RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	TAS2R38	P59533	333 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	ZBTB16	Q05516	673 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	IL10RB	Q08334	325 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	CNTN1	Q12860	1018 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	INO80D	Q53TQ3	878 aa	Predicted RBP	10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	ARSI	Q5FYB1	569 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	AGBL4	Q5VU57	503 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	DCAF12L1	Q5VU92	463 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	B4GALNT4	Q76KP1	1039 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	ARMCX6	Q7L4S7	300 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	VSIG1	Q86XK7	387 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	MAP7D3	Q8IWC1	876 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	PLPP6	Q8IY26	295 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	TSEN2	Q8NCE0	465 aa	Known RBP	10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	OR2AP1	Q8NGE2	309 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	KIAA1524	Q8TCG1	905 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	OLFM3	Q96PB7	478 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	ORAI3	Q9BRQ5	295 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	NEUROG2	Q9H2A3	272 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	SEMA4A	Q9H3S1	761 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	C6orf106	Q9H6K1	298 aa	Predicted RBP	10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	PARD6A	Q9NPB6	346 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	FBXL12	Q9NXK8	326 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	DDX56	Q9NY93	547 aa	Known RBP	10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	SAE1	Q9UBE0	346 aa	Predicted RBP	10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	EVL	Q9UI08	416 aa	Predicted RBP	10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	HPCAL4	Q9UM19	191 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	GUCA1B	Q9UMX6	200 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	PPP2R2C	Q9Y2T4	447 aa		10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	10.43	□□□□□ -0.74
MRPL55-223	ENST00000459783	ABCA7	Q8IZY2	2146 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	ATXN2	Q99700	1313 aa	Known RBP	10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	NUP205	Q92621	2012 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	LEFTY1	O75610	366 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	EPN2	O95208	641 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	DNTT	P04053	509 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	PYGM	P11217	842 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	C5AR1	P21730	350 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	GARS	P41250	739 aa	Known RBP	10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	NAP1L1	P55209	391 aa	Known RBP	10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	GEMIN4	P57678	1058 aa	Known RBP	10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	RHOA	P61586	193 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	DYNLT1	P63172	113 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	RPL6	Q02878	288 aa	Known RBP	10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	CCDC6	Q16204	474 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	MYLK3	Q32MK0	819 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	ZFYVE27	Q5T4F4	411 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	PIP5KL1	Q5T9C9	394 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	LAIR1	Q6GTX8	287 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	ZNF662	Q6ZS27	426 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	USP30	Q70CQ3	517 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	RFX6	Q8HWS3	928 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	REXO1L1P	Q8IX06	675 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	HDDC3	Q8N4P3	179 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	ATPAF2	Q8N5M1	289 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	TMIE	Q8NEW7	156 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	EXD1	Q8NHP7	514 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	CASKIN2	Q8WXE0	1202 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	MAML1	Q92585	1016 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	SPACA7	Q96KW9	195 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	TSGA13	Q96PP4	275 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	HEPH	Q9BQS7	1158 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	GPR174	Q9BXC1	333 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	SMOC1	Q9H4F8	434 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	ZDHHC6	Q9H6R6	413 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	SP110	Q9HB58	689 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	TMEM74B	Q9NUR3	256 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	DONSON	Q9NYP3	566 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	IL36A	Q9UHA7	158 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	NUMA1	Q14980	2115 aa		10.42	□□□□□ -0.74
MRPL55-223	ENST00000459783	BCLAF3	A2AJT9	711 aa	Known RBP	10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	PATE3	B3GLJ2	98 aa		10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	KPNA3	O00505	521 aa	Predicted RBP	10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	KRIT1	O00522	736 aa		10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	ZBTB24	O43167	697 aa	Predicted RBP	10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	GFRA3	O60609	400 aa		10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	RNASEH2A	O75792	299 aa	Known RBP	10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	ZRANB2	O95218	330 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	PIGN	O95427	931 aa		10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	ADH1B	P00325	375 aa		10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	IGHV4-34	P06331	123 aa		10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	CCDC175	P0C221	793 aa		10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	ACADM	P11310	421 aa		10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	CR2	P20023	1033 aa		10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	ITPKA	P23677	461 aa		10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	SERPINB6	P35237	376 aa		10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	ABL2	P42684	1182 aa		10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	ADPRH	P54922	357 aa		10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	PPP2CB	P62714	309 aa		10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	PPP2CA	P67775	309 aa		10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	ZNF211	Q13398	564 aa	Predicted RBP	10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	LBR	Q14739	615 aa	Known RBP	10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	TTC31	Q49AM3	519 aa	Predicted RBP	10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	TMCO4	Q5TGY1	634 aa		10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	PARS2	Q7L3T8	475 aa	Known RBP	10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	ZSWIM9	Q86XI8	627 aa		10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	RCOR2	Q8IZ40	523 aa		10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	RNF10	Q8N5U6	811 aa	Known RBP	10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	TEX26	Q8N6G2	289 aa		10.41	□□□□□ -0.74
MRPL55-223	ENST00000459783	HES6	Q96HZ4	224 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms