBP10.56□□□□□ -0.72
HERC4-207ENST00000460168 TP53INP2Q8IXH6 220 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 PAF1Q8N7H5 531 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 TRMT2BQ96GJ1 504 aaKnown RBP10.56□□□□□ -0.72
HERC4-207ENST00000460168 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.56□□□□□ -0.72
HERC4-207ENST00000460168 UXTQ9UBK9 157 aaPredicted RBP10.56□□□□□ -0.72
HERC4-207ENST00000460168 LNPEPQ9UIQ6 1025 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 VANGL2Q9ULK5 521 aa10.56□□□□□ -0.72
HERC4-207ENST00000460168 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.55□□□□□ -0.72
HERC4-207ENST00000460168 RASA4BC9J798 803 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 HAT1O14929 419 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 RIPK2O43353 540 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 GCATO75600 419 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 ACSL3O95573 720 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 CDC25CP30307 473 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 RING1Q06587 406 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 SPIDRQ14159 915 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 PRKD1Q15139 912 aaPredicted RBP10.55□□□□□ -0.72
HERC4-207ENST00000460168 HIF1AQ16665 826 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 MS4A13Q5J8X5 152 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 MANEALQ5VSG8 457 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 SNX30Q5VWJ9 437 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 ANKRD22Q5VYY1 191 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 PLPP4Q5VZY2 271 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 LRIG3Q6UXM1 1119 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 C4orf22Q6V702 233 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 TRMT10CQ7L0Y3 403 aaKnown RBP10.55□□□□□ -0.72
HERC4-207ENST00000460168 ITIH5Q86UX2 942 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 NAT8LQ8N9F0 302 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 PSMG2Q969U7 264 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 P2RY11Q96G91 374 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 CELF6Q96J87 481 aaKnown RBP10.55□□□□□ -0.72
HERC4-207ENST00000460168 SPACA7Q96KW9 195 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 FAM167BQ9BTA0 163 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 EMILIN2Q9BXX0 1053 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 FAM192AQ9GZU8 254 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 MOCS1Q9NZB8 636 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 MPP6Q9NZW5 540 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 NEU3Q9UQ49 428 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 RWDD3Q9Y3V2 267 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 CHD7Q9P2D1 2997 aa10.55□□□□□ -0.72
HERC4-207ENST00000460168 C5orf60A6NFR6 353 aa10.54□□□□□ -0.72
HERC4-207ENST00000460168 H0YC42 278 aa10.54□□□□□ -0.72
HERC4-207ENST00000460168 KCNK1O00180 336 aa10.54□□□□□ -0.72
HERC4-207ENST00000460168 RNF103O00237 685 aa10.54□□□□□ -0.72
HERC4-207ENST00000460168 COCHO43405 550 aa10.54□□□□□ -0.72
HERC4-207ENST00000460168 IGLV3-27P01718 113 aa10.54□□□□□ -0.72
HERC4-207ENST00000460168 LRG1P02750 347 aa10.54□□□□□ -0.72
HERC4-207ENST00000460168 APRTP07741 180 aa10.54□□□□□ -0.72
HERC4-207ENST00000460168 GSTA2P09210 222 aa10.54□□□□□ -0.72
HERC4-207ENST00000460168 GARSP41250 739 aaKnown RBP10.54□□□□□ -0.72
HERC4-207ENST00000460168 ACADVLP49748 655 aa10.54□□□□□ -0.72
HERC4-207ENST00000460168 TPD52P55327 224 aaPredicted RBP10.54□□□□□ -0.72
HERC4-207ENST00000460168 EIF3BP55884 814 aaKnown RBP10.54□□□□□ -0.72
HERC4-207ENST00000460168 AP2B1P63010 937 aa10.54□□□□□ -0.72
HERC4-207ENST00000460168 NRG1Q02297 640 aaPredicted RBP10.54□□□□□ -0.72
HERC4-207ENST00000460168 ANKRD20A2Q5SQ80 823 aa10.54□□□□□ -0.72
HERC4-207ENST00000460168 FAXCQ5TGI0 409 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms